RNA–Protein interactions for RNA: ENST00000540183.1

SEMA4D-222, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-222ENST00000540183 SMC1BQ8NDV3 1235 aa19.07■□□□□ 0.64
SEMA4D-222ENST00000540183 SETDB2Q96T68 719 aa19.07■□□□□ 0.64
SEMA4D-222ENST00000540183 CNBD1Q8NA66 436 aa19.06■□□□□ 0.64
SEMA4D-222ENST00000540183 KDM3BQ7LBC6 1761 aa19.06■□□□□ 0.64
SEMA4D-222ENST00000540183 NUP98P52948 1817 aa19.05■□□□□ 0.64
SEMA4D-222ENST00000540183 VEGFAP15692 232 aaPredicted RBP19.05■□□□□ 0.64
SEMA4D-222ENST00000540183 NBPF26B4DH59 902 aa19.04■□□□□ 0.64
SEMA4D-222ENST00000540183 NPHP1O15259 732 aa19.04■□□□□ 0.64
SEMA4D-222ENST00000540183 NBPF10Q6P3W6 841 aaKnown RBP19.04■□□□□ 0.64
SEMA4D-222ENST00000540183 NPM2Q86SE8 214 aaKnown RBP19.04■□□□□ 0.64
SEMA4D-222ENST00000540183 NBPF15Q8N660 670 aa19.04■□□□□ 0.64
SEMA4D-222ENST00000540183 NUDCQ9Y266 331 aa19.04■□□□□ 0.64
SEMA4D-222ENST00000540183 SRGNP10124 158 aa19.03■□□□□ 0.64
SEMA4D-222ENST00000540183 ST5P78524 1137 aa19.03■□□□□ 0.64
SEMA4D-222ENST00000540183 ERFEQ4G0M1 354 aa19.03■□□□□ 0.64
SEMA4D-222ENST00000540183 JMYQ8N9B5 988 aa19.03■□□□□ 0.64
SEMA4D-222ENST00000540183 RTF1Q92541 710 aaKnown RBP19.03■□□□□ 0.64
SEMA4D-222ENST00000540183 SNRPA1P09661 255 aaKnown RBP19.02■□□□□ 0.64
SEMA4D-222ENST00000540183 PRPF40BQ6NWY9 871 aaKnown RBP19.02■□□□□ 0.64
SEMA4D-222ENST00000540183 MIS18AQ9NYP9 233 aa19.02■□□□□ 0.64
SEMA4D-222ENST00000540183 PDZRN3Q9UPQ7 1066 aa19.02■□□□□ 0.64
SEMA4D-222ENST00000540183 FAM177BA6PVY3 158 aa19.01■□□□□ 0.63
SEMA4D-222ENST00000540183 STYK1Q6J9G0 422 aa19.01■□□□□ 0.63
SEMA4D-222ENST00000540183 OLFM4Q6UX06 510 aa19■□□□□ 0.63
SEMA4D-222ENST00000540183 NBPF5PQ86XG9 351 aaPredicted RBP19■□□□□ 0.63
SEMA4D-222ENST00000540183 CNKSR1Q969H4 720 aa19■□□□□ 0.63
SEMA4D-222ENST00000540183 MASTLQ96GX5 879 aa19■□□□□ 0.63
SEMA4D-222ENST00000540183 TAOK3Q9H2K8 898 aa19■□□□□ 0.63
SEMA4D-222ENST00000540183 DDNO94850 711 aaPredicted RBP18.99■□□□□ 0.63
SEMA4D-222ENST00000540183 POTEIP0CG38 1075 aa18.99■□□□□ 0.63
SEMA4D-222ENST00000540183 POTEJP0CG39 1038 aa18.99■□□□□ 0.63
SEMA4D-222ENST00000540183 LTBP3Q9NS15 1303 aa18.99■□□□□ 0.63
SEMA4D-222ENST00000540183 HLFQ16534 295 aa18.98■□□□□ 0.63
SEMA4D-222ENST00000540183 COL13A1Q5TAT6 717 aaPredicted RBP18.98■□□□□ 0.63
SEMA4D-222ENST00000540183 DPY19L2Q6NUT2 758 aa18.98■□□□□ 0.63
SEMA4D-222ENST00000540183 NIP7Q9Y221 180 aaKnown RBP eCLIP18.98■□□□□ 0.63
SEMA4D-222ENST00000540183 SCN4AP35499 1836 aa18.97■□□□□ 0.63
SEMA4D-222ENST00000540183 CLEC4GQ6UXB4 293 aa18.97■□□□□ 0.63
SEMA4D-222ENST00000540183 C7orf43Q8WVR3 580 aa18.97■□□□□ 0.63
SEMA4D-222ENST00000540183 TAF7Q15545 349 aaPredicted RBP18.96■□□□□ 0.63
SEMA4D-222ENST00000540183 ZNF652Q9Y2D9 606 aa18.96■□□□□ 0.63
SEMA4D-222ENST00000540183 HTATSF1O43719 755 aaKnown RBP18.95■□□□□ 0.62
SEMA4D-222ENST00000540183 NGEFQ8N5V2 710 aa18.95■□□□□ 0.62
SEMA4D-222ENST00000540183 THUMPD2Q9BTF0 503 aaKnown RBP18.95■□□□□ 0.62
SEMA4D-222ENST00000540183 ABCC12Q96J65 1359 aa18.93■□□□□ 0.62
SEMA4D-222ENST00000540183 KLRG2A4D1S0 409 aaPredicted RBP18.93■□□□□ 0.62
SEMA4D-222ENST00000540183 NPR1P16066 1061 aa18.93■□□□□ 0.62
SEMA4D-222ENST00000540183 CCDC93Q567U6 631 aa18.93■□□□□ 0.62
SEMA4D-222ENST00000540183 ZNF277Q9NRM2 450 aaPredicted RBP18.93■□□□□ 0.62
SEMA4D-222ENST00000540183 ZNF541Q9H0D2 1346 aa18.93■□□□□ 0.62
SEMA4D-222ENST00000540183 SOGA3Q5TF21 947 aa18.92■□□□□ 0.62
SEMA4D-222ENST00000540183 TPTE2Q6XPS3 522 aa18.92■□□□□ 0.62
SEMA4D-222ENST00000540183 PLEKHF1Q96S99 279 aa18.92■□□□□ 0.62
SEMA4D-222ENST00000540183 CHADLQ6NUI6 762 aa18.91■□□□□ 0.62
SEMA4D-222ENST00000540183 TTLL7Q6ZT98 887 aa18.91■□□□□ 0.62
SEMA4D-222ENST00000540183 SLC51AQ86UW1 340 aa18.91■□□□□ 0.62
SEMA4D-222ENST00000540183 NUTM1Q86Y26 1132 aa18.91■□□□□ 0.62
SEMA4D-222ENST00000540183 HSPA1AP0DMV8 641 aaKnown RBP18.9■□□□□ 0.62
SEMA4D-222ENST00000540183 HSPA1BP0DMV9 641 aaKnown RBP18.9■□□□□ 0.62
SEMA4D-222ENST00000540183 FKBP4Q02790 459 aaKnown RBP eCLIP18.9■□□□□ 0.62
SEMA4D-222ENST00000540183 RRP7AQ9Y3A4 280 aaKnown RBP18.9■□□□□ 0.62
SEMA4D-222ENST00000540183 ADAMTSL1Q8N6G6 1762 aa18.9■□□□□ 0.62
SEMA4D-222ENST00000540183 COL4A5P29400 1685 aa18.89■□□□□ 0.61
SEMA4D-222ENST00000540183 MYL6BP14649 208 aa18.89■□□□□ 0.61
SEMA4D-222ENST00000540183 EIF4A1P60842 406 aaKnown RBP18.89■□□□□ 0.61
SEMA4D-222ENST00000540183 NFE2L2Q16236 605 aa18.88■□□□□ 0.61
SEMA4D-222ENST00000540183 MKRN1Q9UHC7 482 aaKnown RBP18.88■□□□□ 0.61
SEMA4D-222ENST00000540183 SNED1Q8TER0 1413 aa18.88■□□□□ 0.61
SEMA4D-222ENST00000540183 LAMB2P55268 1798 aa18.88■□□□□ 0.61
SEMA4D-222ENST00000540183 RGL2O15211 777 aa18.87■□□□□ 0.61
SEMA4D-222ENST00000540183 CAPN15O75808 1086 aa18.87■□□□□ 0.61
SEMA4D-222ENST00000540183 GPTP24298 496 aa18.87■□□□□ 0.61
SEMA4D-222ENST00000540183 GTF2E1P29083 439 aaPredicted RBP18.87■□□□□ 0.61
SEMA4D-222ENST00000540183 MAP3K15Q6ZN16 1313 aa18.87■□□□□ 0.61
SEMA4D-222ENST00000540183 UBN2Q6ZU65 1347 aa18.87■□□□□ 0.61
SEMA4D-222ENST00000540183 SYNE4Q8N205 404 aa18.87■□□□□ 0.61
SEMA4D-222ENST00000540183 L3MBTL3Q96JM7 780 aaPredicted RBP18.87■□□□□ 0.61
SEMA4D-222ENST00000540183 ZBTB3Q9H5J0 574 aa18.87■□□□□ 0.61
SEMA4D-222ENST00000540183 TAF1DQ9H5J8 278 aaPredicted RBP18.87■□□□□ 0.61
SEMA4D-222ENST00000540183 ANKRD36CQ5JPF3 1778 aa18.86■□□□□ 0.61
SEMA4D-222ENST00000540183 LTBP1Q14766 1721 aa18.86■□□□□ 0.61
SEMA4D-222ENST00000540183 NEFMP07197 916 aa18.85■□□□□ 0.61
SEMA4D-222ENST00000540183 IARSP41252 1262 aaKnown RBP18.85■□□□□ 0.61
SEMA4D-222ENST00000540183 EAPPQ56P03 285 aaPredicted RBP18.85■□□□□ 0.61
SEMA4D-222ENST00000540183 RTKN2Q8IZC4 609 aa18.85■□□□□ 0.61
SEMA4D-222ENST00000540183 PNISRQ8TF01 805 aaKnown RBP18.85■□□□□ 0.61
SEMA4D-222ENST00000540183 TAF1P21675 1872 aa18.85■□□□□ 0.61
SEMA4D-222ENST00000540183 PASKQ96RG2 1323 aa18.84■□□□□ 0.61
SEMA4D-222ENST00000540183 ERVV-1B6SEH8 477 aa18.84■□□□□ 0.61
SEMA4D-222ENST00000540183 ALDH1B1P30837 517 aa18.84■□□□□ 0.61
SEMA4D-222ENST00000540183 CRY2Q49AN0 593 aa18.84■□□□□ 0.61
SEMA4D-222ENST00000540183 SUSD4Q5VX71 490 aa18.84■□□□□ 0.61
SEMA4D-222ENST00000540183 KIF6Q6ZMV9 814 aa18.84■□□□□ 0.61
SEMA4D-222ENST00000540183 C3orf67Q6ZVT6 689 aa18.84■□□□□ 0.61
SEMA4D-222ENST00000540183 TNS4Q8IZW8 715 aa18.84■□□□□ 0.61
SEMA4D-222ENST00000540183 CREBZFQ9NS37 354 aa18.84■□□□□ 0.61
SEMA4D-222ENST00000540183 RNF123Q5XPI4 1314 aa18.83■□□□□ 0.61
SEMA4D-222ENST00000540183 IQCA1LA6NCM1 817 aa18.83■□□□□ 0.6
SEMA4D-222ENST00000540183 LDHDQ86WU2 507 aa18.83■□□□□ 0.6
SEMA4D-222ENST00000540183 NYXQ9GZU5 481 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms