RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 CWC27Q6UX04 472 aaKnown RBP11.6□□□□□ -0.55
CDH13-204ENST00000539548 LMTK3Q96Q04 1460 aa11.6□□□□□ -0.55
CDH13-204ENST00000539548 MED1Q15648 1581 aaPredicted RBP11.6□□□□□ -0.55
CDH13-204ENST00000539548 SLIT1O75093 1534 aa11.6□□□□□ -0.55
CDH13-204ENST00000539548 ADCY5O95622 1261 aa11.6□□□□□ -0.55
CDH13-204ENST00000539548 PIBF1Q8WXW3 757 aa11.6□□□□□ -0.55
CDH13-204ENST00000539548 SPG7Q9UQ90 795 aa11.6□□□□□ -0.55
CDH13-204ENST00000539548 ARHGAP23Q9P227 1491 aa11.59□□□□□ -0.55
CDH13-204ENST00000539548 EIF2S2P20042 333 aaKnown RBP11.59□□□□□ -0.55
CDH13-204ENST00000539548 CASTP20810 708 aaKnown RBP11.59□□□□□ -0.55
CDH13-204ENST00000539548 FUCA2Q9BTY2 467 aa11.59□□□□□ -0.55
CDH13-204ENST00000539548 ZSWIM6Q9HCJ5 1215 aa11.59□□□□□ -0.55
CDH13-204ENST00000539548 SH2B1Q9NRF2 756 aaPredicted RBP11.59□□□□□ -0.55
CDH13-204ENST00000539548 DIAPH3Q9NSV4 1193 aa11.59□□□□□ -0.55
CDH13-204ENST00000539548 USP25Q9UHP3 1055 aa11.59□□□□□ -0.55
CDH13-204ENST00000539548 PI4KAP2A4QPH2 592 aa11.58□□□□□ -0.56
CDH13-204ENST00000539548 KDM4AO75164 1064 aa11.58□□□□□ -0.56
CDH13-204ENST00000539548 PI4KAP1Q8N8J0 262 aa11.58□□□□□ -0.56
CDH13-204ENST00000539548 LTV1Q96GA3 475 aaPredicted RBP11.58□□□□□ -0.56
CDH13-204ENST00000539548 PDRG1Q9NUG6 133 aa11.58□□□□□ -0.56
CDH13-204ENST00000539548 CHPF2Q9P2E5 772 aa11.58□□□□□ -0.56
CDH13-204ENST00000539548 MTMR6Q9Y217 621 aa11.58□□□□□ -0.56
CDH13-204ENST00000539548 CHD2O14647 1828 aaKnown RBP11.58□□□□□ -0.56
CDH13-204ENST00000539548 PDIA4P13667 645 aaKnown RBP11.58□□□□□ -0.56
CDH13-204ENST00000539548 HCLS1P14317 486 aaPredicted RBP11.58□□□□□ -0.56
CDH13-204ENST00000539548 GJB2P29033 226 aa11.58□□□□□ -0.56
CDH13-204ENST00000539548 PTH1RQ03431 593 aa11.58□□□□□ -0.56
CDH13-204ENST00000539548 NOLC1Q14978 699 aaKnown RBP eCLIP11.58□□□□□ -0.56
CDH13-204ENST00000539548 CLASRPQ8N2M8 674 aaKnown RBP11.58□□□□□ -0.56
CDH13-204ENST00000539548 MYRIPQ8NFW9 859 aa11.58□□□□□ -0.56
CDH13-204ENST00000539548 PRIMPOLQ96LW4 560 aa11.58□□□□□ -0.56
CDH13-204ENST00000539548 LARP6Q9BRS8 491 aaKnown RBP11.58□□□□□ -0.56
CDH13-204ENST00000539548 ECHDC1Q9NTX5 307 aa11.58□□□□□ -0.56
CDH13-204ENST00000539548 CYP46A1Q9Y6A2 500 aa11.58□□□□□ -0.56
CDH13-204ENST00000539548 LARGE1O95461 756 aa11.57□□□□□ -0.56
CDH13-204ENST00000539548 NUTM2GQ5VZR2 741 aa11.57□□□□□ -0.56
CDH13-204ENST00000539548 ABTB2Q8N961 1025 aa11.57□□□□□ -0.56
CDH13-204ENST00000539548 ADCY9O60503 1353 aa11.57□□□□□ -0.56
CDH13-204ENST00000539548 LTN1O94822 1766 aa11.57□□□□□ -0.56
CDH13-204ENST00000539548 FIBPO43427 364 aa11.57□□□□□ -0.56
CDH13-204ENST00000539548 ALDH1L1O75891 902 aa11.57□□□□□ -0.56
CDH13-204ENST00000539548 CPA1P15085 419 aa11.57□□□□□ -0.56
CDH13-204ENST00000539548 OS9Q13438 667 aaPredicted RBP11.57□□□□□ -0.56
CDH13-204ENST00000539548 NECTIN1Q15223 517 aa11.57□□□□□ -0.56
CDH13-204ENST00000539548 ERC1Q8IUD2 1116 aa11.57□□□□□ -0.56
CDH13-204ENST00000539548 CCDC83Q8IWF9 413 aa11.57□□□□□ -0.56
CDH13-204ENST00000539548 JAKMIP1Q96N16 626 aaKnown RBP11.57□□□□□ -0.56
CDH13-204ENST00000539548 LGR6Q9HBX8 967 aa11.57□□□□□ -0.56
CDH13-204ENST00000539548 SPTLC3Q9NUV7 552 aa11.57□□□□□ -0.56
CDH13-204ENST00000539548 HDAC5Q9UQL6 1122 aa11.57□□□□□ -0.56
CDH13-204ENST00000539548 HMGN5P82970 282 aaKnown RBP11.56□□□□□ -0.56
CDH13-204ENST00000539548 DNM1Q05193 864 aaKnown RBP11.56□□□□□ -0.56
CDH13-204ENST00000539548 ADCK5Q3MIX3 580 aa11.56□□□□□ -0.56
CDH13-204ENST00000539548 PRPF40BQ6NWY9 871 aaKnown RBP11.56□□□□□ -0.56
CDH13-204ENST00000539548 USHBP1Q8N6Y0 703 aa11.56□□□□□ -0.56
CDH13-204ENST00000539548 IP6K1Q92551 441 aa11.56□□□□□ -0.56
CDH13-204ENST00000539548 EVI5LQ96CN4 794 aa11.56□□□□□ -0.56
CDH13-204ENST00000539548 GPATCH3Q96I76 525 aa11.56□□□□□ -0.56
CDH13-204ENST00000539548 ZNF830Q96NB3 372 aaPredicted RBP11.56□□□□□ -0.56
CDH13-204ENST00000539548 LMO7Q8WWI1 1683 aa11.56□□□□□ -0.56
CDH13-204ENST00000539548 PLPPR3Q6T4P5 718 aa11.55□□□□□ -0.56
CDH13-204ENST00000539548 TPM3P06753 285 aa11.55□□□□□ -0.56
CDH13-204ENST00000539548 GTF2F1P35269 517 aaKnown RBP eCLIP11.55□□□□□ -0.56
CDH13-204ENST00000539548 DNTTIP2Q5QJE6 756 aaKnown RBP11.55□□□□□ -0.56
CDH13-204ENST00000539548 GIMAP6Q6P9H5 292 aa11.55□□□□□ -0.56
CDH13-204ENST00000539548 PKNOX2Q96KN3 472 aa11.55□□□□□ -0.56
CDH13-204ENST00000539548 TTC12Q9H892 705 aaPredicted RBP11.55□□□□□ -0.56
CDH13-204ENST00000539548 CCDC171Q6TFL3 1326 aa11.55□□□□□ -0.56
CDH13-204ENST00000539548 HIP1O00291 1037 aa11.54□□□□□ -0.56
CDH13-204ENST00000539548 KCNQ3O43525 872 aa11.54□□□□□ -0.56
CDH13-204ENST00000539548 IFIT2P09913 472 aaKnown RBP11.54□□□□□ -0.56
CDH13-204ENST00000539548 ZKSCAN1P17029 563 aaPredicted RBP11.54□□□□□ -0.56
CDH13-204ENST00000539548 ST3GAL1Q11201 340 aa11.54□□□□□ -0.56
CDH13-204ENST00000539548 ME3Q16798 604 aa11.54□□□□□ -0.56
CDH13-204ENST00000539548 MAP4K1Q92918 833 aa11.54□□□□□ -0.56
CDH13-204ENST00000539548 SNRKQ9NRH2 765 aa11.54□□□□□ -0.56
CDH13-204ENST00000539548 DBF4Q9UBU7 674 aaPredicted RBP11.54□□□□□ -0.56
CDH13-204ENST00000539548 AKAP4Q5JQC9 854 aa11.54□□□□□ -0.56
CDH13-204ENST00000539548 NBPF6Q5VWK0 638 aa11.54□□□□□ -0.56
CDH13-204ENST00000539548 MPNDQ8N594 471 aa11.54□□□□□ -0.56
CDH13-204ENST00000539548 NBPF4Q96M43 638 aa11.54□□□□□ -0.56
CDH13-204ENST00000539548 ALDH8A1Q9H2A2 487 aaPredicted RBP11.54□□□□□ -0.56
CDH13-204ENST00000539548 C9orf78Q9NZ63 289 aaPredicted RBP11.54□□□□□ -0.56
CDH13-204ENST00000539548 BTBD11A6QL63 1104 aa11.53□□□□□ -0.56
CDH13-204ENST00000539548 CCDC192P0DO97 292 aa11.53□□□□□ -0.56
CDH13-204ENST00000539548 CEBPAP49715 358 aaPredicted RBP11.53□□□□□ -0.56
CDH13-204ENST00000539548 HSPA2P54652 639 aa11.53□□□□□ -0.56
CDH13-204ENST00000539548 TEFQ10587 303 aa11.53□□□□□ -0.56
CDH13-204ENST00000539548 CREB3L3Q68CJ9 461 aa11.53□□□□□ -0.56
CDH13-204ENST00000539548 KSR2Q6VAB6 950 aa11.53□□□□□ -0.56
CDH13-204ENST00000539548 RBM8AQ9Y5S9 174 aaKnown RBP11.53□□□□□ -0.56
CDH13-204ENST00000539548 ADGRL3Q9HAR2 1447 aa11.53□□□□□ -0.56
CDH13-204ENST00000539548 AP5Z1O43299 807 aa11.52□□□□□ -0.56
CDH13-204ENST00000539548 ANXA1P04083 346 aa11.52□□□□□ -0.56
CDH13-204ENST00000539548 PSMA5P28066 241 aa11.52□□□□□ -0.56
CDH13-204ENST00000539548 TPRNQ4KMQ1 711 aa11.52□□□□□ -0.56
CDH13-204ENST00000539548 LARP1BQ659C4 914 aaKnown RBP11.52□□□□□ -0.56
CDH13-204ENST00000539548 TPCN1Q9ULQ1 816 aa11.52□□□□□ -0.56
CDH13-204ENST00000539548 MAP3K2Q9Y2U5 619 aa11.52□□□□□ -0.56
CDH13-204ENST00000539548 ELP1O95163 1332 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms