RNA–Protein interactions for RNA: ENST00000541841.1

CIT-211, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-211ENST00000541841 HSH2DQ96JZ2 352 aa9.73□□□□□ -0.85
CIT-211ENST00000541841 GDF2Q9UK05 429 aaPredicted RBP9.73□□□□□ -0.85
CIT-211ENST00000541841 AMPD1P23109 780 aa9.72□□□□□ -0.85
CIT-211ENST00000541841 PCBP4P57723 403 aaKnown RBP9.72□□□□□ -0.85
CIT-211ENST00000541841 CDCA8Q53HL2 280 aa9.72□□□□□ -0.85
CIT-211ENST00000541841 KANK3Q6NY19 840 aa9.72□□□□□ -0.85
CIT-211ENST00000541841 LARP1Q6PKG0 1096 aaKnown RBP9.72□□□□□ -0.85
CIT-211ENST00000541841 PODNQ7Z5L7 613 aa9.72□□□□□ -0.85
CIT-211ENST00000541841 BEND7Q8N7W2 519 aaPredicted RBP9.72□□□□□ -0.85
CIT-211ENST00000541841 CHMP7Q8WUX9 453 aaPredicted RBP9.72□□□□□ -0.85
CIT-211ENST00000541841 PHACTR1Q9C0D0 580 aa9.72□□□□□ -0.85
CIT-211ENST00000541841 RBM19Q9Y4C8 960 aaKnown RBP9.72□□□□□ -0.85
CIT-211ENST00000541841 DPYDQ12882 1025 aa9.71□□□□□ -0.86
CIT-211ENST00000541841 PTK7Q13308 1070 aa9.71□□□□□ -0.86
CIT-211ENST00000541841 GPAT2Q6NUI2 795 aa9.71□□□□□ -0.86
CIT-211ENST00000541841 SLCO4C1Q6ZQN7 724 aa9.71□□□□□ -0.86
CIT-211ENST00000541841 SCG3Q8WXD2 468 aaKnown RBP9.71□□□□□ -0.86
CIT-211ENST00000541841 LRRC4BQ9NT99 713 aa9.71□□□□□ -0.86
CIT-211ENST00000541841 M0R2N6 131 aa9.7□□□□□ -0.86
CIT-211ENST00000541841 EFSO43281 561 aa9.7□□□□□ -0.86
CIT-211ENST00000541841 ARAFP10398 606 aa9.7□□□□□ -0.86
CIT-211ENST00000541841 SEC13P55735 322 aa9.7□□□□□ -0.86
CIT-211ENST00000541841 SFSWAPQ12872 951 aaKnown RBP9.7□□□□□ -0.86
CIT-211ENST00000541841 FCHSD1Q86WN1 690 aa9.7□□□□□ -0.86
CIT-211ENST00000541841 ZNF280CQ8ND82 737 aa9.7□□□□□ -0.86
CIT-211ENST00000541841 NGLY1Q96IV0 654 aa9.7□□□□□ -0.86
CIT-211ENST00000541841 HINFPQ9BQA5 517 aa9.7□□□□□ -0.86
CIT-211ENST00000541841 MARK1Q9P0L2 795 aa9.7□□□□□ -0.86
CIT-211ENST00000541841 PHF20L1A8MW92 1017 aa9.69□□□□□ -0.86
CIT-211ENST00000541841 USP17L15C9J2P7 530 aa9.69□□□□□ -0.86
CIT-211ENST00000541841 USP17L10C9JJH3 530 aa9.69□□□□□ -0.86
CIT-211ENST00000541841 USP17L13C9JLJ4 530 aa9.69□□□□□ -0.86
CIT-211ENST00000541841 USP17L12C9JPN9 530 aa9.69□□□□□ -0.86
CIT-211ENST00000541841 USP17L11C9JVI0 530 aa9.69□□□□□ -0.86
CIT-211ENST00000541841 USP17L21D6R901 530 aa9.69□□□□□ -0.86
CIT-211ENST00000541841 USP17L18D6R9N7 530 aa9.69□□□□□ -0.86
CIT-211ENST00000541841 USP17L22D6RA61 530 aa9.69□□□□□ -0.86
CIT-211ENST00000541841 USP17L17D6RBQ6 530 aa9.69□□□□□ -0.86
CIT-211ENST00000541841 USP17L19D6RCP7 530 aa9.69□□□□□ -0.86
CIT-211ENST00000541841 USP17L20D6RJB6 530 aa9.69□□□□□ -0.86
CIT-211ENST00000541841 EPXP11678 715 aa9.69□□□□□ -0.86
CIT-211ENST00000541841 HOXB4P17483 251 aaPredicted RBP9.69□□□□□ -0.86
CIT-211ENST00000541841 USP17L24Q0WX57 530 aa9.69□□□□□ -0.86
CIT-211ENST00000541841 SAMD5Q5TGI4 173 aa9.69□□□□□ -0.86
CIT-211ENST00000541841 ATAD2Q6PL18 1390 aa9.69□□□□□ -0.86
CIT-211ENST00000541841 NEUROD4Q9HD90 331 aa9.69□□□□□ -0.86
CIT-211ENST00000541841 RFX1P22670 979 aa9.68□□□□□ -0.86
CIT-211ENST00000541841 CFAP70Q5T0N1 1121 aa9.68□□□□□ -0.86
CIT-211ENST00000541841 FAM182BQ5T319 152 aa9.68□□□□□ -0.86
CIT-211ENST00000541841 DCAF5Q96JK2 942 aa9.68□□□□□ -0.86
CIT-211ENST00000541841 BTBD6Q96KE9 485 aa9.68□□□□□ -0.86
CIT-211ENST00000541841 VRTNQ9H8Y1 702 aa9.68□□□□□ -0.86
CIT-211ENST00000541841 PRR12Q9ULL5 1215 aa9.68□□□□□ -0.86
CIT-211ENST00000541841 CHMP3Q9Y3E7 222 aa9.68□□□□□ -0.86
CIT-211ENST00000541841 POTEAQ6S8J7 498 aa9.67□□□□□ -0.86
CIT-211ENST00000541841 RAB44Q7Z6P3 723 aaPredicted RBP9.67□□□□□ -0.86
CIT-211ENST00000541841 SUV39H2Q9H5I1 410 aa9.67□□□□□ -0.86
CIT-211ENST00000541841 SUPT5HO00267 1087 aaKnown RBP9.66□□□□□ -0.86
CIT-211ENST00000541841 ADH6P28332 368 aa9.66□□□□□ -0.86
CIT-211ENST00000541841 HIRAP54198 1017 aaPredicted RBP9.66□□□□□ -0.86
CIT-211ENST00000541841 ZNF468Q5VIY5 522 aaPredicted RBP9.66□□□□□ -0.86
CIT-211ENST00000541841 ANKMY2Q8IV38 441 aa9.66□□□□□ -0.86
CIT-211ENST00000541841 ALDH16A1Q8IZ83 802 aa9.66□□□□□ -0.86
CIT-211ENST00000541841 SLC30A3Q99726 388 aa9.66□□□□□ -0.86
CIT-211ENST00000541841 C2orf49Q9BVC5 232 aaPredicted RBP9.66□□□□□ -0.86
CIT-211ENST00000541841 ITGB2P05107 769 aa9.65□□□□□ -0.86
CIT-211ENST00000541841 COL8A1P27658 744 aa9.65□□□□□ -0.86
CIT-211ENST00000541841 CHSY3Q70JA7 882 aa9.65□□□□□ -0.86
CIT-211ENST00000541841 SUSD3Q96L08 255 aa9.65□□□□□ -0.86
CIT-211ENST00000541841 CEP63Q96MT8 703 aa9.65□□□□□ -0.86
CIT-211ENST00000541841 MKL2Q9ULH7 1088 aa9.65□□□□□ -0.86
CIT-211ENST00000541841 FAM196BA6NMK8 535 aa9.64□□□□□ -0.87
CIT-211ENST00000541841 PLA2G4EQ3MJ16 856 aa9.64□□□□□ -0.87
CIT-211ENST00000541841 C1orf53Q5VUE5 145 aa9.64□□□□□ -0.87
CIT-211ENST00000541841 LINC00114Q6XXX2 140 aa9.64□□□□□ -0.87
CIT-211ENST00000541841 SYT9Q86SS6 491 aa9.64□□□□□ -0.87
CIT-211ENST00000541841 BRD7Q9NPI1 651 aa9.63□□□□□ -0.87
CIT-211ENST00000541841 TYRO3Q06418 890 aa9.62□□□□□ -0.87
CIT-211ENST00000541841 LAMC2Q13753 1193 aa9.62□□□□□ -0.87
CIT-211ENST00000541841 DGKGP49619 791 aa9.61□□□□□ -0.87
CIT-211ENST00000541841 GPC6Q9Y625 555 aaPredicted RBP9.61□□□□□ -0.87
CIT-211ENST00000541841 KRBA1A5PL33 1030 aa9.6□□□□□ -0.87
CIT-211ENST00000541841 SPEM2Q0P670 501 aa9.6□□□□□ -0.87
CIT-211ENST00000541841 AVENQ9NQS1 362 aaPredicted RBP9.6□□□□□ -0.87
CIT-211ENST00000541841 STAG2Q8N3U4 1231 aa9.59□□□□□ -0.87
CIT-211ENST00000541841 ANKIB1Q9P2G1 1089 aa9.59□□□□□ -0.87
CIT-211ENST00000541841 IGFBP4P22692 258 aa9.58□□□□□ -0.88
CIT-211ENST00000541841 BTLAQ7Z6A9 289 aa9.58□□□□□ -0.88
CIT-211ENST00000541841 KLK14Q9P0G3 267 aa9.58□□□□□ -0.88
CIT-211ENST00000541841 BCS1LQ9Y276 419 aa9.58□□□□□ -0.88
CIT-211ENST00000541841 KCNH4Q9UQ05 1017 aa9.57□□□□□ -0.88
CIT-211ENST00000541841 ELOA3CA0A087WX78 387 aaPredicted RBP9.56□□□□□ -0.88
CIT-211ENST00000541841 ELOA3DA6NLF2 546 aaPredicted RBP9.56□□□□□ -0.88
CIT-211ENST00000541841 GNB5O14775 395 aa9.56□□□□□ -0.88
CIT-211ENST00000541841 ELOA3BQ3SY89 546 aa9.56□□□□□ -0.88
CIT-211ENST00000541841 ELOA3Q8NG57 546 aa9.56□□□□□ -0.88
CIT-211ENST00000541841 FAM200AQ8TCP9 573 aa9.56□□□□□ -0.88
CIT-211ENST00000541841 BHMTQ93088 406 aa9.56□□□□□ -0.88
CIT-211ENST00000541841 MDFIQ99750 246 aa9.56□□□□□ -0.88
CIT-211ENST00000541841 SPOCK3Q9BQ16 436 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms