RNA–Protein interactions for RNA: ENST00000539194.5

PROM1-219, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-219ENST00000539194 TM6SF1Q9BZW5 370 aa8.44□□□□□ -1.06
PROM1-219ENST00000539194 PI4KAP2A4QPH2 592 aa8.43□□□□□ -1.06
PROM1-219ENST00000539194 OFD1O75665 1012 aa8.43□□□□□ -1.06
PROM1-219ENST00000539194 PI4KAP1Q8N8J0 262 aa8.43□□□□□ -1.06
PROM1-219ENST00000539194 ZSWIM6Q9HCJ5 1215 aa8.43□□□□□ -1.06
PROM1-219ENST00000539194 AXIN2Q9Y2T1 843 aa8.43□□□□□ -1.06
PROM1-219ENST00000539194 MEGF6O75095 1541 aa8.43□□□□□ -1.06
PROM1-219ENST00000539194 ALDH1L1O75891 902 aa8.43□□□□□ -1.06
PROM1-219ENST00000539194 GOLGA6L22H0YM25 854 aa8.43□□□□□ -1.06
PROM1-219ENST00000539194 SASH1O94885 1247 aa8.43□□□□□ -1.06
PROM1-219ENST00000539194 LARGE1O95461 756 aa8.43□□□□□ -1.06
PROM1-219ENST00000539194 NUTM1Q86Y26 1132 aa8.43□□□□□ -1.06
PROM1-219ENST00000539194 NHSL1Q5SYE7 1610 aa8.43□□□□□ -1.06
PROM1-219ENST00000539194 KCPQ6ZWJ8 1503 aa8.43□□□□□ -1.06
PROM1-219ENST00000539194 C1orf167Q5SNV9 1468 aa8.42□□□□□ -1.06
PROM1-219ENST00000539194 SOX12O15370 315 aa8.42□□□□□ -1.06
PROM1-219ENST00000539194 GADD45BO75293 160 aaPredicted RBP8.42□□□□□ -1.06
PROM1-219ENST00000539194 TSGA10IPQ3SY00 556 aa8.42□□□□□ -1.06
PROM1-219ENST00000539194 KCNH5Q8NCM2 988 aa8.42□□□□□ -1.06
PROM1-219ENST00000539194 IL1RAPL2Q9NP60 686 aa8.42□□□□□ -1.06
PROM1-219ENST00000539194 PRAMEF22A3QJZ6 481 aa8.42□□□□□ -1.06
PROM1-219ENST00000539194 PTH1RQ03431 593 aa8.42□□□□□ -1.06
PROM1-219ENST00000539194 IGKV5-2P06315 115 aa8.42□□□□□ -1.06
PROM1-219ENST00000539194 AK2P54819 239 aa8.42□□□□□ -1.06
PROM1-219ENST00000539194 ECM29Q5VYK3 1845 aa8.42□□□□□ -1.06
PROM1-219ENST00000539194 MBD3O95983 291 aa8.41□□□□□ -1.06
PROM1-219ENST00000539194 HSP90AA1P07900 732 aaKnown RBP8.41□□□□□ -1.06
PROM1-219ENST00000539194 ADCK5Q3MIX3 580 aa8.41□□□□□ -1.06
PROM1-219ENST00000539194 NUTM2GQ5VZR2 741 aa8.41□□□□□ -1.06
PROM1-219ENST00000539194 MYH7P12883 1935 aa8.41□□□□□ -1.06
PROM1-219ENST00000539194 RFX5P48382 616 aaPredicted RBP8.41□□□□□ -1.06
PROM1-219ENST00000539194 AMOTQ4VCS5 1084 aa8.41□□□□□ -1.06
PROM1-219ENST00000539194 USPL1Q5W0Q7 1092 aa8.41□□□□□ -1.06
PROM1-219ENST00000539194 KSR2Q6VAB6 950 aa8.41□□□□□ -1.06
PROM1-219ENST00000539194 UBE2Q2Q8WVN8 375 aa8.41□□□□□ -1.06
PROM1-219ENST00000539194 NECTIN2Q92692 538 aa8.41□□□□□ -1.06
PROM1-219ENST00000539194 MAP4K1Q92918 833 aa8.41□□□□□ -1.06
PROM1-219ENST00000539194 LRRC59Q96AG4 307 aaKnown RBP8.41□□□□□ -1.06
PROM1-219ENST00000539194 SRGAP3O43295 1099 aa8.41□□□□□ -1.06
PROM1-219ENST00000539194 DBF4Q9UBU7 674 aaPredicted RBP8.41□□□□□ -1.06
PROM1-219ENST00000539194 RFX7Q2KHR2 1363 aa8.41□□□□□ -1.06
PROM1-219ENST00000539194 C4AP0C0L4 1744 aa8.4□□□□□ -1.06
PROM1-219ENST00000539194 C4BP0C0L5 1744 aa8.4□□□□□ -1.06
PROM1-219ENST00000539194 CASP7P55210 303 aa8.4□□□□□ -1.06
PROM1-219ENST00000539194 VPS53Q5VIR6 699 aa8.4□□□□□ -1.06
PROM1-219ENST00000539194 USP48Q86UV5 1035 aa8.4□□□□□ -1.06
PROM1-219ENST00000539194 UPF3BQ9BZI7 483 aaKnown RBP8.4□□□□□ -1.06
PROM1-219ENST00000539194 ANO2Q9NQ90 1003 aa8.4□□□□□ -1.06
PROM1-219ENST00000539194 DCCP43146 1447 aa8.4□□□□□ -1.06
PROM1-219ENST00000539194 COL22A1Q8NFW1 1626 aaPredicted RBP8.4□□□□□ -1.06
PROM1-219ENST00000539194 SYCE3A1L190 88 aa8.4□□□□□ -1.06
PROM1-219ENST00000539194 GCP02774 474 aa8.4□□□□□ -1.06
PROM1-219ENST00000539194 MCM5P33992 734 aa8.4□□□□□ -1.06
PROM1-219ENST00000539194 ERBB3P21860 1342 aa8.4□□□□□ -1.06
PROM1-219ENST00000539194 ZKSCAN5Q9Y2L8 839 aa8.4□□□□□ -1.07
PROM1-219ENST00000539194 ARAP2Q8WZ64 1704 aa8.4□□□□□ -1.07
PROM1-219ENST00000539194 SURF6O75683 361 aaKnown RBP8.39□□□□□ -1.07
PROM1-219ENST00000539194 ZSCAN22P10073 491 aaPredicted RBP8.39□□□□□ -1.07
PROM1-219ENST00000539194 SYT1P21579 422 aa8.39□□□□□ -1.07
PROM1-219ENST00000539194 RILPL2Q969X0 211 aa8.39□□□□□ -1.07
PROM1-219ENST00000539194 ARXQ96QS3 562 aa8.39□□□□□ -1.07
PROM1-219ENST00000539194 MTMR6Q9Y217 621 aa8.39□□□□□ -1.07
PROM1-219ENST00000539194 BTBD11A6QL63 1104 aa8.39□□□□□ -1.07
PROM1-219ENST00000539194 GLRX3O76003 335 aaKnown RBP8.39□□□□□ -1.07
PROM1-219ENST00000539194 PRKCSHP14314 528 aaPredicted RBP8.39□□□□□ -1.07
PROM1-219ENST00000539194 RABL6Q3YEC7 729 aaPredicted RBP8.39□□□□□ -1.07
PROM1-219ENST00000539194 SUCLG2Q96I99 432 aa8.39□□□□□ -1.07
PROM1-219ENST00000539194 WDR33Q9C0J8 1336 aaKnown RBP8.39□□□□□ -1.07
PROM1-219ENST00000539194 AKAP11Q9UKA4 1901 aa8.39□□□□□ -1.07
PROM1-219ENST00000539194 ANKRD36CQ5JPF3 1778 aa8.39□□□□□ -1.07
PROM1-219ENST00000539194 CCDC171Q6TFL3 1326 aa8.39□□□□□ -1.07
PROM1-219ENST00000539194 EAF2Q96CJ1 260 aaPredicted RBP8.39□□□□□ -1.07
PROM1-219ENST00000539194 LIMCH1Q9UPQ0 1083 aa8.39□□□□□ -1.07
PROM1-219ENST00000539194 MAP3K2Q9Y2U5 619 aa8.39□□□□□ -1.07
PROM1-219ENST00000539194 AP5Z1O43299 807 aa8.38□□□□□ -1.07
PROM1-219ENST00000539194 MCCP23508 829 aa8.38□□□□□ -1.07
PROM1-219ENST00000539194 RBM43Q6ZSC3 357 aaKnown RBP8.38□□□□□ -1.07
PROM1-219ENST00000539194 CNTROBQ8N137 903 aa8.38□□□□□ -1.07
PROM1-219ENST00000539194 LINS1Q8NG48 757 aa8.38□□□□□ -1.07
PROM1-219ENST00000539194 DDX21Q9NR30 783 aaKnown RBP eCLIP8.38□□□□□ -1.07
PROM1-219ENST00000539194 HSP90AB4PQ58FF6 505 aa8.38□□□□□ -1.07
PROM1-219ENST00000539194 TAF6LQ9Y6J9 622 aa8.38□□□□□ -1.07
PROM1-219ENST00000539194 ANXA1P04083 346 aa8.38□□□□□ -1.07
PROM1-219ENST00000539194 MPRIPQ6WCQ1 1025 aa8.38□□□□□ -1.07
PROM1-219ENST00000539194 ECHDC1Q9NTX5 307 aa8.38□□□□□ -1.07
PROM1-219ENST00000539194 TRIM6-TRIM34B2RNG4 842 aa8.37□□□□□ -1.07
PROM1-219ENST00000539194 MAP4K4O95819 1239 aaPredicted RBP8.37□□□□□ -1.07
PROM1-219ENST00000539194 F13A1P00488 732 aa8.37□□□□□ -1.07
PROM1-219ENST00000539194 CWF19L2Q2TBE0 894 aaKnown RBP8.37□□□□□ -1.07
PROM1-219ENST00000539194 TLR7Q9NYK1 1049 aaKnown RBP8.37□□□□□ -1.07
PROM1-219ENST00000539194 TNS2Q63HR2 1409 aa8.37□□□□□ -1.07
PROM1-219ENST00000539194 WNK3Q9BYP7 1800 aa8.37□□□□□ -1.07
PROM1-219ENST00000539194 TOB2Q14106 344 aaPredicted RBP8.37□□□□□ -1.07
PROM1-219ENST00000539194 ME3Q16798 604 aa8.37□□□□□ -1.07
PROM1-219ENST00000539194 UVSSAQ2YD98 709 aa8.37□□□□□ -1.07
PROM1-219ENST00000539194 EPHA10Q5JZY3 1008 aa8.37□□□□□ -1.07
PROM1-219ENST00000539194 EVI5LQ96CN4 794 aa8.37□□□□□ -1.07
PROM1-219ENST00000539194 ORAI2Q96SN7 254 aa8.37□□□□□ -1.07
PROM1-219ENST00000539194 CHMP4AQ9BY43 222 aa8.37□□□□□ -1.07
PROM1-219ENST00000539194 BICC1Q9H694 974 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms