RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 ZNF468Q5VIY5 522 aaPredicted RBP5.95□□□□□ -1.46
AC055720.1-201ENST00000539552 PPARGC1BQ86YN6 1023 aaKnown RBP5.95□□□□□ -1.46
AC055720.1-201ENST00000539552 ELOA3Q8NG57 546 aa5.95□□□□□ -1.46
AC055720.1-201ENST00000539552 NIFKQ9BYG3 293 aaKnown RBP5.95□□□□□ -1.46
AC055720.1-201ENST00000539552 FHDC1Q9C0D6 1143 aaPredicted RBP5.95□□□□□ -1.46
AC055720.1-201ENST00000539552 ADGRL1O94910 1474 aa5.95□□□□□ -1.46
AC055720.1-201ENST00000539552 TXKP42681 527 aa5.94□□□□□ -1.46
AC055720.1-201ENST00000539552 SIRT1Q96EB6 747 aa5.94□□□□□ -1.46
AC055720.1-201ENST00000539552 GOPCQ9HD26 462 aa5.94□□□□□ -1.46
AC055720.1-201ENST00000539552 H2AFB1P0C5Y9 115 aa5.93□□□□□ -1.46
AC055720.1-201ENST00000539552 H2AFB2P0C5Z0 115 aa5.93□□□□□ -1.46
AC055720.1-201ENST00000539552 TNP2Q05952 138 aa5.93□□□□□ -1.46
AC055720.1-201ENST00000539552 USP4Q13107 963 aa5.93□□□□□ -1.46
AC055720.1-201ENST00000539552 NEUROD1Q13562 356 aa5.93□□□□□ -1.46
AC055720.1-201ENST00000539552 FBXO31Q5XUX0 539 aaPredicted RBP5.93□□□□□ -1.46
AC055720.1-201ENST00000539552 CCDC82Q8N4S0 544 aa5.93□□□□□ -1.46
AC055720.1-201ENST00000539552 CCDC97Q96F63 343 aaPredicted RBP5.93□□□□□ -1.46
AC055720.1-201ENST00000539552 TRIM34Q9BYJ4 488 aa5.93□□□□□ -1.46
AC055720.1-201ENST00000539552 MARK1Q9P0L2 795 aa5.93□□□□□ -1.46
AC055720.1-201ENST00000539552 A0A1W2PNR3 127 aa5.92□□□□□ -1.46
AC055720.1-201ENST00000539552 FAM229AH3BQW9 127 aa5.92□□□□□ -1.46
AC055720.1-201ENST00000539552 M0R082 166 aa5.92□□□□□ -1.46
AC055720.1-201ENST00000539552 HYAL3O43820 417 aaPredicted RBP5.92□□□□□ -1.46
AC055720.1-201ENST00000539552 YBX3P16989 372 aaKnown RBP eCLIP5.92□□□□□ -1.46
AC055720.1-201ENST00000539552 BICDL1Q6ZP65 573 aa5.92□□□□□ -1.46
AC055720.1-201ENST00000539552 ZNF417Q8TAU3 575 aa5.92□□□□□ -1.46
AC055720.1-201ENST00000539552 PUS7Q96PZ0 661 aaKnown RBP5.92□□□□□ -1.46
AC055720.1-201ENST00000539552 ZNF587Q96SQ5 575 aaPredicted RBP5.92□□□□□ -1.46
AC055720.1-201ENST00000539552 KRTAP9-9Q9BYP9 154 aa5.92□□□□□ -1.46
AC055720.1-201ENST00000539552 KRTAP9-4Q9BYQ2 154 aa5.92□□□□□ -1.46
AC055720.1-201ENST00000539552 HRH3Q9Y5N1 445 aa5.92□□□□□ -1.46
AC055720.1-201ENST00000539552 A6NJR5 290 aa5.91□□□□□ -1.46
AC055720.1-201ENST00000539552 NRG1Q02297 640 aaPredicted RBP5.91□□□□□ -1.46
AC055720.1-201ENST00000539552 TRAPPC3LQ5T215 181 aa5.91□□□□□ -1.46
AC055720.1-201ENST00000539552 TMCO4Q5TGY1 634 aa5.91□□□□□ -1.46
AC055720.1-201ENST00000539552 NEUROD4Q9HD90 331 aa5.91□□□□□ -1.46
AC055720.1-201ENST00000539552 DNAAF2Q9NVR5 837 aaKnown RBP5.91□□□□□ -1.46
AC055720.1-201ENST00000539552 KLF15Q9UIH9 416 aa5.91□□□□□ -1.46
AC055720.1-201ENST00000539552 FAM157BP0CG42 384 aa5.9□□□□□ -1.46
AC055720.1-201ENST00000539552 ELNP15502 786 aa5.9□□□□□ -1.46
AC055720.1-201ENST00000539552 LAMC2Q13753 1193 aa5.9□□□□□ -1.46
AC055720.1-201ENST00000539552 GRIK4Q16099 956 aa5.9□□□□□ -1.46
AC055720.1-201ENST00000539552 MCTP1Q6DN14 999 aa5.9□□□□□ -1.46
AC055720.1-201ENST00000539552 SYT9Q86SS6 491 aa5.9□□□□□ -1.46
AC055720.1-201ENST00000539552 TP53INP1Q96A56 240 aa5.9□□□□□ -1.46
AC055720.1-201ENST00000539552 DOLKQ9UPQ8 538 aa5.9□□□□□ -1.46
AC055720.1-201ENST00000539552 MTMR7Q9Y216 660 aa5.9□□□□□ -1.46
AC055720.1-201ENST00000539552 ATP4AP20648 1035 aa5.89□□□□□ -1.47
AC055720.1-201ENST00000539552 ETNK1Q9HBU6 452 aa5.89□□□□□ -1.47
AC055720.1-201ENST00000539552 SERPINA10Q9UK55 444 aa5.89□□□□□ -1.47
AC055720.1-201ENST00000539552 KRTAP4-8A0A0G2JLE6 195 aa5.88□□□□□ -1.47
AC055720.1-201ENST00000539552 RAC1P63000 192 aa5.88□□□□□ -1.47
AC055720.1-201ENST00000539552 TXNRD3Q86VQ6 643 aa5.88□□□□□ -1.47
AC055720.1-201ENST00000539552 WWC1Q8IX03 1113 aa5.88□□□□□ -1.47
AC055720.1-201ENST00000539552 CDCA7Q9BWT1 371 aaPredicted RBP5.88□□□□□ -1.47
AC055720.1-201ENST00000539552 USP21Q9UK80 565 aa5.88□□□□□ -1.47
AC055720.1-201ENST00000539552 SIN3BO75182 1162 aa5.87□□□□□ -1.47
AC055720.1-201ENST00000539552 MFAP1P55081 439 aaKnown RBP5.87□□□□□ -1.47
AC055720.1-201ENST00000539552 SLFNL1Q499Z3 407 aa5.87□□□□□ -1.47
AC055720.1-201ENST00000539552 KRTAP19-1Q8IUB9 90 aa5.87□□□□□ -1.47
AC055720.1-201ENST00000539552 ZDHHC3Q9NYG2 299 aa5.87□□□□□ -1.47
AC055720.1-201ENST00000539552 CABP1Q9NZU7 370 aa5.87□□□□□ -1.47
AC055720.1-201ENST00000539552 CEP126Q9P2H0 1117 aa5.87□□□□□ -1.47
AC055720.1-201ENST00000539552 RSF1Q96T23 1441 aaPredicted RBP5.86□□□□□ -1.47
AC055720.1-201ENST00000539552 RBM25P49756 843 aaKnown RBP5.86□□□□□ -1.47
AC055720.1-201ENST00000539552 GDF10P55107 478 aa5.86□□□□□ -1.47
AC055720.1-201ENST00000539552 OXLD1Q5BKU9 147 aa5.86□□□□□ -1.47
AC055720.1-201ENST00000539552 PROSER2Q86WR7 435 aaPredicted RBP5.86□□□□□ -1.47
AC055720.1-201ENST00000539552 AEBP1Q8IUX7 1158 aa5.86□□□□□ -1.47
AC055720.1-201ENST00000539552 CLUAP1Q96AJ1 413 aa5.86□□□□□ -1.47
AC055720.1-201ENST00000539552 CCDC85AQ96PX6 553 aaPredicted RBP5.86□□□□□ -1.47
AC055720.1-201ENST00000539552 PRDM6Q9NQX0 595 aa5.86□□□□□ -1.47
AC055720.1-201ENST00000539552 PCMTD2Q9NV79 361 aa5.86□□□□□ -1.47
AC055720.1-201ENST00000539552 NDUFB9Q9Y6M9 179 aa5.86□□□□□ -1.47
AC055720.1-201ENST00000539552 CHD1O14646 1710 aa5.85□□□□□ -1.47
AC055720.1-201ENST00000539552 LAMC3Q9Y6N6 1575 aa5.85□□□□□ -1.47
AC055720.1-201ENST00000539552 MRC2Q9UBG0 1479 aa5.85□□□□□ -1.47
AC055720.1-201ENST00000539552 ADARB2-AS1A8MUL3 147 aa5.85□□□□□ -1.47
AC055720.1-201ENST00000539552 LILRB5O75023 590 aa5.85□□□□□ -1.47
AC055720.1-201ENST00000539552 PDE4CQ08493 712 aa5.85□□□□□ -1.47
AC055720.1-201ENST00000539552 ADGRE1Q14246 886 aa5.85□□□□□ -1.47
AC055720.1-201ENST00000539552 SAMD5Q5TGI4 173 aa5.85□□□□□ -1.47
AC055720.1-201ENST00000539552 PRM3Q9NNZ6 103 aa5.85□□□□□ -1.47
AC055720.1-201ENST00000539552 INHAP05111 366 aa5.84□□□□□ -1.47
AC055720.1-201ENST00000539552 IRAK1P51617 712 aa5.84□□□□□ -1.47
AC055720.1-201ENST00000539552 SMTNP53814 917 aa5.84□□□□□ -1.47
AC055720.1-201ENST00000539552 MBTPS1Q14703 1052 aa5.84□□□□□ -1.47
AC055720.1-201ENST00000539552 MICALL1Q8N3F8 863 aa5.84□□□□□ -1.47
AC055720.1-201ENST00000539552 GJD4Q96KN9 370 aaPredicted RBP5.84□□□□□ -1.47
AC055720.1-201ENST00000539552 ZIC5Q96T25 663 aa5.84□□□□□ -1.47
AC055720.1-201ENST00000539552 KDM6BO15054 1643 aa5.84□□□□□ -1.47
AC055720.1-201ENST00000539552 E9PSI1 815 aa5.83□□□□□ -1.48
AC055720.1-201ENST00000539552 ALBP02768 609 aa5.83□□□□□ -1.48
AC055720.1-201ENST00000539552 ADH7P40394 386 aa5.83□□□□□ -1.48
AC055720.1-201ENST00000539552 EIF4G2P78344 907 aaKnown RBP eCLIP5.83□□□□□ -1.48
AC055720.1-201ENST00000539552 FOXD4L4Q8WXT5 416 aaPredicted RBP5.83□□□□□ -1.48
AC055720.1-201ENST00000539552 TNFRSF25Q93038 417 aa5.83□□□□□ -1.48
AC055720.1-201ENST00000539552 ZNF777Q9ULD5 760 aaPredicted RBP5.83□□□□□ -1.48
AC055720.1-201ENST00000539552 RNF112Q9ULX5 631 aa5.83□□□□□ -1.48
AC055720.1-201ENST00000539552 ACIN1Q9UKV3 1341 aaKnown RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms