RNA–Protein interactions for RNA: ENST00000540121.5

PRKAB1-205, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 5 BASIC

Gene PRKAB1, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-205ENST00000540121 KIAA1211Q6ZU35 1233 aa16.41■□□□□ 0.22
PRKAB1-205ENST00000540121 ANKRD24Q8TF21 1146 aa16.41■□□□□ 0.22
PRKAB1-205ENST00000540121 C19orf44Q9H6X5 657 aa16.41■□□□□ 0.22
PRKAB1-205ENST00000540121 SNRKQ9NRH2 765 aa16.41■□□□□ 0.22
PRKAB1-205ENST00000540121 FOXD4L1Q9NU39 408 aa16.41■□□□□ 0.22
PRKAB1-205ENST00000540121 ZDHHC9Q9Y397 364 aa16.41■□□□□ 0.22
PRKAB1-205ENST00000540121 COL15A1P39059 1388 aa16.41■□□□□ 0.22
PRKAB1-205ENST00000540121 GAS2L3Q86XJ1 694 aa16.4■□□□□ 0.22
PRKAB1-205ENST00000540121 USHBP1Q8N6Y0 703 aa16.4■□□□□ 0.22
PRKAB1-205ENST00000540121 NECTIN2Q92692 538 aa16.4■□□□□ 0.22
PRKAB1-205ENST00000540121 WDR33Q9C0J8 1336 aaKnown RBP16.4■□□□□ 0.22
PRKAB1-205ENST00000540121 TRIM44Q96DX7 344 aaPredicted RBP16.4■□□□□ 0.22
PRKAB1-205ENST00000540121 RTN4Q9NQC3 1192 aaKnown RBP16.4■□□□□ 0.22
PRKAB1-205ENST00000540121 ECHDC1Q9NTX5 307 aa16.4■□□□□ 0.22
PRKAB1-205ENST00000540121 TRPM3Q9HCF6 1732 aaPredicted RBP16.39■□□□□ 0.22
PRKAB1-205ENST00000540121 CADPS2Q86UW7 1296 aa16.39■□□□□ 0.21
PRKAB1-205ENST00000540121 ZGPATQ8N5A5 531 aaKnown RBP16.39■□□□□ 0.21
PRKAB1-205ENST00000540121 SYAP1Q96A49 352 aaPredicted RBP16.39■□□□□ 0.21
PRKAB1-205ENST00000540121 EVI5LQ96CN4 794 aa16.39■□□□□ 0.21
PRKAB1-205ENST00000540121 PANK2Q9BZ23 570 aa16.39■□□□□ 0.21
PRKAB1-205ENST00000540121 C9orf78Q9NZ63 289 aaPredicted RBP16.39■□□□□ 0.21
PRKAB1-205ENST00000540121 NASPP49321 788 aaPredicted RBP16.38■□□□□ 0.21
PRKAB1-205ENST00000540121 LARP1Q6PKG0 1096 aaKnown RBP16.38■□□□□ 0.21
PRKAB1-205ENST00000540121 KRT28Q7Z3Y7 464 aa16.38■□□□□ 0.21
PRKAB1-205ENST00000540121 ZSCAN31Q96LW9 406 aaPredicted RBP16.38■□□□□ 0.21
PRKAB1-205ENST00000540121 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.38■□□□□ 0.21
PRKAB1-205ENST00000540121 ZSCAN23Q3MJ62 389 aa16.37■□□□□ 0.21
PRKAB1-205ENST00000540121 TMEM87AQ8NBN3 555 aa16.37■□□□□ 0.21
PRKAB1-205ENST00000540121 LSG1Q9H089 658 aaKnown RBP16.37■□□□□ 0.21
PRKAB1-205ENST00000540121 SPG7Q9UQ90 795 aa16.37■□□□□ 0.21
PRKAB1-205ENST00000540121 MAP3K2Q9Y2U5 619 aa16.37■□□□□ 0.21
PRKAB1-205ENST00000540121 ERBB3P21860 1342 aa16.37■□□□□ 0.21
PRKAB1-205ENST00000540121 C1orf167Q5SNV9 1468 aa16.37■□□□□ 0.21
PRKAB1-205ENST00000540121 ESPNB1AK53 854 aa16.37■□□□□ 0.21
PRKAB1-205ENST00000540121 GRM8O00222 908 aa16.37■□□□□ 0.21
PRKAB1-205ENST00000540121 MPRIPQ6WCQ1 1025 aa16.37■□□□□ 0.21
PRKAB1-205ENST00000540121 UNC5CLQ8IV45 518 aa16.37■□□□□ 0.21
PRKAB1-205ENST00000540121 TTC14Q96N46 770 aa16.37■□□□□ 0.21
PRKAB1-205ENST00000540121 IL1RAPL2Q9NP60 686 aa16.37■□□□□ 0.21
PRKAB1-205ENST00000540121 LIMCH1Q9UPQ0 1083 aa16.37■□□□□ 0.21
PRKAB1-205ENST00000540121 ATP6V1DQ9Y5K8 247 aa16.37■□□□□ 0.21
PRKAB1-205ENST00000540121 SIPA1L3O60292 1781 aaPredicted RBP16.36■□□□□ 0.21
PRKAB1-205ENST00000540121 PHF14O94880 888 aa16.36■□□□□ 0.21
PRKAB1-205ENST00000540121 ALDH8A1Q9H2A2 487 aaPredicted RBP16.36■□□□□ 0.21
PRKAB1-205ENST00000540121 SH2B1Q9NRF2 756 aaPredicted RBP16.36■□□□□ 0.21
PRKAB1-205ENST00000540121 PALD1Q9ULE6 856 aa16.36■□□□□ 0.21
PRKAB1-205ENST00000540121 PRPF40AO75400 957 aaKnown RBP16.35■□□□□ 0.21
PRKAB1-205ENST00000540121 NUTM1Q86Y26 1132 aa16.35■□□□□ 0.21
PRKAB1-205ENST00000540121 LRRC59Q96AG4 307 aaKnown RBP16.35■□□□□ 0.21
PRKAB1-205ENST00000540121 RRAGDQ9NQL2 400 aaPredicted RBP16.35■□□□□ 0.21
PRKAB1-205ENST00000540121 KCNQ3O43525 872 aa16.34■□□□□ 0.21
PRKAB1-205ENST00000540121 LETM1O95202 739 aaPredicted RBP16.34■□□□□ 0.21
PRKAB1-205ENST00000540121 IFIT2P09913 472 aaKnown RBP16.34■□□□□ 0.21
PRKAB1-205ENST00000540121 NEXNQ0ZGT2 675 aa16.34■□□□□ 0.21
PRKAB1-205ENST00000540121 VPS53Q5VIR6 699 aa16.34■□□□□ 0.21
PRKAB1-205ENST00000540121 LRSAM1Q6UWE0 723 aa16.34■□□□□ 0.21
PRKAB1-205ENST00000540121 RAPGEF4Q8WZA2 1011 aa16.34■□□□□ 0.21
PRKAB1-205ENST00000540121 ORAI2Q96SN7 254 aa16.34■□□□□ 0.21
PRKAB1-205ENST00000540121 SLC52A2Q9HAB3 445 aa16.34■□□□□ 0.21
PRKAB1-205ENST00000540121 SNX14Q9Y5W7 946 aa16.34■□□□□ 0.21
PRKAB1-205ENST00000540121 ATF3P18847 181 aa16.34■□□□□ 0.21
PRKAB1-205ENST00000540121 NCLP19338 710 aaKnown RBP16.34■□□□□ 0.21
PRKAB1-205ENST00000540121 OS9Q13438 667 aaPredicted RBP16.34■□□□□ 0.21
PRKAB1-205ENST00000540121 PKP1Q13835 747 aa16.34■□□□□ 0.21
PRKAB1-205ENST00000540121 CSPP1Q1MSJ5 1256 aa16.34■□□□□ 0.21
PRKAB1-205ENST00000540121 ZNF790Q6PG37 636 aa16.34■□□□□ 0.21
PRKAB1-205ENST00000540121 DIAPH3Q9NSV4 1193 aa16.34■□□□□ 0.21
PRKAB1-205ENST00000540121 TSHZ3Q63HK5 1081 aa16.33■□□□□ 0.2
PRKAB1-205ENST00000540121 CAVIN1Q6NZI2 390 aaKnown RBP16.33■□□□□ 0.2
PRKAB1-205ENST00000540121 PDLIM2Q96JY6 352 aa16.33■□□□□ 0.2
PRKAB1-205ENST00000540121 ERBB4Q15303 1308 aa16.33■□□□□ 0.2
PRKAB1-205ENST00000540121 RFX7Q2KHR2 1363 aa16.33■□□□□ 0.2
PRKAB1-205ENST00000540121 MRC1P22897 1456 aa16.32■□□□□ 0.2
PRKAB1-205ENST00000540121 PXDNQ92626 1479 aa16.32■□□□□ 0.2
PRKAB1-205ENST00000540121 ALS2Q96Q42 1657 aa16.32■□□□□ 0.2
PRKAB1-205ENST00000540121 TATP17735 454 aaPredicted RBP16.32■□□□□ 0.2
PRKAB1-205ENST00000540121 MCM5P33992 734 aa16.32■□□□□ 0.2
PRKAB1-205ENST00000540121 G3BP1Q13283 466 aaKnown RBP eCLIP16.32■□□□□ 0.2
PRKAB1-205ENST00000540121 PDIA6Q15084 440 aa16.32■□□□□ 0.2
PRKAB1-205ENST00000540121 IFNL2Q8IZJ0 200 aa16.32■□□□□ 0.2
PRKAB1-205ENST00000540121 ZSWIM6Q9HCJ5 1215 aa16.32■□□□□ 0.2
PRKAB1-205ENST00000540121 AFF2P51816 1311 aa16.32■□□□□ 0.2
PRKAB1-205ENST00000540121 NPHP3Q7Z494 1330 aa16.32■□□□□ 0.2
PRKAB1-205ENST00000540121 ZKSCAN1P17029 563 aaPredicted RBP16.31■□□□□ 0.2
PRKAB1-205ENST00000540121 PSMA5P28066 241 aa16.31■□□□□ 0.2
PRKAB1-205ENST00000540121 TSGA10IPQ3SY00 556 aa16.31■□□□□ 0.2
PRKAB1-205ENST00000540121 FAM184AQ8NB25 1140 aa16.31■□□□□ 0.2
PRKAB1-205ENST00000540121 GPT2Q8TD30 523 aa16.31■□□□□ 0.2
PRKAB1-205ENST00000540121 DCAF5Q96JK2 942 aa16.31■□□□□ 0.2
PRKAB1-205ENST00000540121 NECTIN1Q15223 517 aa16.3■□□□□ 0.2
PRKAB1-205ENST00000540121 ANKRD1Q15327 319 aa16.3■□□□□ 0.2
PRKAB1-205ENST00000540121 BRINP3Q76B58 766 aa16.3■□□□□ 0.2
PRKAB1-205ENST00000540121 METTL22Q9BUU2 404 aaPredicted RBP16.3■□□□□ 0.2
PRKAB1-205ENST00000540121 AXIN2Q9Y2T1 843 aa16.3■□□□□ 0.2
PRKAB1-205ENST00000540121 SNRPA1P09661 255 aaKnown RBP16.3■□□□□ 0.2
PRKAB1-205ENST00000540121 PHKG2P15735 406 aa16.3■□□□□ 0.2
PRKAB1-205ENST00000540121 ZSCAN30Q86W11 494 aa16.3■□□□□ 0.2
PRKAB1-205ENST00000540121 MAP4K1Q92918 833 aa16.3■□□□□ 0.2
PRKAB1-205ENST00000540121 COPRSQ9NQ92 184 aa16.3■□□□□ 0.2
PRKAB1-205ENST00000540121 CPDO75976 1380 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms