RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 IL6STP40189 918 aaPredicted RBP19.41■□□□□ 0.7
VAMP1-207ENST00000539047 CRKLP46109 303 aaKnown RBP19.41■□□□□ 0.7
VAMP1-207ENST00000539047 NBPF14Q5TI25 921 aa19.41■□□□□ 0.7
VAMP1-207ENST00000539047 NBPF10Q6P3W6 841 aaKnown RBP19.41■□□□□ 0.7
VAMP1-207ENST00000539047 NBPF15Q8N660 670 aa19.41■□□□□ 0.7
VAMP1-207ENST00000539047 PLBD2Q8NHP8 589 aa19.41■□□□□ 0.7
VAMP1-207ENST00000539047 C4BP0C0L5 1744 aa19.4■□□□□ 0.7
VAMP1-207ENST00000539047 GNAI3P08754 354 aa19.4■□□□□ 0.7
VAMP1-207ENST00000539047 HDAC5Q9UQL6 1122 aa19.4■□□□□ 0.7
VAMP1-207ENST00000539047 CNTNAP4Q9C0A0 1308 aa19.4■□□□□ 0.7
VAMP1-207ENST00000539047 ALDH1L1O75891 902 aa19.39■□□□□ 0.69
VAMP1-207ENST00000539047 SF3B2Q13435 895 aaKnown RBP19.39■□□□□ 0.69
VAMP1-207ENST00000539047 ITPK1Q13572 414 aa19.39■□□□□ 0.69
VAMP1-207ENST00000539047 PTF1AQ7RTS3 328 aa19.39■□□□□ 0.69
VAMP1-207ENST00000539047 ARXQ96QS3 562 aa19.39■□□□□ 0.69
VAMP1-207ENST00000539047 ZBTB1Q9Y2K1 713 aa19.39■□□□□ 0.69
VAMP1-207ENST00000539047 MYH14Q7Z406 1995 aaKnown RBP19.39■□□□□ 0.69
VAMP1-207ENST00000539047 SLC27A3Q5K4L6 730 aa19.38■□□□□ 0.69
VAMP1-207ENST00000539047 B4GALNT3Q6L9W6 998 aa19.38■□□□□ 0.69
VAMP1-207ENST00000539047 BCORQ6W2J9 1755 aa19.38■□□□□ 0.69
VAMP1-207ENST00000539047 LRP10Q7Z4F1 713 aa19.38■□□□□ 0.69
VAMP1-207ENST00000539047 LINS1Q8NG48 757 aa19.38■□□□□ 0.69
VAMP1-207ENST00000539047 A0A087WZG4 1122 aa19.37■□□□□ 0.69
VAMP1-207ENST00000539047 METTL22Q9BUU2 404 aaPredicted RBP19.37■□□□□ 0.69
VAMP1-207ENST00000539047 ZBTB40Q9NUA8 1239 aa19.37■□□□□ 0.69
VAMP1-207ENST00000539047 NUP98P52948 1817 aa19.37■□□□□ 0.69
VAMP1-207ENST00000539047 ZBTB7BO15156 539 aaPredicted RBP19.36■□□□□ 0.69
VAMP1-207ENST00000539047 BEND3Q5T5X7 828 aa19.36■□□□□ 0.69
VAMP1-207ENST00000539047 RC3H1Q5TC82 1133 aaKnown RBP19.36■□□□□ 0.69
VAMP1-207ENST00000539047 MYD88Q99836 296 aa19.36■□□□□ 0.69
VAMP1-207ENST00000539047 COL15A1P39059 1388 aa19.35■□□□□ 0.69
VAMP1-207ENST00000539047 IBTKQ9P2D0 1353 aaPredicted RBP19.35■□□□□ 0.69
VAMP1-207ENST00000539047 MAP3K15Q6ZN16 1313 aa19.35■□□□□ 0.69
VAMP1-207ENST00000539047 UBTFL1P0CB47 393 aaPredicted RBP19.35■□□□□ 0.69
VAMP1-207ENST00000539047 HSP90AB3PQ58FF7 597 aa19.35■□□□□ 0.69
VAMP1-207ENST00000539047 LINC00116Q8NCU8 138 aa19.35■□□□□ 0.69
VAMP1-207ENST00000539047 ZBTB3Q9H5J0 574 aa19.35■□□□□ 0.69
VAMP1-207ENST00000539047 SCN7AQ01118 1682 aa19.35■□□□□ 0.69
VAMP1-207ENST00000539047 APBA3O96018 575 aa19.34■□□□□ 0.69
VAMP1-207ENST00000539047 INTS5Q6P9B9 1019 aaKnown RBP19.34■□□□□ 0.69
VAMP1-207ENST00000539047 TTLL7Q6ZT98 887 aa19.34■□□□□ 0.69
VAMP1-207ENST00000539047 DZIP3Q86Y13 1208 aaKnown RBP19.34■□□□□ 0.69
VAMP1-207ENST00000539047 PELP1Q8IZL8 1130 aaKnown RBP19.34■□□□□ 0.69
VAMP1-207ENST00000539047 AK7Q96M32 723 aa19.34■□□□□ 0.69
VAMP1-207ENST00000539047 RWDD1Q9H446 243 aaPredicted RBP19.34■□□□□ 0.69
VAMP1-207ENST00000539047 C9orf78Q9NZ63 289 aaPredicted RBP19.34■□□□□ 0.69
VAMP1-207ENST00000539047 GNAI2P04899 355 aa19.33■□□□□ 0.68
VAMP1-207ENST00000539047 CENPQQ7L2Z9 268 aaPredicted RBP19.33■□□□□ 0.68
VAMP1-207ENST00000539047 MEIS3Q99687 375 aa19.33■□□□□ 0.68
VAMP1-207ENST00000539047 ZNF652Q9Y2D9 606 aa19.33■□□□□ 0.68
VAMP1-207ENST00000539047 ERVV-1B6SEH8 477 aa19.32■□□□□ 0.68
VAMP1-207ENST00000539047 PLSCR1O15162 318 aa19.32■□□□□ 0.68
VAMP1-207ENST00000539047 EIF5P55010 431 aaKnown RBP19.32■□□□□ 0.68
VAMP1-207ENST00000539047 RTCBQ9Y3I0 505 aaKnown RBP19.32■□□□□ 0.68
VAMP1-207ENST00000539047 UBR3Q6ZT12 1888 aa19.31■□□□□ 0.68
VAMP1-207ENST00000539047 GNPATO15228 680 aa19.31■□□□□ 0.68
VAMP1-207ENST00000539047 C4AP0C0L4 1744 aa19.31■□□□□ 0.68
VAMP1-207ENST00000539047 NEURL1BA8MQ27 555 aa19.3■□□□□ 0.68
VAMP1-207ENST00000539047 HMMRO75330 724 aa19.3■□□□□ 0.68
VAMP1-207ENST00000539047 KCNQ4P56696 695 aa19.3■□□□□ 0.68
VAMP1-207ENST00000539047 CWF19L2Q2TBE0 894 aaKnown RBP19.3■□□□□ 0.68
VAMP1-207ENST00000539047 GRM8O00222 908 aa19.29■□□□□ 0.68
VAMP1-207ENST00000539047 RPS6KA4O75676 772 aa19.29■□□□□ 0.68
VAMP1-207ENST00000539047 BAG6P46379 1132 aa19.29■□□□□ 0.68
VAMP1-207ENST00000539047 TXNRD1Q16881 649 aa19.29■□□□□ 0.68
VAMP1-207ENST00000539047 GIGYF2Q6Y7W6 1299 aaKnown RBP19.29■□□□□ 0.68
VAMP1-207ENST00000539047 C1orf115Q9H7X2 142 aa19.29■□□□□ 0.68
VAMP1-207ENST00000539047 CWC25Q9NXE8 425 aaPredicted RBP19.29■□□□□ 0.68
VAMP1-207ENST00000539047 TCIRG1Q13488 830 aa19.28■□□□□ 0.68
VAMP1-207ENST00000539047 GCKRQ14397 625 aa19.28■□□□□ 0.68
VAMP1-207ENST00000539047 RPAP2Q8IXW5 612 aaPredicted RBP19.28■□□□□ 0.68
VAMP1-207ENST00000539047 CCDC191Q8NCU4 936 aa19.28■□□□□ 0.68
VAMP1-207ENST00000539047 USP44Q9H0E7 712 aa19.28■□□□□ 0.68
VAMP1-207ENST00000539047 TBC1D2BQ9UPU7 963 aa19.28■□□□□ 0.68
VAMP1-207ENST00000539047 PCDHB15Q9Y5E8 787 aa19.28■□□□□ 0.68
VAMP1-207ENST00000539047 RGL2O15211 777 aa19.27■□□□□ 0.68
VAMP1-207ENST00000539047 IGKV5-2P06315 115 aa19.27■□□□□ 0.68
VAMP1-207ENST00000539047 ADRA2BP18089 450 aa19.27■□□□□ 0.68
VAMP1-207ENST00000539047 EN1Q05925 392 aaPredicted RBP19.27■□□□□ 0.68
VAMP1-207ENST00000539047 HDAC1Q13547 482 aaPredicted RBP19.27■□□□□ 0.68
VAMP1-207ENST00000539047 ATP5J2-PTCD1G3V325 749 aa19.26■□□□□ 0.67
VAMP1-207ENST00000539047 ZPR1O75312 459 aa19.25■□□□□ 0.67
VAMP1-207ENST00000539047 ANKRD44Q8N8A2 993 aa19.25■□□□□ 0.67
VAMP1-207ENST00000539047 LRRFIP2Q9Y608 721 aaKnown RBP19.25■□□□□ 0.67
VAMP1-207ENST00000539047 UTYO14607 1347 aa19.25■□□□□ 0.67
VAMP1-207ENST00000539047 PSDA5PKW4 1024 aaPredicted RBP19.24■□□□□ 0.67
VAMP1-207ENST00000539047 TRIM28Q13263 835 aaKnown RBP19.24■□□□□ 0.67
VAMP1-207ENST00000539047 TRAPPC3LQ5T215 181 aa19.24■□□□□ 0.67
VAMP1-207ENST00000539047 ISCA1Q9BUE6 129 aa19.24■□□□□ 0.67
VAMP1-207ENST00000539047 LRRC4BQ9NT99 713 aa19.24■□□□□ 0.67
VAMP1-207ENST00000539047 KDM2BQ8NHM5 1336 aa19.24■□□□□ 0.67
VAMP1-207ENST00000539047 MYH3P11055 1940 aa19.23■□□□□ 0.67
VAMP1-207ENST00000539047 CAMTA2O94983 1202 aa19.23■□□□□ 0.67
VAMP1-207ENST00000539047 SSFA2P28290 1259 aa19.23■□□□□ 0.67
VAMP1-207ENST00000539047 RFC4P35249 363 aa19.23■□□□□ 0.67
VAMP1-207ENST00000539047 CEP85Q6P2H3 762 aa19.23■□□□□ 0.67
VAMP1-207ENST00000539047 CLEC4GQ6UXB4 293 aa19.23■□□□□ 0.67
VAMP1-207ENST00000539047 ZBTB47Q9UFB7 747 aaPredicted RBP19.23■□□□□ 0.67
VAMP1-207ENST00000539047 LAMB2P55268 1798 aa19.22■□□□□ 0.67
VAMP1-207ENST00000539047 PHF14O94880 888 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms