RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 CEMIPQ8WUJ3 1361 aa15.13■□□□□ 0.01
TMEM258-205ENST00000540434 C21orf2O43822 256 aa15.13■□□□□ 0.01
TMEM258-205ENST00000540434 EAPPQ56P03 285 aaPredicted RBP15.13■□□□□ 0.01
TMEM258-205ENST00000540434 THUMPD2Q9BTF0 503 aaKnown RBP15.13■□□□□ 0.01
TMEM258-205ENST00000540434 RASSF10A6NK89 507 aa15.12■□□□□ 0.01
TMEM258-205ENST00000540434 MAP2K1Q02750 393 aaPredicted RBP15.12■□□□□ 0.01
TMEM258-205ENST00000540434 NFIXQ14938 502 aa15.12■□□□□ 0.01
TMEM258-205ENST00000540434 LDHDQ86WU2 507 aa15.12■□□□□ 0.01
TMEM258-205ENST00000540434 TAF1DQ9H5J8 278 aaPredicted RBP15.12■□□□□ 0.01
TMEM258-205ENST00000540434 RRP7AQ9Y3A4 280 aaKnown RBP15.12■□□□□ 0.01
TMEM258-205ENST00000540434 ANKRD31Q8N7Z5 1873 aa15.12■□□□□ 0.01
TMEM258-205ENST00000540434 GRM1Q13255 1194 aa15.11■□□□□ 0.01
TMEM258-205ENST00000540434 NFE2L2Q16236 605 aa15.11■□□□□ 0.01
TMEM258-205ENST00000540434 MCOLN1Q9GZU1 580 aa15.11■□□□□ 0.01
TMEM258-205ENST00000540434 CLEC11AQ9Y240 323 aa15.11■□□□□ 0.01
TMEM258-205ENST00000540434 SERPINB2P05120 415 aa15.1■□□□□ 0.01
TMEM258-205ENST00000540434 FMR1Q06787 632 aaKnown RBP eCLIP15.1■□□□□ 0.01
TMEM258-205ENST00000540434 CCDC24Q8N4L8 307 aa15.1■□□□□ 0.01
TMEM258-205ENST00000540434 BCL2L12Q9HB09 334 aa15.1■□□□□ 0.01
TMEM258-205ENST00000540434 MIS18AQ9NYP9 233 aa15.1■□□□□ 0.01
TMEM258-205ENST00000540434 ABT1Q9ULW3 272 aaKnown RBP15.1■□□□□ 0.01
TMEM258-205ENST00000540434 SOS1Q07889 1333 aaPredicted RBP15.1■□□□□ 0.01
TMEM258-205ENST00000540434 ANP32CO43423 234 aa15.09■□□□□ 0.01
TMEM258-205ENST00000540434 ZPR1O75312 459 aa15.09■□□□□ 0.01
TMEM258-205ENST00000540434 TMPOP42166 694 aaKnown RBP15.09■□□□□ 0.01
TMEM258-205ENST00000540434 MAP1SQ66K74 1059 aaPredicted RBP15.09■□□□□ 0.01
TMEM258-205ENST00000540434 DNAJC10Q8IXB1 793 aa15.09■□□□□ 0.01
TMEM258-205ENST00000540434 PNISRQ8TF01 805 aaKnown RBP15.09■□□□□ 0.01
TMEM258-205ENST00000540434 ZNF622Q969S3 477 aaKnown RBP eCLIP15.09■□□□□ 0.01
TMEM258-205ENST00000540434 PDE4DIPQ5VU43 2346 aa15.09■□□□□ 0.01
TMEM258-205ENST00000540434 UBR2Q8IWV8 1755 aa15.08■□□□□ 0.01
TMEM258-205ENST00000540434 H0YIN7 160 aa15.08■□□□□ 0
TMEM258-205ENST00000540434 PAXIP1Q6ZW49 1069 aaPredicted RBP15.08■□□□□ 0
TMEM258-205ENST00000540434 ZNF496Q96IT1 587 aaPredicted RBP15.08■□□□□ 0
TMEM258-205ENST00000540434 NARFQ9UHQ1 456 aa15.08■□□□□ 0
TMEM258-205ENST00000540434 PRAMEF22A3QJZ6 481 aa15.07■□□□□ 0
TMEM258-205ENST00000540434 RIPK4P57078 832 aa15.07■□□□□ 0
TMEM258-205ENST00000540434 TEFQ10587 303 aa15.07■□□□□ 0
TMEM258-205ENST00000540434 WDR43Q15061 677 aaKnown RBP eCLIP15.07■□□□□ 0
TMEM258-205ENST00000540434 NEUROD2Q15784 382 aa15.07■□□□□ 0
TMEM258-205ENST00000540434 CYP4F22Q6NT55 531 aa15.07■□□□□ 0
TMEM258-205ENST00000540434 TRIM35Q9UPQ4 493 aa15.07■□□□□ 0
TMEM258-205ENST00000540434 SCN4AP35499 1836 aa15.07■□□□□ 0
TMEM258-205ENST00000540434 HTATSF1O43719 755 aaKnown RBP15.06■□□□□ 0
TMEM258-205ENST00000540434 CYP19A1P11511 503 aaPredicted RBP15.06■□□□□ 0
TMEM258-205ENST00000540434 ZNF790Q6PG37 636 aa15.06■□□□□ 0
TMEM258-205ENST00000540434 BICDL1Q6ZP65 573 aa15.06■□□□□ 0
TMEM258-205ENST00000540434 CNTROBQ8N137 903 aa15.06■□□□□ 0
TMEM258-205ENST00000540434 RUNDC1Q96C34 613 aa15.06■□□□□ 0
TMEM258-205ENST00000540434 MAPK8IP3Q9UPT6 1336 aa15.06■□□□□ 0
TMEM258-205ENST00000540434 COL11A2P13942 1736 aaPredicted RBP15.06■□□□□ 0
TMEM258-205ENST00000540434 SLX4Q8IY92 1834 aa15.06■□□□□ 0
TMEM258-205ENST00000540434 IQCA1LA6NCM1 817 aa15.05■□□□□ -0
TMEM258-205ENST00000540434 BTBD11A6QL63 1104 aa15.05■□□□□ -0
TMEM258-205ENST00000540434 AOC2O75106 756 aa15.05■□□□□ -0
TMEM258-205ENST00000540434 RTF1Q92541 710 aaKnown RBP15.05■□□□□ -0
TMEM258-205ENST00000540434 CAPNS2Q96L46 248 aa15.05■□□□□ -0
TMEM258-205ENST00000540434 TAOK3Q9H2K8 898 aa15.05■□□□□ -0
TMEM258-205ENST00000540434 MRS2Q9HD23 443 aa15.05■□□□□ -0
TMEM258-205ENST00000540434 ZNF541Q9H0D2 1346 aa15.05■□□□□ -0
TMEM258-205ENST00000540434 CACNA1SQ13698 1873 aa15.05■□□□□ -0
TMEM258-205ENST00000540434 CASP8AP2Q9UKL3 1982 aa15.04■□□□□ -0
TMEM258-205ENST00000540434 ADAMTSL1Q8N6G6 1762 aa15.04■□□□□ -0
TMEM258-205ENST00000540434 APAF1O14727 1248 aa15.04■□□□□ -0
TMEM258-205ENST00000540434 L3MBTL3Q96JM7 780 aaPredicted RBP15.04■□□□□ -0
TMEM258-205ENST00000540434 LTBP1Q14766 1721 aa15.03■□□□□ -0
TMEM258-205ENST00000540434 COL15A1P39059 1388 aa15.03■□□□□ -0
TMEM258-205ENST00000540434 LTBP3Q9NS15 1303 aa15.03■□□□□ -0
TMEM258-205ENST00000540434 SOX10P56693 466 aa15.03■□□□□ -0
TMEM258-205ENST00000540434 DGKZQ13574 1117 aa15.03■□□□□ -0
TMEM258-205ENST00000540434 TAF7Q15545 349 aaPredicted RBP15.03■□□□□ -0
TMEM258-205ENST00000540434 GPR101Q96P66 508 aaPredicted RBP15.03■□□□□ -0
TMEM258-205ENST00000540434 BEGAINQ9BUH8 593 aa15.03■□□□□ -0
TMEM258-205ENST00000540434 PNNQ9H307 717 aaKnown RBP15.03■□□□□ -0
TMEM258-205ENST00000540434 THSD7BQ9C0I4 1608 aa15.03■□□□□ -0
TMEM258-205ENST00000540434 EPHX2P34913 555 aa15.02■□□□□ -0
TMEM258-205ENST00000540434 HACL1Q9UJ83 578 aa15.02■□□□□ -0
TMEM258-205ENST00000540434 ZBTB1Q9Y2K1 713 aa15.02■□□□□ -0
TMEM258-205ENST00000540434 HEG1Q9ULI3 1381 aa15.01□□□□□ -0.01
TMEM258-205ENST00000540434 RNF123Q5XPI4 1314 aa15.01□□□□□ -0.01
TMEM258-205ENST00000540434 NEFMP07197 916 aa15.01□□□□□ -0.01
TMEM258-205ENST00000540434 DDX21Q9NR30 783 aaKnown RBP eCLIP15.01□□□□□ -0.01
TMEM258-205ENST00000540434 USP16Q9Y5T5 823 aa15.01□□□□□ -0.01
TMEM258-205ENST00000540434 KDM3BQ7LBC6 1761 aa15.01□□□□□ -0.01
TMEM258-205ENST00000540434 ARFGEF2Q9Y6D5 1785 aa15.01□□□□□ -0.01
TMEM258-205ENST00000540434 TTC5Q8N0Z6 440 aa15□□□□□ -0.01
TMEM258-205ENST00000540434 BRIP1Q9BX63 1249 aa15□□□□□ -0.01
TMEM258-205ENST00000540434 A1BGP04217 495 aa14.99□□□□□ -0.01
TMEM258-205ENST00000540434 PIP4K2AP48426 406 aaPredicted RBP14.99□□□□□ -0.01
TMEM258-205ENST00000540434 VSIG10Q8N0Z9 540 aa14.99□□□□□ -0.01
TMEM258-205ENST00000540434 PDZRN3Q9UPQ7 1066 aa14.99□□□□□ -0.01
TMEM258-205ENST00000540434 EIF4A1P60842 406 aaKnown RBP14.98□□□□□ -0.01
TMEM258-205ENST00000540434 TBC1D9BQ66K14 1250 aa14.98□□□□□ -0.01
TMEM258-205ENST00000540434 FMNL2Q96PY5 1086 aa14.98□□□□□ -0.01
TMEM258-205ENST00000540434 TRAF5O00463 557 aa14.97□□□□□ -0.01
TMEM258-205ENST00000540434 PDE6BP35913 854 aa14.97□□□□□ -0.01
TMEM258-205ENST00000540434 EIF5P55010 431 aaKnown RBP14.97□□□□□ -0.01
TMEM258-205ENST00000540434 KRT24Q2M2I5 525 aa14.97□□□□□ -0.01
TMEM258-205ENST00000540434 CST9Q5W186 159 aa14.97□□□□□ -0.01
TMEM258-205ENST00000540434 PRR5LQ6MZQ0 368 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 162 ms