RNA–Protein interactions for RNA: ENST00000541897.5

MSRB3-211, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 3

Gene MSRB3, Length 489 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-211ENST00000541897 PELP1Q8IZL8 1130 aaKnown RBP26.88■■□□□ 1.89
MSRB3-211ENST00000541897 ARHGEF1Q92888 912 aaKnown RBP26.88■■□□□ 1.89
MSRB3-211ENST00000541897 ANXA1P04083 346 aa26.87■■□□□ 1.89
MSRB3-211ENST00000541897 MRPL50Q8N5N7 158 aaKnown RBP26.87■■□□□ 1.89
MSRB3-211ENST00000541897 RFC4P35249 363 aa26.86■■□□□ 1.89
MSRB3-211ENST00000541897 NARFQ9UHQ1 456 aa26.86■■□□□ 1.89
MSRB3-211ENST00000541897 TCERG1O14776 1098 aaKnown RBP26.85■■□□□ 1.89
MSRB3-211ENST00000541897 PHF14O94880 888 aa26.85■■□□□ 1.89
MSRB3-211ENST00000541897 COPS6Q7L5N1 327 aa26.85■■□□□ 1.89
MSRB3-211ENST00000541897 DZIP3Q86Y13 1208 aaKnown RBP26.85■■□□□ 1.89
MSRB3-211ENST00000541897 XAGE3Q8WTP9 111 aa26.85■■□□□ 1.89
MSRB3-211ENST00000541897 SMC4Q9NTJ3 1288 aa26.85■■□□□ 1.89
MSRB3-211ENST00000541897 C4AP0C0L4 1744 aa26.85■■□□□ 1.89
MSRB3-211ENST00000541897 ERVV-1B6SEH8 477 aa26.84■■□□□ 1.89
MSRB3-211ENST00000541897 PHAXQ9H814 394 aaKnown RBP26.84■■□□□ 1.89
MSRB3-211ENST00000541897 ZNF330Q9Y3S2 320 aaPredicted RBP26.84■■□□□ 1.89
MSRB3-211ENST00000541897 USP42Q9H9J4 1324 aaKnown RBP26.84■■□□□ 1.89
MSRB3-211ENST00000541897 FLIIQ13045 1269 aa26.83■■□□□ 1.89
MSRB3-211ENST00000541897 KIF6Q6ZMV9 814 aa26.83■■□□□ 1.89
MSRB3-211ENST00000541897 SMIM5Q71RC9 77 aa26.83■■□□□ 1.89
MSRB3-211ENST00000541897 DDX58O95786 925 aaKnown RBP26.82■■□□□ 1.88
MSRB3-211ENST00000541897 TTLL7Q6ZT98 887 aa26.82■■□□□ 1.88
MSRB3-211ENST00000541897 RCAN3Q9UKA8 241 aa26.82■■□□□ 1.88
MSRB3-211ENST00000541897 PTPRCP08575 1304 aa26.82■■□□□ 1.88
MSRB3-211ENST00000541897 MAP3K15Q6ZN16 1313 aa26.82■■□□□ 1.88
MSRB3-211ENST00000541897 KIF16BQ96L93 1317 aa26.82■■□□□ 1.88
MSRB3-211ENST00000541897 ZPR1O75312 459 aa26.81■■□□□ 1.88
MSRB3-211ENST00000541897 CAMTA2O94983 1202 aa26.81■■□□□ 1.88
MSRB3-211ENST00000541897 CLEC4GQ6UXB4 293 aa26.81■■□□□ 1.88
MSRB3-211ENST00000541897 G2E3Q7L622 706 aa26.81■■□□□ 1.88
MSRB3-211ENST00000541897 TBC1D2BQ9UPU7 963 aa26.81■■□□□ 1.88
MSRB3-211ENST00000541897 SCN7AQ01118 1682 aa26.8■■□□□ 1.88
MSRB3-211ENST00000541897 BCORQ6W2J9 1755 aa26.8■■□□□ 1.88
MSRB3-211ENST00000541897 AIMP1Q12904 312 aaKnown RBP26.8■■□□□ 1.88
MSRB3-211ENST00000541897 ANKRD13DQ6ZTN6 518 aa26.8■■□□□ 1.88
MSRB3-211ENST00000541897 PLBD2Q8NHP8 589 aa26.8■■□□□ 1.88
MSRB3-211ENST00000541897 BCL2L13Q9BXK5 485 aa26.8■■□□□ 1.88
MSRB3-211ENST00000541897 ARHGAP45Q92619 1136 aa26.78■■□□□ 1.88
MSRB3-211ENST00000541897 ZNF652Q9Y2D9 606 aa26.78■■□□□ 1.88
MSRB3-211ENST00000541897 BCAR3O75815 825 aa26.77■■□□□ 1.88
MSRB3-211ENST00000541897 USPL1Q5W0Q7 1092 aa26.77■■□□□ 1.88
MSRB3-211ENST00000541897 KSR2Q6VAB6 950 aa26.77■■□□□ 1.88
MSRB3-211ENST00000541897 GIGYF2Q6Y7W6 1299 aaKnown RBP26.77■■□□□ 1.88
MSRB3-211ENST00000541897 GYS1P13807 737 aa26.76■■□□□ 1.87
MSRB3-211ENST00000541897 YBX3P16989 372 aaKnown RBP eCLIP26.76■■□□□ 1.87
MSRB3-211ENST00000541897 FKBP5Q13451 457 aaPredicted RBP26.76■■□□□ 1.87
MSRB3-211ENST00000541897 BCL2L12Q9HB09 334 aa26.76■■□□□ 1.87
MSRB3-211ENST00000541897 SRP68Q9UHB9 627 aaKnown RBP26.76■■□□□ 1.87
MSRB3-211ENST00000541897 IPO8O15397 1037 aaKnown RBP26.75■■□□□ 1.87
MSRB3-211ENST00000541897 RIC3Q7Z5B4 369 aa26.75■■□□□ 1.87
MSRB3-211ENST00000541897 NLGN1Q8N2Q7 840 aa26.75■■□□□ 1.87
MSRB3-211ENST00000541897 PI4KAP2A4QPH2 592 aa26.74■■□□□ 1.87
MSRB3-211ENST00000541897 HSP90AB3PQ58FF7 597 aa26.74■■□□□ 1.87
MSRB3-211ENST00000541897 PI4KAP1Q8N8J0 262 aa26.74■■□□□ 1.87
MSRB3-211ENST00000541897 ZBTB3Q9H5J0 574 aa26.74■■□□□ 1.87
MSRB3-211ENST00000541897 NOB1Q9ULX3 412 aaKnown RBP26.74■■□□□ 1.87
MSRB3-211ENST00000541897 ATP10DQ9P241 1426 aa26.73■■□□□ 1.87
MSRB3-211ENST00000541897 ADCY9O60503 1353 aa26.73■■□□□ 1.87
MSRB3-211ENST00000541897 HLFQ16534 295 aa26.72■■□□□ 1.87
MSRB3-211ENST00000541897 API5Q9BZZ5 524 aaKnown RBP26.72■■□□□ 1.87
MSRB3-211ENST00000541897 MAP3K2Q9Y2U5 619 aa26.71■■□□□ 1.87
MSRB3-211ENST00000541897 ARFGEF2Q9Y6D5 1785 aa26.71■■□□□ 1.87
MSRB3-211ENST00000541897 TCIRG1Q13488 830 aa26.7■■□□□ 1.86
MSRB3-211ENST00000541897 FKBP8Q14318 412 aa26.7■■□□□ 1.86
MSRB3-211ENST00000541897 DNAAF4Q8WXU2 420 aa26.7■■□□□ 1.86
MSRB3-211ENST00000541897 METTL22Q9BUU2 404 aaPredicted RBP26.7■■□□□ 1.86
MSRB3-211ENST00000541897 CD2APQ9Y5K6 639 aa26.7■■□□□ 1.86
MSRB3-211ENST00000541897 TRIM28Q13263 835 aaKnown RBP26.69■■□□□ 1.86
MSRB3-211ENST00000541897 ZKSCAN2Q63HK3 967 aa26.69■■□□□ 1.86
MSRB3-211ENST00000541897 NUP98P52948 1817 aa26.69■■□□□ 1.86
MSRB3-211ENST00000541897 PXDNLA1KZ92 1463 aa26.68■■□□□ 1.86
MSRB3-211ENST00000541897 GRIN3BO60391 1043 aa26.68■■□□□ 1.86
MSRB3-211ENST00000541897 TM4SF1P30408 202 aa26.68■■□□□ 1.86
MSRB3-211ENST00000541897 ATF7IPQ6VMQ6 1270 aa26.68■■□□□ 1.86
MSRB3-211ENST00000541897 ZNF34Q8IZ26 560 aa26.68■■□□□ 1.86
MSRB3-211ENST00000541897 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.67■■□□□ 1.86
MSRB3-211ENST00000541897 FRAT1Q92837 279 aaPredicted RBP26.67■■□□□ 1.86
MSRB3-211ENST00000541897 ISCA1Q9BUE6 129 aa26.67■■□□□ 1.86
MSRB3-211ENST00000541897 IBTKQ9P2D0 1353 aaPredicted RBP26.67■■□□□ 1.86
MSRB3-211ENST00000541897 NEXNQ0ZGT2 675 aa26.66■■□□□ 1.86
MSRB3-211ENST00000541897 TBC1D9BQ66K14 1250 aa26.66■■□□□ 1.86
MSRB3-211ENST00000541897 ANKRD36CQ5JPF3 1778 aa26.66■■□□□ 1.86
MSRB3-211ENST00000541897 TRIM27P14373 513 aa26.65■■□□□ 1.86
MSRB3-211ENST00000541897 NFIXQ14938 502 aa26.65■■□□□ 1.86
MSRB3-211ENST00000541897 PARP10Q53GL7 1025 aa26.65■■□□□ 1.86
MSRB3-211ENST00000541897 NIP7Q9Y221 180 aaKnown RBP eCLIP26.65■■□□□ 1.86
MSRB3-211ENST00000541897 CARMIL3Q8ND23 1372 aa26.64■■□□□ 1.86
MSRB3-211ENST00000541897 F6X3S4 739 aa26.64■■□□□ 1.86
MSRB3-211ENST00000541897 MS4A1P11836 297 aa26.64■■□□□ 1.86
MSRB3-211ENST00000541897 LINS1Q8NG48 757 aa26.64■■□□□ 1.86
MSRB3-211ENST00000541897 SETDB2Q96T68 719 aa26.64■■□□□ 1.86
MSRB3-211ENST00000541897 MYD88Q99836 296 aa26.64■■□□□ 1.86
MSRB3-211ENST00000541897 BEND3Q5T5X7 828 aa26.63■■□□□ 1.85
MSRB3-211ENST00000541897 WWC3Q9ULE0 1092 aa26.63■■□□□ 1.85
MSRB3-211ENST00000541897 ABCC4O15439 1325 aa26.63■■□□□ 1.85
MSRB3-211ENST00000541897 CENPBP07199 599 aaPredicted RBP26.62■■□□□ 1.85
MSRB3-211ENST00000541897 C1QTNF8P60827 252 aa26.62■■□□□ 1.85
MSRB3-211ENST00000541897 CCDC191Q8NCU4 936 aa26.62■■□□□ 1.85
MSRB3-211ENST00000541897 IGKV5-2P06315 115 aa26.61■■□□□ 1.85
MSRB3-211ENST00000541897 NLRP10Q86W26 655 aa26.61■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 191.8 ms