RNA–Protein interactions for RNA: ENST00000539449.2

RTN4IP1-204, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2 BASIC

Gene RTN4IP1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-204ENST00000539449 ASAP1Q9ULH1 1129 aa11.73□□□□□ -0.53
RTN4IP1-204ENST00000539449 COG6Q9Y2V7 657 aa11.73□□□□□ -0.53
RTN4IP1-204ENST00000539449 LAMB4A4D0S4 1761 aa11.72□□□□□ -0.53
RTN4IP1-204ENST00000539449 CICQ96RK0 1608 aaPredicted RBP11.72□□□□□ -0.53
RTN4IP1-204ENST00000539449 PDE3AQ14432 1141 aa11.72□□□□□ -0.53
RTN4IP1-204ENST00000539449 HDGFL1Q5TGJ6 251 aa11.72□□□□□ -0.53
RTN4IP1-204ENST00000539449 ATF7IPQ6VMQ6 1270 aa11.72□□□□□ -0.53
RTN4IP1-204ENST00000539449 COL23A1Q86Y22 540 aaPredicted RBP11.72□□□□□ -0.53
RTN4IP1-204ENST00000539449 USP16Q9Y5T5 823 aa11.72□□□□□ -0.53
RTN4IP1-204ENST00000539449 SOS1Q07889 1333 aaPredicted RBP11.71□□□□□ -0.53
RTN4IP1-204ENST00000539449 FSTL1Q12841 308 aa11.71□□□□□ -0.53
RTN4IP1-204ENST00000539449 PROSER3Q2NL68 480 aa11.71□□□□□ -0.53
RTN4IP1-204ENST00000539449 CCDC30Q5VVM6 783 aa11.71□□□□□ -0.53
RTN4IP1-204ENST00000539449 ERICH6BQ5W0A0 696 aa11.71□□□□□ -0.53
RTN4IP1-204ENST00000539449 TTC5Q8N0Z6 440 aa11.71□□□□□ -0.53
RTN4IP1-204ENST00000539449 TMEM57Q8N5G2 664 aa11.71□□□□□ -0.53
RTN4IP1-204ENST00000539449 PHAXQ9H814 394 aaKnown RBP11.71□□□□□ -0.53
RTN4IP1-204ENST00000539449 CHPF2Q9P2E5 772 aa11.71□□□□□ -0.53
RTN4IP1-204ENST00000539449 LY75O60449 1722 aa11.71□□□□□ -0.54
RTN4IP1-204ENST00000539449 KIF16BQ96L93 1317 aa11.7□□□□□ -0.54
RTN4IP1-204ENST00000539449 PTCD1O75127 700 aaKnown RBP11.7□□□□□ -0.54
RTN4IP1-204ENST00000539449 HOXB7P09629 217 aa11.7□□□□□ -0.54
RTN4IP1-204ENST00000539449 PDIA6Q15084 440 aa11.7□□□□□ -0.54
RTN4IP1-204ENST00000539449 C16orf71Q8IYS4 520 aaPredicted RBP11.7□□□□□ -0.54
RTN4IP1-204ENST00000539449 DZIP1LQ8IYY4 767 aaKnown RBP11.7□□□□□ -0.54
RTN4IP1-204ENST00000539449 SYTL4Q96C24 671 aaPredicted RBP11.7□□□□□ -0.54
RTN4IP1-204ENST00000539449 FMNL2Q96PY5 1086 aa11.7□□□□□ -0.54
RTN4IP1-204ENST00000539449 SLC4A9Q96Q91 983 aa11.7□□□□□ -0.54
RTN4IP1-204ENST00000539449 PPP4R2Q9NY27 417 aa11.7□□□□□ -0.54
RTN4IP1-204ENST00000539449 TJP1Q07157 1748 aa11.69□□□□□ -0.54
RTN4IP1-204ENST00000539449 IPO8O15397 1037 aaKnown RBP11.69□□□□□ -0.54
RTN4IP1-204ENST00000539449 SNRPA1P09661 255 aaKnown RBP11.69□□□□□ -0.54
RTN4IP1-204ENST00000539449 PIP4K2AP48426 406 aaPredicted RBP11.69□□□□□ -0.54
RTN4IP1-204ENST00000539449 B4GALNT3Q6L9W6 998 aa11.69□□□□□ -0.54
RTN4IP1-204ENST00000539449 ARHGAP45Q92619 1136 aa11.69□□□□□ -0.54
RTN4IP1-204ENST00000539449 STK31Q9BXU1 1019 aa11.69□□□□□ -0.54
RTN4IP1-204ENST00000539449 F6X3S4 739 aa11.68□□□□□ -0.54
RTN4IP1-204ENST00000539449 ABCC4O15439 1325 aa11.67□□□□□ -0.54
RTN4IP1-204ENST00000539449 FLIIQ13045 1269 aa11.67□□□□□ -0.54
RTN4IP1-204ENST00000539449 MVPQ14764 893 aaKnown RBP11.67□□□□□ -0.54
RTN4IP1-204ENST00000539449 DNAJC10Q8IXB1 793 aa11.67□□□□□ -0.54
RTN4IP1-204ENST00000539449 RBM42Q9BTD8 480 aaKnown RBP11.67□□□□□ -0.54
RTN4IP1-204ENST00000539449 API5Q9BZZ5 524 aaKnown RBP11.67□□□□□ -0.54
RTN4IP1-204ENST00000539449 NBPF26B4DH59 902 aa11.66□□□□□ -0.54
RTN4IP1-204ENST00000539449 A1BGP04217 495 aa11.66□□□□□ -0.54
RTN4IP1-204ENST00000539449 FAM161AQ3B820 660 aa11.66□□□□□ -0.54
RTN4IP1-204ENST00000539449 NBPF10Q6P3W6 841 aaKnown RBP11.66□□□□□ -0.54
RTN4IP1-204ENST00000539449 LRP10Q7Z4F1 713 aa11.66□□□□□ -0.54
RTN4IP1-204ENST00000539449 FTSJ3Q8IY81 847 aaKnown RBP11.66□□□□□ -0.54
RTN4IP1-204ENST00000539449 NBPF15Q8N660 670 aa11.66□□□□□ -0.54
RTN4IP1-204ENST00000539449 N4BP2Q86UW6 1770 aaPredicted RBP11.66□□□□□ -0.54
RTN4IP1-204ENST00000539449 PTPRCP08575 1304 aa11.65□□□□□ -0.54
RTN4IP1-204ENST00000539449 MYL6BP14649 208 aa11.65□□□□□ -0.54
RTN4IP1-204ENST00000539449 ITPRIPQ8IWB1 547 aa11.65□□□□□ -0.54
RTN4IP1-204ENST00000539449 DDX21Q9NR30 783 aaKnown RBP eCLIP11.65□□□□□ -0.54
RTN4IP1-204ENST00000539449 DBF4Q9UBU7 674 aaPredicted RBP11.65□□□□□ -0.54
RTN4IP1-204ENST00000539449 MS4A1P11836 297 aa11.64□□□□□ -0.55
RTN4IP1-204ENST00000539449 FKBP5Q13451 457 aaPredicted RBP11.64□□□□□ -0.55
RTN4IP1-204ENST00000539449 CCNL1Q9UK58 526 aaPredicted RBP11.64□□□□□ -0.55
RTN4IP1-204ENST00000539449 MYH14Q7Z406 1995 aaKnown RBP11.63□□□□□ -0.55
RTN4IP1-204ENST00000539449 ZBTB7BO15156 539 aaPredicted RBP11.63□□□□□ -0.55
RTN4IP1-204ENST00000539449 AIMP1Q12904 312 aaKnown RBP11.63□□□□□ -0.55
RTN4IP1-204ENST00000539449 INTS3Q68E01 1043 aaKnown RBP11.63□□□□□ -0.55
RTN4IP1-204ENST00000539449 SLC4A10Q6U841 1118 aa11.63□□□□□ -0.55
RTN4IP1-204ENST00000539449 XAGE3Q8WTP9 111 aa11.63□□□□□ -0.55
RTN4IP1-204ENST00000539449 HYPKQ9NX55 129 aa11.63□□□□□ -0.55
RTN4IP1-204ENST00000539449 PCDHB15Q9Y5E8 787 aa11.63□□□□□ -0.55
RTN4IP1-204ENST00000539449 ARFGEF2Q9Y6D5 1785 aa11.62□□□□□ -0.55
RTN4IP1-204ENST00000539449 PI4KAP2A4QPH2 592 aa11.62□□□□□ -0.55
RTN4IP1-204ENST00000539449 CYP19A1P11511 503 aaPredicted RBP11.62□□□□□ -0.55
RTN4IP1-204ENST00000539449 ITPK1Q13572 414 aa11.62□□□□□ -0.55
RTN4IP1-204ENST00000539449 COPS6Q7L5N1 327 aa11.62□□□□□ -0.55
RTN4IP1-204ENST00000539449 VSIG10Q8N0Z9 540 aa11.62□□□□□ -0.55
RTN4IP1-204ENST00000539449 PI4KAP1Q8N8J0 262 aa11.62□□□□□ -0.55
RTN4IP1-204ENST00000539449 CCDC136Q96JN2 1154 aa11.62□□□□□ -0.55
RTN4IP1-204ENST00000539449 COL5A3P25940 1745 aaPredicted RBP11.62□□□□□ -0.55
RTN4IP1-204ENST00000539449 PALLDQ8WX93 1383 aa11.62□□□□□ -0.55
RTN4IP1-204ENST00000539449 C10orf71Q711Q0 1435 aa11.61□□□□□ -0.55
RTN4IP1-204ENST00000539449 TTLL7Q6ZT98 887 aa11.61□□□□□ -0.55
RTN4IP1-204ENST00000539449 SMC1BQ8NDV3 1235 aa11.61□□□□□ -0.55
RTN4IP1-204ENST00000539449 FLAD1Q8NFF5 587 aa11.61□□□□□ -0.55
RTN4IP1-204ENST00000539449 ZBTB40Q9NUA8 1239 aa11.61□□□□□ -0.55
RTN4IP1-204ENST00000539449 DDX19BQ9UMR2 479 aa11.61□□□□□ -0.55
RTN4IP1-204ENST00000539449 ZNF831Q5JPB2 1677 aa11.6□□□□□ -0.55
RTN4IP1-204ENST00000539449 TNRC6CQ9HCJ0 1690 aaKnown RBP11.6□□□□□ -0.55
RTN4IP1-204ENST00000539449 LOC102724428A0A0B4J2F2 783 aa11.6□□□□□ -0.55
RTN4IP1-204ENST00000539449 IGHDP01880 384 aa11.6□□□□□ -0.55
RTN4IP1-204ENST00000539449 ATP6V1AP38606 617 aa11.6□□□□□ -0.55
RTN4IP1-204ENST00000539449 SIK1P57059 783 aa11.6□□□□□ -0.55
RTN4IP1-204ENST00000539449 KSR2Q6VAB6 950 aa11.6□□□□□ -0.55
RTN4IP1-204ENST00000539449 DNAAF4Q8WXU2 420 aa11.6□□□□□ -0.55
RTN4IP1-204ENST00000539449 CHMP4AQ9BY43 222 aa11.6□□□□□ -0.55
RTN4IP1-204ENST00000539449 C1orf115Q9H7X2 142 aa11.6□□□□□ -0.55
RTN4IP1-204ENST00000539449 MAP3K2Q9Y2U5 619 aa11.6□□□□□ -0.55
RTN4IP1-204ENST00000539449 TAF1LQ8IZX4 1826 aa11.6□□□□□ -0.55
RTN4IP1-204ENST00000539449 KIAA1551Q9HCM1 1747 aa11.6□□□□□ -0.55
RTN4IP1-204ENST00000539449 ERBB4Q15303 1308 aa11.6□□□□□ -0.55
RTN4IP1-204ENST00000539449 AFDNP55196 1824 aaKnown RBP11.59□□□□□ -0.55
RTN4IP1-204ENST00000539449 BEND3Q5T5X7 828 aa11.59□□□□□ -0.55
RTN4IP1-204ENST00000539449 INTS5Q6P9B9 1019 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms