RNA–Protein interactions for RNA: ENST00000540990.5

CACNB3-203, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2 BASIC

Gene CACNB3, Length 1,814 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-203ENST00000540990 LIMCH1Q9UPQ0 1083 aa20.27■□□□□ 0.84
CACNB3-203ENST00000540990 MAP4K4O95819 1239 aaPredicted RBP20.27■□□□□ 0.84
CACNB3-203ENST00000540990 ANXA1P04083 346 aa20.27■□□□□ 0.84
CACNB3-203ENST00000540990 ABCC6O95255 1503 aa20.26■□□□□ 0.83
CACNB3-203ENST00000540990 SYCE3A1L190 88 aa20.26■□□□□ 0.83
CACNB3-203ENST00000540990 RUFY3Q7L099 469 aa20.26■□□□□ 0.83
CACNB3-203ENST00000540990 ANKRD24Q8TF21 1146 aa20.26■□□□□ 0.83
CACNB3-203ENST00000540990 GPATCH3Q96I76 525 aa20.26■□□□□ 0.83
CACNB3-203ENST00000540990 NAP1L5Q96NT1 182 aaPredicted RBP20.26■□□□□ 0.83
CACNB3-203ENST00000540990 NOL7Q9UMY1 257 aaKnown RBP20.26■□□□□ 0.83
CACNB3-203ENST00000540990 PLEKHG2Q9H7P9 1386 aa20.26■□□□□ 0.83
CACNB3-203ENST00000540990 MRC1P22897 1456 aa20.25■□□□□ 0.83
CACNB3-203ENST00000540990 AK2P54819 239 aa20.25■□□□□ 0.83
CACNB3-203ENST00000540990 PROSER3Q2NL68 480 aa20.25■□□□□ 0.83
CACNB3-203ENST00000540990 EVI5LQ96CN4 794 aa20.25■□□□□ 0.83
CACNB3-203ENST00000540990 DDX21Q9NR30 783 aaKnown RBP eCLIP20.25■□□□□ 0.83
CACNB3-203ENST00000540990 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.25■□□□□ 0.83
CACNB3-203ENST00000540990 FOXD4L5Q5VV16 416 aaPredicted RBP20.25■□□□□ 0.83
CACNB3-203ENST00000540990 NOL8Q76FK4 1167 aaKnown RBP20.25■□□□□ 0.83
CACNB3-203ENST00000540990 FOXD4L4Q8WXT5 416 aaPredicted RBP20.25■□□□□ 0.83
CACNB3-203ENST00000540990 C9orf78Q9NZ63 289 aaPredicted RBP20.25■□□□□ 0.83
CACNB3-203ENST00000540990 NPHP4O75161 1426 aaPredicted RBP20.24■□□□□ 0.83
CACNB3-203ENST00000540990 KIF1AQ12756 1690 aa20.24■□□□□ 0.83
CACNB3-203ENST00000540990 VPS53Q5VIR6 699 aa20.24■□□□□ 0.83
CACNB3-203ENST00000540990 CWC27Q6UX04 472 aaKnown RBP20.24■□□□□ 0.83
CACNB3-203ENST00000540990 KAZALD1Q96I82 304 aa20.24■□□□□ 0.83
CACNB3-203ENST00000540990 ZSWIM6Q9HCJ5 1215 aa20.24■□□□□ 0.83
CACNB3-203ENST00000540990 DIAPH3Q9NSV4 1193 aa20.24■□□□□ 0.83
CACNB3-203ENST00000540990 GRM8O00222 908 aa20.23■□□□□ 0.83
CACNB3-203ENST00000540990 ZNF500O60304 480 aaPredicted RBP20.23■□□□□ 0.83
CACNB3-203ENST00000540990 PHF14O94880 888 aa20.23■□□□□ 0.83
CACNB3-203ENST00000540990 ZSCAN22P10073 491 aaPredicted RBP20.23■□□□□ 0.83
CACNB3-203ENST00000540990 MCM5P33992 734 aa20.23■□□□□ 0.83
CACNB3-203ENST00000540990 OS9Q13438 667 aaPredicted RBP20.23■□□□□ 0.83
CACNB3-203ENST00000540990 HIP1O00291 1037 aa20.23■□□□□ 0.83
CACNB3-203ENST00000540990 DDX58O95786 925 aaKnown RBP20.23■□□□□ 0.83
CACNB3-203ENST00000540990 PDIA6Q15084 440 aa20.23■□□□□ 0.83
CACNB3-203ENST00000540990 USP48Q86UV5 1035 aa20.23■□□□□ 0.83
CACNB3-203ENST00000540990 ZSCAN31Q96LW9 406 aaPredicted RBP20.23■□□□□ 0.83
CACNB3-203ENST00000540990 OFD1O75665 1012 aa20.22■□□□□ 0.83
CACNB3-203ENST00000540990 NECTIN1Q15223 517 aa20.22■□□□□ 0.83
CACNB3-203ENST00000540990 TSPY26PQ9H489 355 aa20.22■□□□□ 0.83
CACNB3-203ENST00000540990 SH2B1Q9NRF2 756 aaPredicted RBP20.22■□□□□ 0.83
CACNB3-203ENST00000540990 IFIT2P09913 472 aaKnown RBP20.21■□□□□ 0.83
CACNB3-203ENST00000540990 TERF1P54274 439 aa20.21■□□□□ 0.83
CACNB3-203ENST00000540990 SUCLG2Q96I99 432 aa20.21■□□□□ 0.83
CACNB3-203ENST00000540990 SPG7Q9UQ90 795 aa20.21■□□□□ 0.83
CACNB3-203ENST00000540990 MSNP26038 577 aaKnown RBP20.2■□□□□ 0.82
CACNB3-203ENST00000540990 PTH1RQ03431 593 aa20.2■□□□□ 0.82
CACNB3-203ENST00000540990 ORAI2Q96SN7 254 aa20.2■□□□□ 0.82
CACNB3-203ENST00000540990 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.2■□□□□ 0.82
CACNB3-203ENST00000540990 CCDC171Q6TFL3 1326 aa20.2■□□□□ 0.82
CACNB3-203ENST00000540990 SETD1BQ9UPS6 1966 aaKnown RBP20.2■□□□□ 0.82
CACNB3-203ENST00000540990 ADAMTSL3P82987 1691 aa20.2■□□□□ 0.82
CACNB3-203ENST00000540990 STX6O43752 255 aa20.2■□□□□ 0.82
CACNB3-203ENST00000540990 SASH1O94885 1247 aa20.2■□□□□ 0.82
CACNB3-203ENST00000540990 SYT1P21579 422 aa20.2■□□□□ 0.82
CACNB3-203ENST00000540990 CWF19L2Q2TBE0 894 aaKnown RBP20.2■□□□□ 0.82
CACNB3-203ENST00000540990 JCADQ9P266 1359 aa20.19■□□□□ 0.82
CACNB3-203ENST00000540990 GADD45BO75293 160 aaPredicted RBP20.19■□□□□ 0.82
CACNB3-203ENST00000540990 TPM2P07951 284 aa20.19■□□□□ 0.82
CACNB3-203ENST00000540990 PDIA4P13667 645 aaKnown RBP20.19■□□□□ 0.82
CACNB3-203ENST00000540990 UVSSAQ2YD98 709 aa20.19■□□□□ 0.82
CACNB3-203ENST00000540990 RBM33Q96EV2 1170 aaKnown RBP20.19■□□□□ 0.82
CACNB3-203ENST00000540990 PA2G4Q9UQ80 394 aaKnown RBP20.19■□□□□ 0.82
CACNB3-203ENST00000540990 AXIN2Q9Y2T1 843 aa20.19■□□□□ 0.82
CACNB3-203ENST00000540990 ATP6V1DQ9Y5K8 247 aa20.19■□□□□ 0.82
CACNB3-203ENST00000540990 ERBB3P21860 1342 aa20.19■□□□□ 0.82
CACNB3-203ENST00000540990 ALS2Q96Q42 1657 aa20.19■□□□□ 0.82
CACNB3-203ENST00000540990 COL15A1P39059 1388 aa20.19■□□□□ 0.82
CACNB3-203ENST00000540990 SCN11AQ9UI33 1791 aa20.18■□□□□ 0.82
CACNB3-203ENST00000540990 PRAMEF22A3QJZ6 481 aa20.18■□□□□ 0.82
CACNB3-203ENST00000540990 F13A1P00488 732 aa20.18■□□□□ 0.82
CACNB3-203ENST00000540990 CASTP20810 708 aaKnown RBP20.18■□□□□ 0.82
CACNB3-203ENST00000540990 AACSQ86V21 672 aa20.18■□□□□ 0.82
CACNB3-203ENST00000540990 FAM184AQ8NB25 1140 aa20.18■□□□□ 0.82
CACNB3-203ENST00000540990 MAP4K1Q92918 833 aa20.18■□□□□ 0.82
CACNB3-203ENST00000540990 SMC3Q9UQE7 1217 aa20.18■□□□□ 0.82
CACNB3-203ENST00000540990 ZBTB7CA1YPR0 619 aa20.18■□□□□ 0.82
CACNB3-203ENST00000540990 LETM1O95202 739 aaPredicted RBP20.18■□□□□ 0.82
CACNB3-203ENST00000540990 ALDH8A1Q9H2A2 487 aaPredicted RBP20.18■□□□□ 0.82
CACNB3-203ENST00000540990 PDRG1Q9NUG6 133 aa20.18■□□□□ 0.82
CACNB3-203ENST00000540990 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.18■□□□□ 0.82
CACNB3-203ENST00000540990 CCDC39Q9UFE4 941 aa20.18■□□□□ 0.82
CACNB3-203ENST00000540990 ZKSCAN5Q9Y2L8 839 aa20.18■□□□□ 0.82
CACNB3-203ENST00000540990 CYP46A1Q9Y6A2 500 aa20.18■□□□□ 0.82
CACNB3-203ENST00000540990 IGKV5-2P06315 115 aa20.17■□□□□ 0.82
CACNB3-203ENST00000540990 UBE2HP62256 183 aa20.17■□□□□ 0.82
CACNB3-203ENST00000540990 LARP1Q6PKG0 1096 aaKnown RBP20.17■□□□□ 0.82
CACNB3-203ENST00000540990 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.17■□□□□ 0.82
CACNB3-203ENST00000540990 EAF2Q96CJ1 260 aaPredicted RBP20.17■□□□□ 0.82
CACNB3-203ENST00000540990 BICC1Q9H694 974 aaKnown RBP20.17■□□□□ 0.82
CACNB3-203ENST00000540990 KDM6AO15550 1401 aaPredicted RBP20.17■□□□□ 0.82
CACNB3-203ENST00000540990 C1orf167Q5SNV9 1468 aa20.16■□□□□ 0.82
CACNB3-203ENST00000540990 G3BP1Q13283 466 aaKnown RBP eCLIP20.16■□□□□ 0.82
CACNB3-203ENST00000540990 CCDC183Q5T5S1 534 aa20.16■□□□□ 0.82
CACNB3-203ENST00000540990 C5P01031 1676 aa20.16■□□□□ 0.82
CACNB3-203ENST00000540990 LARGE1O95461 756 aa20.16■□□□□ 0.82
CACNB3-203ENST00000540990 ADCK5Q3MIX3 580 aa20.16■□□□□ 0.82
CACNB3-203ENST00000540990 PRPF40BQ6NWY9 871 aaKnown RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms