RNA–Protein interactions for RNA: ENST00000541236.5

ARF3-207, Transcript of ADP ribosylation factor 3, humanhuman

TSL 2

Gene ARF3, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF3-207ENST00000541236 PRAMEF22A3QJZ6 481 aa16.61■□□□□ 0.25
ARF3-207ENST00000541236 CNGB1Q14028 1251 aaPredicted RBP16.61■□□□□ 0.25
ARF3-207ENST00000541236 PRPF40BQ6NWY9 871 aaKnown RBP16.61■□□□□ 0.25
ARF3-207ENST00000541236 DZIP3Q86Y13 1208 aaKnown RBP16.61■□□□□ 0.25
ARF3-207ENST00000541236 CNKSR1Q969H4 720 aa16.61■□□□□ 0.25
ARF3-207ENST00000541236 PIP4K2AP48426 406 aaPredicted RBP16.6■□□□□ 0.25
ARF3-207ENST00000541236 C7orf43Q8WVR3 580 aa16.6■□□□□ 0.25
ARF3-207ENST00000541236 DDNO94850 711 aaPredicted RBP16.59■□□□□ 0.25
ARF3-207ENST00000541236 POTEIP0CG38 1075 aa16.59■□□□□ 0.25
ARF3-207ENST00000541236 POTEJP0CG39 1038 aa16.59■□□□□ 0.25
ARF3-207ENST00000541236 HSPA1AP0DMV8 641 aaKnown RBP16.59■□□□□ 0.25
ARF3-207ENST00000541236 HSPA1BP0DMV9 641 aaKnown RBP16.59■□□□□ 0.25
ARF3-207ENST00000541236 ST5P78524 1137 aa16.59■□□□□ 0.25
ARF3-207ENST00000541236 CLEC4GQ6UXB4 293 aa16.59■□□□□ 0.25
ARF3-207ENST00000541236 MASTLQ96GX5 879 aa16.59■□□□□ 0.25
ARF3-207ENST00000541236 KLRG2A4D1S0 409 aaPredicted RBP16.58■□□□□ 0.24
ARF3-207ENST00000541236 NPM2Q86SE8 214 aaKnown RBP16.58■□□□□ 0.24
ARF3-207ENST00000541236 CACNA1SQ13698 1873 aa16.58■□□□□ 0.24
ARF3-207ENST00000541236 NBPF26B4DH59 902 aa16.57■□□□□ 0.24
ARF3-207ENST00000541236 SOGA3Q5TF21 947 aa16.57■□□□□ 0.24
ARF3-207ENST00000541236 CHADLQ6NUI6 762 aa16.57■□□□□ 0.24
ARF3-207ENST00000541236 NBPF10Q6P3W6 841 aaKnown RBP16.57■□□□□ 0.24
ARF3-207ENST00000541236 TNS4Q8IZW8 715 aa16.57■□□□□ 0.24
ARF3-207ENST00000541236 NBPF15Q8N660 670 aa16.57■□□□□ 0.24
ARF3-207ENST00000541236 RGL2O15211 777 aa16.56■□□□□ 0.24
ARF3-207ENST00000541236 SNRPA1P09661 255 aaKnown RBP16.56■□□□□ 0.24
ARF3-207ENST00000541236 MCM10Q7L590 875 aa16.56■□□□□ 0.24
ARF3-207ENST00000541236 NBPF5PQ86XG9 351 aaPredicted RBP16.56■□□□□ 0.24
ARF3-207ENST00000541236 CFAP53Q96M91 514 aa16.56■□□□□ 0.24
ARF3-207ENST00000541236 NPHP1O15259 732 aa16.55■□□□□ 0.24
ARF3-207ENST00000541236 L3MBTL3Q96JM7 780 aaPredicted RBP16.55■□□□□ 0.24
ARF3-207ENST00000541236 CREBZFQ9NS37 354 aa16.55■□□□□ 0.24
ARF3-207ENST00000541236 NPR1P16066 1061 aa16.54■□□□□ 0.24
ARF3-207ENST00000541236 PPP2R1AP30153 589 aa16.54■□□□□ 0.24
ARF3-207ENST00000541236 DCTN1Q14203 1278 aa16.54■□□□□ 0.24
ARF3-207ENST00000541236 CCDC93Q567U6 631 aa16.54■□□□□ 0.24
ARF3-207ENST00000541236 ZNF652Q9Y2D9 606 aa16.54■□□□□ 0.24
ARF3-207ENST00000541236 SNED1Q8TER0 1413 aa16.53■□□□□ 0.24
ARF3-207ENST00000541236 PASKQ96RG2 1323 aa16.53■□□□□ 0.24
ARF3-207ENST00000541236 U2AF1L5P0DN76 240 aaPredicted RBP16.53■□□□□ 0.24
ARF3-207ENST00000541236 U2AF1Q01081 240 aaKnown RBP eCLIP16.53■□□□□ 0.24
ARF3-207ENST00000541236 NUDCQ9Y266 331 aa16.53■□□□□ 0.24
ARF3-207ENST00000541236 HTATSF1O43719 755 aaKnown RBP16.52■□□□□ 0.24
ARF3-207ENST00000541236 CAPN15O75808 1086 aa16.52■□□□□ 0.24
ARF3-207ENST00000541236 FKBP4Q02790 459 aaKnown RBP eCLIP16.52■□□□□ 0.24
ARF3-207ENST00000541236 OLFM4Q6UX06 510 aa16.52■□□□□ 0.24
ARF3-207ENST00000541236 TPTE2Q6XPS3 522 aa16.52■□□□□ 0.24
ARF3-207ENST00000541236 RTF1Q92541 710 aaKnown RBP16.52■□□□□ 0.24
ARF3-207ENST00000541236 TAF1DQ9H5J8 278 aaPredicted RBP16.52■□□□□ 0.24
ARF3-207ENST00000541236 NIP7Q9Y221 180 aaKnown RBP eCLIP16.52■□□□□ 0.24
ARF3-207ENST00000541236 SCN4AP35499 1836 aa16.52■□□□□ 0.23
ARF3-207ENST00000541236 ADAMTSL1Q8N6G6 1762 aa16.51■□□□□ 0.23
ARF3-207ENST00000541236 ZNF541Q9H0D2 1346 aa16.51■□□□□ 0.23
ARF3-207ENST00000541236 IQCA1LA6NCM1 817 aa16.51■□□□□ 0.23
ARF3-207ENST00000541236 HLFQ16534 295 aa16.51■□□□□ 0.23
ARF3-207ENST00000541236 LDHDQ86WU2 507 aa16.51■□□□□ 0.23
ARF3-207ENST00000541236 MKRN1Q9UHC7 482 aaKnown RBP16.51■□□□□ 0.23
ARF3-207ENST00000541236 LAMB4A4D0S4 1761 aa16.51■□□□□ 0.23
ARF3-207ENST00000541236 ITGBL1O95965 494 aaPredicted RBP16.5■□□□□ 0.23
ARF3-207ENST00000541236 ZNF277Q9NRM2 450 aaPredicted RBP16.5■□□□□ 0.23
ARF3-207ENST00000541236 CNTNAP1P78357 1384 aa16.5■□□□□ 0.23
ARF3-207ENST00000541236 TAF7Q15545 349 aaPredicted RBP16.49■□□□□ 0.23
ARF3-207ENST00000541236 ABCC12Q96J65 1359 aa16.49■□□□□ 0.23
ARF3-207ENST00000541236 FAM177BA6PVY3 158 aa16.48■□□□□ 0.23
ARF3-207ENST00000541236 CRY2Q49AN0 593 aa16.48■□□□□ 0.23
ARF3-207ENST00000541236 RTKN2Q8IZC4 609 aa16.48■□□□□ 0.23
ARF3-207ENST00000541236 MIS18AQ9NYP9 233 aa16.48■□□□□ 0.23
ARF3-207ENST00000541236 KDM3BQ7LBC6 1761 aa16.48■□□□□ 0.23
ARF3-207ENST00000541236 FZD9O00144 591 aa16.47■□□□□ 0.23
ARF3-207ENST00000541236 COL4A5P29400 1685 aa16.46■□□□□ 0.23
ARF3-207ENST00000541236 ALDH1B1P30837 517 aa16.46■□□□□ 0.23
ARF3-207ENST00000541236 IARSP41252 1262 aaKnown RBP16.46■□□□□ 0.23
ARF3-207ENST00000541236 HACL1Q9UJ83 578 aa16.46■□□□□ 0.23
ARF3-207ENST00000541236 RIC1Q4ADV7 1423 aa16.45■□□□□ 0.22
ARF3-207ENST00000541236 ERVV-1B6SEH8 477 aa16.45■□□□□ 0.22
ARF3-207ENST00000541236 FOXN1O15353 648 aa16.45■□□□□ 0.22
ARF3-207ENST00000541236 EPHX2P34913 555 aa16.45■□□□□ 0.22
ARF3-207ENST00000541236 SYNE4Q8N205 404 aa16.45■□□□□ 0.22
ARF3-207ENST00000541236 PSMD1Q99460 953 aa16.45■□□□□ 0.22
ARF3-207ENST00000541236 RNF123Q5XPI4 1314 aa16.45■□□□□ 0.22
ARF3-207ENST00000541236 IBTKQ9P2D0 1353 aaPredicted RBP16.44■□□□□ 0.22
ARF3-207ENST00000541236 TMEM88BA6NKF7 163 aa16.44■□□□□ 0.22
ARF3-207ENST00000541236 EAPPQ56P03 285 aaPredicted RBP16.44■□□□□ 0.22
ARF3-207ENST00000541236 NUTM1Q86Y26 1132 aa16.44■□□□□ 0.22
ARF3-207ENST00000541236 MAP3K15Q6ZN16 1313 aa16.44■□□□□ 0.22
ARF3-207ENST00000541236 UBN2Q6ZU65 1347 aa16.44■□□□□ 0.22
ARF3-207ENST00000541236 HOXA10P31260 410 aaPredicted RBP16.43■□□□□ 0.22
ARF3-207ENST00000541236 VEGFBP49765 207 aa16.43■□□□□ 0.22
ARF3-207ENST00000541236 EIF4A1P60842 406 aaKnown RBP16.43■□□□□ 0.22
ARF3-207ENST00000541236 TTLL7Q6ZT98 887 aa16.43■□□□□ 0.22
ARF3-207ENST00000541236 GPC2Q8N158 579 aa16.43■□□□□ 0.22
ARF3-207ENST00000541236 PLEKHF1Q96S99 279 aa16.43■□□□□ 0.22
ARF3-207ENST00000541236 DLG5Q8TDM6 1919 aa16.43■□□□□ 0.22
ARF3-207ENST00000541236 NUP98P52948 1817 aa16.42■□□□□ 0.22
ARF3-207ENST00000541236 LTBP1Q14766 1721 aa16.42■□□□□ 0.22
ARF3-207ENST00000541236 GTF2E1P29083 439 aaPredicted RBP16.42■□□□□ 0.22
ARF3-207ENST00000541236 SLC51AQ86UW1 340 aa16.42■□□□□ 0.22
ARF3-207ENST00000541236 PNMA8AQ86V59 439 aaPredicted RBP16.42■□□□□ 0.22
ARF3-207ENST00000541236 PNISRQ8TF01 805 aaKnown RBP16.42■□□□□ 0.22
ARF3-207ENST00000541236 NYXQ9GZU5 481 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms