RNA–Protein interactions for RNA: ENST00000539492.1

CD4-209, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-209ENST00000539492 NUP98P52948 1817 aa10.88□□□□□ -0.67
CD4-209ENST00000539492 KCNQ3O43525 872 aa10.88□□□□□ -0.67
CD4-209ENST00000539492 ERFEQ4G0M1 354 aa10.88□□□□□ -0.67
CD4-209ENST00000539492 SOGA3Q5TF21 947 aa10.88□□□□□ -0.67
CD4-209ENST00000539492 STYK1Q6J9G0 422 aa10.88□□□□□ -0.67
CD4-209ENST00000539492 DZIP3Q86Y13 1208 aaKnown RBP10.88□□□□□ -0.67
CD4-209ENST00000539492 CCDC24Q8N4L8 307 aa10.88□□□□□ -0.67
CD4-209ENST00000539492 MASTLQ96GX5 879 aa10.88□□□□□ -0.67
CD4-209ENST00000539492 PHACTR3Q96KR7 559 aa10.88□□□□□ -0.67
CD4-209ENST00000539492 ZNF219Q9P2Y4 722 aaPredicted RBP10.88□□□□□ -0.67
CD4-209ENST00000539492 POTECB2RU33 542 aa10.87□□□□□ -0.67
CD4-209ENST00000539492 SRGNP10124 158 aa10.87□□□□□ -0.67
CD4-209ENST00000539492 NUDCQ9Y266 331 aa10.87□□□□□ -0.67
CD4-209ENST00000539492 ZNF652Q9Y2D9 606 aa10.87□□□□□ -0.67
CD4-209ENST00000539492 SNRPA1P09661 255 aaKnown RBP10.86□□□□□ -0.67
CD4-209ENST00000539492 COL13A1Q5TAT6 717 aaPredicted RBP10.86□□□□□ -0.67
CD4-209ENST00000539492 PRPF40BQ6NWY9 871 aaKnown RBP10.86□□□□□ -0.67
CD4-209ENST00000539492 CLEC4GQ6UXB4 293 aa10.86□□□□□ -0.67
CD4-209ENST00000539492 RTF1Q92541 710 aaKnown RBP10.86□□□□□ -0.67
CD4-209ENST00000539492 KDM3BQ7LBC6 1761 aa10.85□□□□□ -0.67
CD4-209ENST00000539492 RGL2O15211 777 aa10.85□□□□□ -0.67
CD4-209ENST00000539492 NBPF5PQ86XG9 351 aaPredicted RBP10.85□□□□□ -0.67
CD4-209ENST00000539492 USP16Q9Y5T5 823 aa10.85□□□□□ -0.67
CD4-209ENST00000539492 PRAMEF22A3QJZ6 481 aa10.84□□□□□ -0.67
CD4-209ENST00000539492 U2AF1L5P0DN76 240 aaPredicted RBP10.84□□□□□ -0.67
CD4-209ENST00000539492 PIP4K2AP48426 406 aaPredicted RBP10.84□□□□□ -0.67
CD4-209ENST00000539492 U2AF1Q01081 240 aaKnown RBP eCLIP10.84□□□□□ -0.67
CD4-209ENST00000539492 CCDC93Q567U6 631 aa10.84□□□□□ -0.67
CD4-209ENST00000539492 CHADLQ6NUI6 762 aa10.84□□□□□ -0.67
CD4-209ENST00000539492 MCM10Q7L590 875 aa10.84□□□□□ -0.67
CD4-209ENST00000539492 IQCA1LA6NCM1 817 aa10.83□□□□□ -0.68
CD4-209ENST00000539492 HTATSF1O43719 755 aaKnown RBP10.83□□□□□ -0.68
CD4-209ENST00000539492 HSPA1AP0DMV8 641 aaKnown RBP10.83□□□□□ -0.68
CD4-209ENST00000539492 HSPA1BP0DMV9 641 aaKnown RBP10.83□□□□□ -0.68
CD4-209ENST00000539492 NPR1P16066 1061 aa10.83□□□□□ -0.68
CD4-209ENST00000539492 TNS4Q8IZW8 715 aa10.83□□□□□ -0.68
CD4-209ENST00000539492 C7orf43Q8WVR3 580 aa10.83□□□□□ -0.68
CD4-209ENST00000539492 L3MBTL3Q96JM7 780 aaPredicted RBP10.83□□□□□ -0.68
CD4-209ENST00000539492 CREBZFQ9NS37 354 aa10.83□□□□□ -0.68
CD4-209ENST00000539492 KLRG2A4D1S0 409 aaPredicted RBP10.82□□□□□ -0.68
CD4-209ENST00000539492 DDNO94850 711 aaPredicted RBP10.82□□□□□ -0.68
CD4-209ENST00000539492 PPP2R1AP30153 589 aa10.82□□□□□ -0.68
CD4-209ENST00000539492 TPTE2Q6XPS3 522 aa10.82□□□□□ -0.68
CD4-209ENST00000539492 NIP7Q9Y221 180 aaKnown RBP eCLIP10.82□□□□□ -0.68
CD4-209ENST00000539492 ADAMTSL1Q8N6G6 1762 aa10.81□□□□□ -0.68
CD4-209ENST00000539492 NBPF26B4DH59 902 aa10.81□□□□□ -0.68
CD4-209ENST00000539492 POTEIP0CG38 1075 aa10.81□□□□□ -0.68
CD4-209ENST00000539492 POTEJP0CG39 1038 aa10.81□□□□□ -0.68
CD4-209ENST00000539492 FKBP4Q02790 459 aaKnown RBP eCLIP10.81□□□□□ -0.68
CD4-209ENST00000539492 DCTN1Q14203 1278 aa10.81□□□□□ -0.68
CD4-209ENST00000539492 NBPF10Q6P3W6 841 aaKnown RBP10.81□□□□□ -0.68
CD4-209ENST00000539492 LDHDQ86WU2 507 aa10.81□□□□□ -0.68
CD4-209ENST00000539492 RTKN2Q8IZC4 609 aa10.81□□□□□ -0.68
CD4-209ENST00000539492 NBPF15Q8N660 670 aa10.81□□□□□ -0.68
CD4-209ENST00000539492 TRPM7Q96QT4 1865 aa10.81□□□□□ -0.68
CD4-209ENST00000539492 TAF7Q15545 349 aaPredicted RBP10.8□□□□□ -0.68
CD4-209ENST00000539492 TAF1DQ9H5J8 278 aaPredicted RBP10.8□□□□□ -0.68
CD4-209ENST00000539492 ZNF277Q9NRM2 450 aaPredicted RBP10.8□□□□□ -0.68
CD4-209ENST00000539492 ALDH1B1P30837 517 aa10.79□□□□□ -0.68
CD4-209ENST00000539492 PASKQ96RG2 1323 aa10.79□□□□□ -0.68
CD4-209ENST00000539492 ZNF541Q9H0D2 1346 aa10.79□□□□□ -0.68
CD4-209ENST00000539492 CNTNAP1P78357 1384 aa10.78□□□□□ -0.68
CD4-209ENST00000539492 IBTKQ9P2D0 1353 aaPredicted RBP10.78□□□□□ -0.68
CD4-209ENST00000539492 RIC1Q4ADV7 1423 aa10.78□□□□□ -0.68
CD4-209ENST00000539492 SNED1Q8TER0 1413 aa10.78□□□□□ -0.68
CD4-209ENST00000539492 FAM177BA6PVY3 158 aa10.78□□□□□ -0.68
CD4-209ENST00000539492 CAPN15O75808 1086 aa10.78□□□□□ -0.68
CD4-209ENST00000539492 NEFMP07197 916 aa10.78□□□□□ -0.68
CD4-209ENST00000539492 GTF2E1P29083 439 aaPredicted RBP10.78□□□□□ -0.68
CD4-209ENST00000539492 HLFQ16534 295 aa10.78□□□□□ -0.68
CD4-209ENST00000539492 OLFM4Q6UX06 510 aa10.78□□□□□ -0.68
CD4-209ENST00000539492 PNISRQ8TF01 805 aaKnown RBP10.78□□□□□ -0.68
CD4-209ENST00000539492 NYXQ9GZU5 481 aa10.78□□□□□ -0.68
CD4-209ENST00000539492 MKRN1Q9UHC7 482 aaKnown RBP10.78□□□□□ -0.68
CD4-209ENST00000539492 HACL1Q9UJ83 578 aa10.78□□□□□ -0.68
CD4-209ENST00000539492 ABCC12Q96J65 1359 aa10.77□□□□□ -0.68
CD4-209ENST00000539492 ANKRD36CQ5JPF3 1778 aa10.77□□□□□ -0.68
CD4-209ENST00000539492 ERVV-1B6SEH8 477 aa10.77□□□□□ -0.69
CD4-209ENST00000539492 IARSP41252 1262 aaKnown RBP10.77□□□□□ -0.69
CD4-209ENST00000539492 CRY2Q49AN0 593 aa10.77□□□□□ -0.69
CD4-209ENST00000539492 PSMD1Q99460 953 aa10.77□□□□□ -0.69
CD4-209ENST00000539492 MAP3K15Q6ZN16 1313 aa10.77□□□□□ -0.69
CD4-209ENST00000539492 FZD9O00144 591 aa10.76□□□□□ -0.69
CD4-209ENST00000539492 EPHX2P34913 555 aa10.76□□□□□ -0.69
CD4-209ENST00000539492 EAPPQ56P03 285 aaPredicted RBP10.76□□□□□ -0.69
CD4-209ENST00000539492 CC2D2BQ6DHV5 1058 aa10.76□□□□□ -0.69
CD4-209ENST00000539492 KIF6Q6ZMV9 814 aa10.76□□□□□ -0.69
CD4-209ENST00000539492 SYNE4Q8N205 404 aa10.76□□□□□ -0.69
CD4-209ENST00000539492 MIS18AQ9NYP9 233 aa10.76□□□□□ -0.69
CD4-209ENST00000539492 LAMB2P55268 1798 aa10.75□□□□□ -0.69
CD4-209ENST00000539492 TMEM88BA6NKF7 163 aa10.75□□□□□ -0.69
CD4-209ENST00000539492 ITGBL1O95965 494 aaPredicted RBP10.75□□□□□ -0.69
CD4-209ENST00000539492 EIF4A1P60842 406 aaKnown RBP10.75□□□□□ -0.69
CD4-209ENST00000539492 PNMA8AQ86V59 439 aaPredicted RBP10.75□□□□□ -0.69
CD4-209ENST00000539492 NUTM1Q86Y26 1132 aa10.75□□□□□ -0.69
CD4-209ENST00000539492 GPC2Q8N158 579 aa10.75□□□□□ -0.69
CD4-209ENST00000539492 NGEFQ8N5V2 710 aa10.75□□□□□ -0.69
CD4-209ENST00000539492 JDP2Q8WYK2 163 aa10.75□□□□□ -0.69
CD4-209ENST00000539492 RNF123Q5XPI4 1314 aa10.75□□□□□ -0.69
CD4-209ENST00000539492 LTBP1Q14766 1721 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms