RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 UBXN4Q92575 508 aa7.51□□□□□ -1.21
LSAMP-207ENST00000539563 DDX19AQ9NUU7 478 aaKnown RBP7.51□□□□□ -1.21
LSAMP-207ENST00000539563 TTC21AQ8NDW8 1320 aa7.51□□□□□ -1.21
LSAMP-207ENST00000539563 USP8P40818 1118 aa7.51□□□□□ -1.21
LSAMP-207ENST00000539563 CALML4Q96GE6 196 aa7.51□□□□□ -1.21
LSAMP-207ENST00000539563 CENPHQ9H3R5 247 aa7.51□□□□□ -1.21
LSAMP-207ENST00000539563 THUMPD2Q9BTF0 503 aaKnown RBP7.51□□□□□ -1.21
LSAMP-207ENST00000539563 CCDC8Q9H0W5 538 aaPredicted RBP7.51□□□□□ -1.21
LSAMP-207ENST00000539563 ESPNB1AK53 854 aa7.51□□□□□ -1.21
LSAMP-207ENST00000539563 FLIIQ13045 1269 aa7.51□□□□□ -1.21
LSAMP-207ENST00000539563 CCDC96Q2M329 555 aa7.51□□□□□ -1.21
LSAMP-207ENST00000539563 GSDMDP57764 484 aa7.51□□□□□ -1.21
LSAMP-207ENST00000539563 STXBP4Q6ZWJ1 553 aa7.51□□□□□ -1.21
LSAMP-207ENST00000539563 LRRC27Q9C0I9 530 aa7.51□□□□□ -1.21
LSAMP-207ENST00000539563 CRACR2AQ9BSW2 395 aa7.51□□□□□ -1.21
LSAMP-207ENST00000539563 C14orf93Q9H972 538 aaKnown RBP7.51□□□□□ -1.21
LSAMP-207ENST00000539563 GOLGA8AA7E2F4 631 aa7.51□□□□□ -1.21
LSAMP-207ENST00000539563 GOLGA8BA8MQT2 603 aa7.51□□□□□ -1.21
LSAMP-207ENST00000539563 SSR1P43307 286 aaKnown RBP7.51□□□□□ -1.21
LSAMP-207ENST00000539563 PDE4BQ07343 736 aa7.51□□□□□ -1.21
LSAMP-207ENST00000539563 PPP4R3BQ5MIZ7 849 aa7.5□□□□□ -1.21
LSAMP-207ENST00000539563 TAX1BP1Q86VP1 789 aa7.5□□□□□ -1.21
LSAMP-207ENST00000539563 IDI1Q13907 227 aa7.5□□□□□ -1.21
LSAMP-207ENST00000539563 ZSCAN30Q86W11 494 aa7.5□□□□□ -1.21
LSAMP-207ENST00000539563 FAM114A1Q8IWE2 563 aa7.5□□□□□ -1.21
LSAMP-207ENST00000539563 ZSCAN16Q9H4T2 348 aaPredicted RBP7.5□□□□□ -1.21
LSAMP-207ENST00000539563 ECHDC1Q9NTX5 307 aa7.5□□□□□ -1.21
LSAMP-207ENST00000539563 ADGRF5Q8IZF2 1346 aa7.5□□□□□ -1.21
LSAMP-207ENST00000539563 CETN1Q12798 172 aa7.5□□□□□ -1.21
LSAMP-207ENST00000539563 CCDC178Q5BJE1 867 aa7.5□□□□□ -1.21
LSAMP-207ENST00000539563 UGGT2Q9NYU1 1516 aa7.5□□□□□ -1.21
LSAMP-207ENST00000539563 TEX14Q8IWB6 1497 aa7.5□□□□□ -1.21
LSAMP-207ENST00000539563 UQCRFS1P1P0C7P4 283 aa7.5□□□□□ -1.21
LSAMP-207ENST00000539563 CAMK4Q16566 473 aa7.5□□□□□ -1.21
LSAMP-207ENST00000539563 USHBP1Q8N6Y0 703 aa7.5□□□□□ -1.21
LSAMP-207ENST00000539563 TCP11L1Q9NUJ3 509 aa7.5□□□□□ -1.21
LSAMP-207ENST00000539563 GSTO1P78417 241 aa7.5□□□□□ -1.21
LSAMP-207ENST00000539563 RBM10P98175 930 aaKnown RBP7.5□□□□□ -1.21
LSAMP-207ENST00000539563 BMP2KLQ5H9B9 411 aa7.5□□□□□ -1.21
LSAMP-207ENST00000539563 NUP160Q12769 1436 aa7.5□□□□□ -1.21
LSAMP-207ENST00000539563 CCDC194A0A1B0GVG4 234 aa7.5□□□□□ -1.21
LSAMP-207ENST00000539563 CAVIN2O95810 425 aa7.5□□□□□ -1.21
LSAMP-207ENST00000539563 SNRPA1P09661 255 aaKnown RBP7.5□□□□□ -1.21
LSAMP-207ENST00000539563 TRIM27P14373 513 aa7.5□□□□□ -1.21
LSAMP-207ENST00000539563 PAFAH1B1P43034 410 aa7.5□□□□□ -1.21
LSAMP-207ENST00000539563 TMEM67Q5HYA8 995 aa7.5□□□□□ -1.21
LSAMP-207ENST00000539563 DDX46Q7L014 1031 aaKnown RBP7.5□□□□□ -1.21
LSAMP-207ENST00000539563 ZGPATQ8N5A5 531 aaKnown RBP7.5□□□□□ -1.21
LSAMP-207ENST00000539563 BRPF3Q9ULD4 1205 aa7.5□□□□□ -1.21
LSAMP-207ENST00000539563 GOLGA6L9A6NEM1 432 aa7.49□□□□□ -1.21
LSAMP-207ENST00000539563 STX1AQ16623 288 aa7.49□□□□□ -1.21
LSAMP-207ENST00000539563 TMCO3Q6UWJ1 677 aa7.49□□□□□ -1.21
LSAMP-207ENST00000539563 F6X3S4 739 aa7.49□□□□□ -1.21
LSAMP-207ENST00000539563 TRAF1Q13077 416 aa7.49□□□□□ -1.21
LSAMP-207ENST00000539563 CADPS2Q86UW7 1296 aa7.49□□□□□ -1.21
LSAMP-207ENST00000539563 ZFYP08048 801 aaPredicted RBP7.49□□□□□ -1.21
LSAMP-207ENST00000539563 ANAPC15P60006 121 aa7.49□□□□□ -1.21
LSAMP-207ENST00000539563 KLHL10Q6JEL2 608 aa7.49□□□□□ -1.21
LSAMP-207ENST00000539563 LDHAL6AQ6ZMR3 332 aa7.49□□□□□ -1.21
LSAMP-207ENST00000539563 FAM193AP78312 1265 aa7.49□□□□□ -1.21
LSAMP-207ENST00000539563 GUCY1B3Q02153 619 aa7.49□□□□□ -1.21
LSAMP-207ENST00000539563 NCOA7Q8NI08 942 aa7.49□□□□□ -1.21
LSAMP-207ENST00000539563 NEK1Q96PY6 1258 aa7.49□□□□□ -1.21
LSAMP-207ENST00000539563 FOXO3O43524 673 aa7.49□□□□□ -1.21
LSAMP-207ENST00000539563 TMTC2Q8N394 836 aa7.49□□□□□ -1.21
LSAMP-207ENST00000539563 CCDC102AQ96A19 550 aa7.49□□□□□ -1.21
LSAMP-207ENST00000539563 TAOK3Q9H2K8 898 aa7.49□□□□□ -1.21
LSAMP-207ENST00000539563 KAT14Q9H8E8 782 aa7.49□□□□□ -1.21
LSAMP-207ENST00000539563 YEATS4O95619 227 aa7.49□□□□□ -1.21
LSAMP-207ENST00000539563 HLA-DOAP06340 250 aa7.49□□□□□ -1.21
LSAMP-207ENST00000539563 ST5P78524 1137 aa7.49□□□□□ -1.21
LSAMP-207ENST00000539563 MFSD6Q6ZSS7 791 aa7.49□□□□□ -1.21
LSAMP-207ENST00000539563 MPHOSPH6Q99547 160 aaKnown RBP7.49□□□□□ -1.21
LSAMP-207ENST00000539563 NAA15Q9BXJ9 866 aaKnown RBP7.49□□□□□ -1.21
LSAMP-207ENST00000539563 PBRM1Q86U86 1689 aa7.48□□□□□ -1.21
LSAMP-207ENST00000539563 UBE2HP62256 183 aa7.48□□□□□ -1.21
LSAMP-207ENST00000539563 CCDC152Q4G0S7 254 aa7.48□□□□□ -1.21
LSAMP-207ENST00000539563 FSIP1Q8NA03 581 aa7.48□□□□□ -1.21
LSAMP-207ENST00000539563 ARHGAP45Q92619 1136 aa7.48□□□□□ -1.21
LSAMP-207ENST00000539563 INCENPQ9NQS7 918 aa7.48□□□□□ -1.21
LSAMP-207ENST00000539563 URB2Q14146 1524 aaKnown RBP7.48□□□□□ -1.21
LSAMP-207ENST00000539563 IARSP41252 1262 aaKnown RBP7.48□□□□□ -1.21
LSAMP-207ENST00000539563 GCOM1H8Y6P7 765 aaPredicted RBP7.48□□□□□ -1.21
LSAMP-207ENST00000539563 MYZAPP0CAP1 466 aa7.48□□□□□ -1.21
LSAMP-207ENST00000539563 KIF4BQ2VIQ3 1234 aa7.48□□□□□ -1.21
LSAMP-207ENST00000539563 POTEB2H3BUK9 544 aa7.48□□□□□ -1.21
LSAMP-207ENST00000539563 EMILIN1Q9Y6C2 1016 aa7.48□□□□□ -1.21
LSAMP-207ENST00000539563 TNRQ92752 1358 aa7.48□□□□□ -1.21
LSAMP-207ENST00000539563 ADGBQ8N7X0 1667 aa7.48□□□□□ -1.21
LSAMP-207ENST00000539563 GPATCH8Q9UKJ3 1502 aaKnown RBP7.48□□□□□ -1.21
LSAMP-207ENST00000539563 UVSSAQ2YD98 709 aa7.48□□□□□ -1.21
LSAMP-207ENST00000539563 TBC1D9Q6ZT07 1266 aa7.48□□□□□ -1.21
LSAMP-207ENST00000539563 NUP88Q99567 741 aaPredicted RBP7.48□□□□□ -1.21
LSAMP-207ENST00000539563 CRNKL1Q9BZJ0 848 aaKnown RBP7.48□□□□□ -1.21
LSAMP-207ENST00000539563 CLIP2Q9UDT6 1046 aa7.48□□□□□ -1.21
LSAMP-207ENST00000539563 GOLIM4O00461 696 aa7.48□□□□□ -1.21
LSAMP-207ENST00000539563 STX6O43752 255 aa7.48□□□□□ -1.21
LSAMP-207ENST00000539563 GJB2P29033 226 aa7.48□□□□□ -1.21
LSAMP-207ENST00000539563 METAP2P50579 478 aaKnown RBP eCLIP7.48□□□□□ -1.21
LSAMP-207ENST00000539563 MAP2K1Q02750 393 aaPredicted RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms