RNA–Protein interactions for RNA: ENST00000539960.1

PRPF19-204, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 796 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-204ENST00000539960 CHPF2Q9P2E5 772 aa17.36■□□□□ 0.37
PRPF19-204ENST00000539960 ZNF652Q9Y2D9 606 aa17.36■□□□□ 0.37
PRPF19-204ENST00000539960 FANCIQ9NVI1 1328 aa17.36■□□□□ 0.37
PRPF19-204ENST00000539960 SERPINB2P05120 415 aa17.35■□□□□ 0.37
PRPF19-204ENST00000539960 HLFQ16534 295 aa17.35■□□□□ 0.37
PRPF19-204ENST00000539960 KIF6Q6ZMV9 814 aa17.35■□□□□ 0.37
PRPF19-204ENST00000539960 NLGN2Q8NFZ4 835 aa17.35■□□□□ 0.37
PRPF19-204ENST00000539960 SETDB2Q96T68 719 aa17.35■□□□□ 0.37
PRPF19-204ENST00000539960 MAP3K15Q6ZN16 1313 aa17.35■□□□□ 0.37
PRPF19-204ENST00000539960 LAMB4A4D0S4 1761 aa17.34■□□□□ 0.37
PRPF19-204ENST00000539960 TWISTNBQ3B726 338 aaPredicted RBP17.34■□□□□ 0.37
PRPF19-204ENST00000539960 CCDC30Q5VVM6 783 aa17.34■□□□□ 0.37
PRPF19-204ENST00000539960 XAGE3Q8WTP9 111 aa17.34■□□□□ 0.37
PRPF19-204ENST00000539960 HYPKQ9NX55 129 aa17.34■□□□□ 0.37
PRPF19-204ENST00000539960 EXOSC9Q06265 439 aaKnown RBP17.33■□□□□ 0.36
PRPF19-204ENST00000539960 AIMP1Q12904 312 aaKnown RBP17.33■□□□□ 0.36
PRPF19-204ENST00000539960 VAMP4O75379 141 aa17.32■□□□□ 0.36
PRPF19-204ENST00000539960 ZBTB3Q9H5J0 574 aa17.32■□□□□ 0.36
PRPF19-204ENST00000539960 E9PSI1 815 aa17.31■□□□□ 0.36
PRPF19-204ENST00000539960 TGFB2P61812 414 aa17.31■□□□□ 0.36
PRPF19-204ENST00000539960 SLFN5Q08AF3 891 aa17.31■□□□□ 0.36
PRPF19-204ENST00000539960 GIGYF2Q6Y7W6 1299 aaKnown RBP17.31■□□□□ 0.36
PRPF19-204ENST00000539960 NIP7Q9Y221 180 aaKnown RBP eCLIP17.31■□□□□ 0.36
PRPF19-204ENST00000539960 DCAF8L1A6NGE4 600 aa17.3■□□□□ 0.36
PRPF19-204ENST00000539960 ANKRD13DQ6ZTN6 518 aa17.3■□□□□ 0.36
PRPF19-204ENST00000539960 CARMIL3Q8ND23 1372 aa17.29■□□□□ 0.36
PRPF19-204ENST00000539960 ZNF34Q8IZ26 560 aa17.29■□□□□ 0.36
PRPF19-204ENST00000539960 PLBD2Q8NHP8 589 aa17.29■□□□□ 0.36
PRPF19-204ENST00000539960 CDCA7LQ96GN5 454 aa17.29■□□□□ 0.36
PRPF19-204ENST00000539960 C10orf71Q711Q0 1435 aa17.29■□□□□ 0.36
PRPF19-204ENST00000539960 A0A0G2JLW4 131 aa17.28■□□□□ 0.36
PRPF19-204ENST00000539960 TCERG1O14776 1098 aaKnown RBP17.28■□□□□ 0.36
PRPF19-204ENST00000539960 TPTE2Q6XPS3 522 aa17.28■□□□□ 0.36
PRPF19-204ENST00000539960 NBPF5PQ86XG9 351 aaPredicted RBP17.28■□□□□ 0.36
PRPF19-204ENST00000539960 STK31Q9BXU1 1019 aa17.28■□□□□ 0.36
PRPF19-204ENST00000539960 PHAXQ9H814 394 aaKnown RBP17.28■□□□□ 0.36
PRPF19-204ENST00000539960 SLC4A2P04920 1241 aa17.27■□□□□ 0.36
PRPF19-204ENST00000539960 TCIRG1Q13488 830 aa17.27■□□□□ 0.36
PRPF19-204ENST00000539960 PRR5LQ6MZQ0 368 aa17.27■□□□□ 0.36
PRPF19-204ENST00000539960 TRMT2AQ8IZ69 625 aaKnown RBP17.27■□□□□ 0.36
PRPF19-204ENST00000539960 CNBD1Q8NA66 436 aa17.27■□□□□ 0.36
PRPF19-204ENST00000539960 SCN7AQ01118 1682 aa17.26■□□□□ 0.35
PRPF19-204ENST00000539960 NPHP1O15259 732 aa17.26■□□□□ 0.35
PRPF19-204ENST00000539960 DPEP1P16444 411 aa17.26■□□□□ 0.35
PRPF19-204ENST00000539960 KCNA3P22001 575 aa17.26■□□□□ 0.35
PRPF19-204ENST00000539960 GPTP24298 496 aa17.26■□□□□ 0.35
PRPF19-204ENST00000539960 HNRNPUQ00839 825 aaKnown RBP eCLIP17.26■□□□□ 0.35
PRPF19-204ENST00000539960 GPR162Q16538 588 aa17.26■□□□□ 0.35
PRPF19-204ENST00000539960 HSP90AB3PQ58FF7 597 aa17.26■□□□□ 0.35
PRPF19-204ENST00000539960 CCDC24Q8N4L8 307 aa17.26■□□□□ 0.35
PRPF19-204ENST00000539960 BRIP1Q9BX63 1249 aa17.26■□□□□ 0.35
PRPF19-204ENST00000539960 ATP10DQ9P241 1426 aa17.25■□□□□ 0.35
PRPF19-204ENST00000539960 FAM177BA6PVY3 158 aa17.25■□□□□ 0.35
PRPF19-204ENST00000539960 ST5P78524 1137 aa17.24■□□□□ 0.35
PRPF19-204ENST00000539960 PARP10Q53GL7 1025 aa17.24■□□□□ 0.35
PRPF19-204ENST00000539960 SUSD4Q5VX71 490 aa17.24■□□□□ 0.35
PRPF19-204ENST00000539960 RIC3Q7Z5B4 369 aa17.24■□□□□ 0.35
PRPF19-204ENST00000539960 NYXQ9GZU5 481 aa17.24■□□□□ 0.35
PRPF19-204ENST00000539960 BCORQ6W2J9 1755 aa17.24■□□□□ 0.35
PRPF19-204ENST00000539960 UBN2Q6ZU65 1347 aa17.23■□□□□ 0.35
PRPF19-204ENST00000539960 DDX58O95786 925 aaKnown RBP17.23■□□□□ 0.35
PRPF19-204ENST00000539960 GTF2E1P29083 439 aaPredicted RBP17.23■□□□□ 0.35
PRPF19-204ENST00000539960 CHRNA5P30532 468 aa17.23■□□□□ 0.35
PRPF19-204ENST00000539960 PDE6BP35913 854 aa17.23■□□□□ 0.35
PRPF19-204ENST00000539960 G2E3Q7L622 706 aa17.23■□□□□ 0.35
PRPF19-204ENST00000539960 PELP1Q8IZL8 1130 aaKnown RBP17.23■□□□□ 0.35
PRPF19-204ENST00000539960 PXDNLA1KZ92 1463 aa17.23■□□□□ 0.35
PRPF19-204ENST00000539960 H0YIN7 160 aa17.22■□□□□ 0.35
PRPF19-204ENST00000539960 PPP1R42Q7Z4L9 355 aa17.22■□□□□ 0.35
PRPF19-204ENST00000539960 PIM2Q9P1W9 311 aa17.22■□□□□ 0.35
PRPF19-204ENST00000539960 PDZRN3Q9UPQ7 1066 aa17.22■□□□□ 0.35
PRPF19-204ENST00000539960 YBX3P16989 372 aaKnown RBP eCLIP17.21■□□□□ 0.359e-9■■■□□ 15.2
PRPF19-204ENST00000539960 TRIM28Q13263 835 aaKnown RBP17.21■□□□□ 0.35
PRPF19-204ENST00000539960 KSR2Q6VAB6 950 aa17.21■□□□□ 0.35
PRPF19-204ENST00000539960 NLRP10Q86W26 655 aa17.21■□□□□ 0.35
PRPF19-204ENST00000539960 C2CD5Q86YS7 1000 aa17.21■□□□□ 0.35
PRPF19-204ENST00000539960 ISCA1Q9BUE6 129 aa17.21■□□□□ 0.35
PRPF19-204ENST00000539960 UTP14AQ9BVJ6 771 aaKnown RBP17.21■□□□□ 0.35
PRPF19-204ENST00000539960 WWC3Q9ULE0 1092 aa17.21■□□□□ 0.35
PRPF19-204ENST00000539960 NRXN2Q9P2S2 1712 aa17.21■□□□□ 0.35
PRPF19-204ENST00000539960 PI4KAP2A4QPH2 592 aa17.2■□□□□ 0.34
PRPF19-204ENST00000539960 ATP5J2-PTCD1G3V325 749 aa17.2■□□□□ 0.34
PRPF19-204ENST00000539960 GRIN3BO60391 1043 aa17.2■□□□□ 0.34
PRPF19-204ENST00000539960 NTSR2O95665 410 aa17.2■□□□□ 0.34
PRPF19-204ENST00000539960 ERFEQ4G0M1 354 aa17.2■□□□□ 0.34
PRPF19-204ENST00000539960 NUTM1Q86Y26 1132 aa17.2■□□□□ 0.34
PRPF19-204ENST00000539960 PI4KAP1Q8N8J0 262 aa17.2■□□□□ 0.34
PRPF19-204ENST00000539960 NUP98P52948 1817 aa17.19■□□□□ 0.34
PRPF19-204ENST00000539960 AFDNP55196 1824 aaKnown RBP17.19■□□□□ 0.34
PRPF19-204ENST00000539960 KIF13BQ9NQT8 1826 aa17.19■□□□□ 0.34
PRPF19-204ENST00000539960 KLRG2A4D1S0 409 aaPredicted RBP17.19■□□□□ 0.34
PRPF19-204ENST00000539960 FLIIQ13045 1269 aa17.19■□□□□ 0.34
PRPF19-204ENST00000539960 ZNF428Q96B54 188 aa17.19■□□□□ 0.34
PRPF19-204ENST00000539960 METTL22Q9BUU2 404 aaPredicted RBP17.19■□□□□ 0.34
PRPF19-204ENST00000539960 BCS1LQ9Y276 419 aa17.19■□□□□ 0.34
PRPF19-204ENST00000539960 MAP3K2Q9Y2U5 619 aa17.19■□□□□ 0.34
PRPF19-204ENST00000539960 IBTKQ9P2D0 1353 aaPredicted RBP17.18■□□□□ 0.34
PRPF19-204ENST00000539960 SRGNP10124 158 aa17.18■□□□□ 0.34
PRPF19-204ENST00000539960 DALRD3Q5D0E6 543 aaKnown RBP17.18■□□□□ 0.34
PRPF19-204ENST00000539960 SLC10A5Q5PT55 438 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms