RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 UBR3Q6ZT12 1888 aa19.66■□□□□ 0.74
DDB1-216ENST00000539739 TTLL7Q6ZT98 887 aa19.65■□□□□ 0.74
DDB1-216ENST00000539739 ANKRD13DQ6ZTN6 518 aa19.65■□□□□ 0.74
DDB1-216ENST00000539739 NOB1Q9ULX3 412 aaKnown RBP19.65■□□□□ 0.74
DDB1-216ENST00000539739 RIC3Q7Z5B4 369 aa19.65■□□□□ 0.74
DDB1-216ENST00000539739 FRAT1Q92837 279 aaPredicted RBP19.65■□□□□ 0.74
DDB1-216ENST00000539739 NARFQ9UHQ1 456 aa19.65■□□□□ 0.74
DDB1-216ENST00000539739 PNPLA7Q6ZV29 1317 aa19.65■□□□□ 0.74
DDB1-216ENST00000539739 ERVV-1B6SEH8 477 aa19.64■□□□□ 0.73
DDB1-216ENST00000539739 COL23A1Q86Y22 540 aaPredicted RBP19.64■□□□□ 0.73
DDB1-216ENST00000539739 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.64■□□□□ 0.73
DDB1-216ENST00000539739 PLBD2Q8NHP8 589 aa19.64■□□□□ 0.73
DDB1-216ENST00000539739 MAP3K15Q6ZN16 1313 aa19.64■□□□□ 0.73
DDB1-216ENST00000539739 KSR2Q6VAB6 950 aa19.63■□□□□ 0.73
DDB1-216ENST00000539739 ARHGAP45Q92619 1136 aa19.63■□□□□ 0.73
DDB1-216ENST00000539739 ZBTB3Q9H5J0 574 aa19.63■□□□□ 0.73
DDB1-216ENST00000539739 API5Q9BZZ5 524 aaKnown RBP19.62■□□□□ 0.73
DDB1-216ENST00000539739 ZNF652Q9Y2D9 606 aa19.62■□□□□ 0.73
DDB1-216ENST00000539739 PI4KAP2A4QPH2 592 aa19.62■□□□□ 0.73
DDB1-216ENST00000539739 CAMTA2O94983 1202 aa19.62■□□□□ 0.73
DDB1-216ENST00000539739 ZKSCAN2Q63HK3 967 aa19.62■□□□□ 0.73
DDB1-216ENST00000539739 PI4KAP1Q8N8J0 262 aa19.62■□□□□ 0.73
DDB1-216ENST00000539739 USP42Q9H9J4 1324 aaKnown RBP19.62■□□□□ 0.73
DDB1-216ENST00000539739 RGL2O15211 777 aa19.61■□□□□ 0.73
DDB1-216ENST00000539739 R3HDM1Q15032 1099 aaKnown RBP19.61■□□□□ 0.73
DDB1-216ENST00000539739 USPL1Q5W0Q7 1092 aa19.61■□□□□ 0.73
DDB1-216ENST00000539739 CLEC4GQ6UXB4 293 aa19.61■□□□□ 0.73
DDB1-216ENST00000539739 SRP68Q9UHB9 627 aaKnown RBP19.61■□□□□ 0.73
DDB1-216ENST00000539739 ATF7IPQ6VMQ6 1270 aa19.6■□□□□ 0.73
DDB1-216ENST00000539739 GIGYF2Q6Y7W6 1299 aaKnown RBP19.6■□□□□ 0.73
DDB1-216ENST00000539739 MAP3K2Q9Y2U5 619 aa19.6■□□□□ 0.73
DDB1-216ENST00000539739 HSP90AB3PQ58FF7 597 aa19.59■□□□□ 0.73
DDB1-216ENST00000539739 DNAAF4Q8WXU2 420 aa19.59■□□□□ 0.73
DDB1-216ENST00000539739 QSER1Q2KHR3 1735 aa19.59■□□□□ 0.73
DDB1-216ENST00000539739 TUBGCP6Q96RT7 1819 aa19.59■□□□□ 0.73
DDB1-216ENST00000539739 NEXNQ0ZGT2 675 aa19.58■□□□□ 0.73
DDB1-216ENST00000539739 HLFQ16534 295 aa19.58■□□□□ 0.73
DDB1-216ENST00000539739 ADCY9O60503 1353 aa19.58■□□□□ 0.72
DDB1-216ENST00000539739 F6X3S4 739 aa19.58■□□□□ 0.72
DDB1-216ENST00000539739 MS4A1P11836 297 aa19.58■□□□□ 0.72
DDB1-216ENST00000539739 SLC16A10Q8TF71 515 aa19.58■□□□□ 0.72
DDB1-216ENST00000539739 METTL22Q9BUU2 404 aaPredicted RBP19.58■□□□□ 0.72
DDB1-216ENST00000539739 GYS1P13807 737 aa19.57■□□□□ 0.72
DDB1-216ENST00000539739 SLC4A10Q6U841 1118 aa19.57■□□□□ 0.72
DDB1-216ENST00000539739 C4AP0C0L4 1744 aa19.56■□□□□ 0.72
DDB1-216ENST00000539739 PSDA5PKW4 1024 aaPredicted RBP19.56■□□□□ 0.72
DDB1-216ENST00000539739 TRIM27P14373 513 aa19.56■□□□□ 0.72
DDB1-216ENST00000539739 TCIRG1Q13488 830 aa19.56■□□□□ 0.72
DDB1-216ENST00000539739 FTSJ3Q8IY81 847 aaKnown RBP19.56■□□□□ 0.72
DDB1-216ENST00000539739 NLGN1Q8N2Q7 840 aa19.56■□□□□ 0.72
DDB1-216ENST00000539739 BCL2L12Q9HB09 334 aa19.56■□□□□ 0.72
DDB1-216ENST00000539739 PLIN1O60240 522 aa19.55■□□□□ 0.72
DDB1-216ENST00000539739 RRP1P56182 461 aaKnown RBP19.55■□□□□ 0.72
DDB1-216ENST00000539739 MYD88Q99836 296 aa19.55■□□□□ 0.72
DDB1-216ENST00000539739 SUPT16HQ9Y5B9 1047 aaKnown RBP19.55■□□□□ 0.72
DDB1-216ENST00000539739 FKBP8Q14318 412 aa19.54■□□□□ 0.72
DDB1-216ENST00000539739 DZIP1LQ8IYY4 767 aaKnown RBP19.54■□□□□ 0.72
DDB1-216ENST00000539739 CLUAP1Q96AJ1 413 aa19.54■□□□□ 0.72
DDB1-216ENST00000539739 PDGFDQ9GZP0 370 aaPredicted RBP19.54■□□□□ 0.72
DDB1-216ENST00000539739 NIP7Q9Y221 180 aaKnown RBP eCLIP19.54■□□□□ 0.72
DDB1-216ENST00000539739 SCN7AQ01118 1682 aa19.53■□□□□ 0.72
DDB1-216ENST00000539739 LINS1Q8NG48 757 aa19.53■□□□□ 0.72
DDB1-216ENST00000539739 SETDB2Q96T68 719 aa19.53■□□□□ 0.72
DDB1-216ENST00000539739 BCORQ6W2J9 1755 aa19.53■□□□□ 0.72
DDB1-216ENST00000539739 ATP10DQ9P241 1426 aa19.52■□□□□ 0.72
DDB1-216ENST00000539739 ATP5J2-PTCD1G3V325 749 aa19.52■□□□□ 0.72
DDB1-216ENST00000539739 GPTP24298 496 aa19.52■□□□□ 0.72
DDB1-216ENST00000539739 CCT4P50991 539 aaKnown RBP19.52■□□□□ 0.72
DDB1-216ENST00000539739 TBC1D9BQ66K14 1250 aa19.52■□□□□ 0.72
DDB1-216ENST00000539739 BICDL1Q6ZP65 573 aa19.52■□□□□ 0.72
DDB1-216ENST00000539739 ZNF34Q8IZ26 560 aa19.52■□□□□ 0.72
DDB1-216ENST00000539739 SRCIN1Q9C0H9 1055 aa19.52■□□□□ 0.72
DDB1-216ENST00000539739 ABCC4O15439 1325 aa19.52■□□□□ 0.71
DDB1-216ENST00000539739 TRIM28Q13263 835 aaKnown RBP19.51■□□□□ 0.71
DDB1-216ENST00000539739 PARP10Q53GL7 1025 aa19.51■□□□□ 0.71
DDB1-216ENST00000539739 BEND3Q5T5X7 828 aa19.51■□□□□ 0.71
DDB1-216ENST00000539739 ISCA1Q9BUE6 129 aa19.51■□□□□ 0.71
DDB1-216ENST00000539739 ARFGEF2Q9Y6D5 1785 aa19.51■□□□□ 0.71
DDB1-216ENST00000539739 NUP98P52948 1817 aa19.51■□□□□ 0.71
DDB1-216ENST00000539739 PXDNLA1KZ92 1463 aa19.51■□□□□ 0.71
DDB1-216ENST00000539739 PDE3AQ14432 1141 aa19.51■□□□□ 0.71
DDB1-216ENST00000539739 MSL1Q68DK7 614 aa19.51■□□□□ 0.71
DDB1-216ENST00000539739 CCDC191Q8NCU4 936 aa19.51■□□□□ 0.71
DDB1-216ENST00000539739 MTFR1LQ9H019 292 aa19.51■□□□□ 0.71
DDB1-216ENST00000539739 TNNQ9UQP3 1299 aa19.51■□□□□ 0.71
DDB1-216ENST00000539739 RNF123Q5XPI4 1314 aa19.5■□□□□ 0.71
DDB1-216ENST00000539739 ALDH1L1O75891 902 aa19.5■□□□□ 0.71
DDB1-216ENST00000539739 IGKV5-2P06315 115 aa19.5■□□□□ 0.71
DDB1-216ENST00000539739 NFIXQ14938 502 aa19.5■□□□□ 0.71
DDB1-216ENST00000539739 NEURL1BA8MQ27 555 aa19.49■□□□□ 0.71
DDB1-216ENST00000539739 ZBTB7AO95365 584 aa19.49■□□□□ 0.71
DDB1-216ENST00000539739 TM4SF1P30408 202 aa19.49■□□□□ 0.71
DDB1-216ENST00000539739 CWF19L2Q2TBE0 894 aaKnown RBP19.49■□□□□ 0.71
DDB1-216ENST00000539739 INTS3Q68E01 1043 aaKnown RBP19.49■□□□□ 0.71
DDB1-216ENST00000539739 PPP1R42Q7Z4L9 355 aa19.49■□□□□ 0.71
DDB1-216ENST00000539739 NLRP10Q86W26 655 aa19.49■□□□□ 0.71
DDB1-216ENST00000539739 CWC25Q9NXE8 425 aaPredicted RBP19.49■□□□□ 0.71
DDB1-216ENST00000539739 PANK1Q8TE04 598 aa19.48■□□□□ 0.71
DDB1-216ENST00000539739 CARMIL3Q8ND23 1372 aa19.48■□□□□ 0.71
DDB1-216ENST00000539739 RLBP1P12271 317 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms