RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 CCDC24Q8N4L8 307 aa16.65■□□□□ 0.26
VAMP1-206ENST00000538970 CNBD1Q8NA66 436 aa16.65■□□□□ 0.26
VAMP1-206ENST00000538970 SETDB2Q96T68 719 aa16.65■□□□□ 0.26
VAMP1-206ENST00000538970 ZNF622Q969S3 477 aaKnown RBP eCLIP16.64■□□□□ 0.25
VAMP1-206ENST00000538970 LAMB4A4D0S4 1761 aa16.64■□□□□ 0.25
VAMP1-206ENST00000538970 NBPF26B4DH59 902 aa16.63■□□□□ 0.25
VAMP1-206ENST00000538970 NBPF10Q6P3W6 841 aaKnown RBP16.63■□□□□ 0.25
VAMP1-206ENST00000538970 NBPF15Q8N660 670 aa16.63■□□□□ 0.25
VAMP1-206ENST00000538970 ST5P78524 1137 aa16.62■□□□□ 0.25
VAMP1-206ENST00000538970 TAF7Q15545 349 aaPredicted RBP16.62■□□□□ 0.25
VAMP1-206ENST00000538970 CLEC4GQ6UXB4 293 aa16.62■□□□□ 0.25
VAMP1-206ENST00000538970 KDM3BQ7LBC6 1761 aa16.61■□□□□ 0.25
VAMP1-206ENST00000538970 RGL2O15211 777 aa16.61■□□□□ 0.25
VAMP1-206ENST00000538970 NPHP1O15259 732 aa16.61■□□□□ 0.25
VAMP1-206ENST00000538970 FOXN1O15353 648 aa16.61■□□□□ 0.25
VAMP1-206ENST00000538970 C21orf2O43822 256 aa16.61■□□□□ 0.25
VAMP1-206ENST00000538970 PLEKHF1Q96S99 279 aa16.61■□□□□ 0.25
VAMP1-206ENST00000538970 ZNF652Q9Y2D9 606 aa16.61■□□□□ 0.25
VAMP1-206ENST00000538970 ARFGEF2Q9Y6D5 1785 aa16.6■□□□□ 0.25
VAMP1-206ENST00000538970 GLTPD2A6NH11 291 aa16.6■□□□□ 0.25
VAMP1-206ENST00000538970 NEFMP07197 916 aa16.6■□□□□ 0.25
VAMP1-206ENST00000538970 SRGNP10124 158 aa16.6■□□□□ 0.25
VAMP1-206ENST00000538970 VEGFAP15692 232 aaPredicted RBP16.6■□□□□ 0.25
VAMP1-206ENST00000538970 STYK1Q6J9G0 422 aa16.6■□□□□ 0.25
VAMP1-206ENST00000538970 MIS18AQ9NYP9 233 aa16.6■□□□□ 0.25
VAMP1-206ENST00000538970 ZNF219Q9P2Y4 722 aaPredicted RBP16.6■□□□□ 0.25
VAMP1-206ENST00000538970 MKRN1Q9UHC7 482 aaKnown RBP16.6■□□□□ 0.25
VAMP1-206ENST00000538970 FER1L6Q2WGJ9 1857 aa16.59■□□□□ 0.25
VAMP1-206ENST00000538970 DLG5Q8TDM6 1919 aa16.59■□□□□ 0.25
VAMP1-206ENST00000538970 POTECB2RU33 542 aa16.59■□□□□ 0.25
VAMP1-206ENST00000538970 NBPF5PQ86XG9 351 aaPredicted RBP16.59■□□□□ 0.25
VAMP1-206ENST00000538970 CNKSR1Q969H4 720 aa16.59■□□□□ 0.25
VAMP1-206ENST00000538970 LTBP3Q9NS15 1303 aa16.59■□□□□ 0.25
VAMP1-206ENST00000538970 NFE2L2Q16236 605 aa16.58■□□□□ 0.24
VAMP1-206ENST00000538970 PRPF40BQ6NWY9 871 aaKnown RBP16.58■□□□□ 0.24
VAMP1-206ENST00000538970 PNISRQ8TF01 805 aaKnown RBP16.58■□□□□ 0.24
VAMP1-206ENST00000538970 MASTLQ96GX5 879 aa16.58■□□□□ 0.24
VAMP1-206ENST00000538970 TAOK3Q9H2K8 898 aa16.57■□□□□ 0.24
VAMP1-206ENST00000538970 NIP7Q9Y221 180 aaKnown RBP eCLIP16.57■□□□□ 0.24
VAMP1-206ENST00000538970 SLX4Q8IY92 1834 aa16.56■□□□□ 0.24
VAMP1-206ENST00000538970 FAM161AQ3B820 660 aa16.56■□□□□ 0.24
VAMP1-206ENST00000538970 THUMPD2Q9BTF0 503 aaKnown RBP16.56■□□□□ 0.24
VAMP1-206ENST00000538970 CACNA1SQ13698 1873 aa16.55■□□□□ 0.24
VAMP1-206ENST00000538970 CCDC88AQ3V6T2 1871 aa16.55■□□□□ 0.24
VAMP1-206ENST00000538970 MAPK8IP3Q9UPT6 1336 aa16.55■□□□□ 0.24
VAMP1-206ENST00000538970 KLRG2A4D1S0 409 aaPredicted RBP16.55■□□□□ 0.24
VAMP1-206ENST00000538970 EIF4A1P60842 406 aaKnown RBP16.55■□□□□ 0.24
VAMP1-206ENST00000538970 HLFQ16534 295 aa16.55■□□□□ 0.24
VAMP1-206ENST00000538970 ERFEQ4G0M1 354 aa16.55■□□□□ 0.24
VAMP1-206ENST00000538970 SOGA3Q5TF21 947 aa16.55■□□□□ 0.24
VAMP1-206ENST00000538970 TPTE2Q6XPS3 522 aa16.55■□□□□ 0.24
VAMP1-206ENST00000538970 NPR1P16066 1061 aa16.54■□□□□ 0.24
VAMP1-206ENST00000538970 C7orf43Q8WVR3 580 aa16.54■□□□□ 0.24
VAMP1-206ENST00000538970 PNNQ9H307 717 aaKnown RBP16.54■□□□□ 0.24
VAMP1-206ENST00000538970 DICER1Q9UPY3 1922 aaKnown RBP16.54■□□□□ 0.24
VAMP1-206ENST00000538970 POTEIP0CG38 1075 aa16.53■□□□□ 0.24
VAMP1-206ENST00000538970 POTEJP0CG39 1038 aa16.53■□□□□ 0.24
VAMP1-206ENST00000538970 PRDM10Q9NQV6 1147 aa16.53■□□□□ 0.24
VAMP1-206ENST00000538970 CREBZFQ9NS37 354 aa16.53■□□□□ 0.24
VAMP1-206ENST00000538970 FAM177BA6PVY3 158 aa16.52■□□□□ 0.24
VAMP1-206ENST00000538970 CCDC93Q567U6 631 aa16.52■□□□□ 0.24
VAMP1-206ENST00000538970 DPY19L2Q6NUT2 758 aa16.52■□□□□ 0.24
VAMP1-206ENST00000538970 ABCC12Q96J65 1359 aa16.51■□□□□ 0.23
VAMP1-206ENST00000538970 MAP3K15Q6ZN16 1313 aa16.51■□□□□ 0.23
VAMP1-206ENST00000538970 ERVV-1B6SEH8 477 aa16.51■□□□□ 0.23
VAMP1-206ENST00000538970 RALBP1Q15311 655 aa16.51■□□□□ 0.23
VAMP1-206ENST00000538970 NGEFQ8N5V2 710 aa16.51■□□□□ 0.23
VAMP1-206ENST00000538970 KIF6Q6ZMV9 814 aa16.5■□□□□ 0.23
VAMP1-206ENST00000538970 TTLL7Q6ZT98 887 aa16.5■□□□□ 0.23
VAMP1-206ENST00000538970 RRP7AQ9Y3A4 280 aaKnown RBP16.5■□□□□ 0.23
VAMP1-206ENST00000538970 RIC1Q4ADV7 1423 aa16.5■□□□□ 0.23
VAMP1-206ENST00000538970 CNTNAP1P78357 1384 aa16.5■□□□□ 0.23
VAMP1-206ENST00000538970 IBTKQ9P2D0 1353 aaPredicted RBP16.5■□□□□ 0.23
VAMP1-206ENST00000538970 ERBB4Q15303 1308 aa16.49■□□□□ 0.23
VAMP1-206ENST00000538970 MYL6BP14649 208 aa16.49■□□□□ 0.23
VAMP1-206ENST00000538970 NYXQ9GZU5 481 aa16.49■□□□□ 0.23
VAMP1-206ENST00000538970 UBN2Q6ZU65 1347 aa16.48■□□□□ 0.23
VAMP1-206ENST00000538970 SNED1Q8TER0 1413 aa16.48■□□□□ 0.23
VAMP1-206ENST00000538970 DDNO94850 711 aaPredicted RBP16.48■□□□□ 0.23
VAMP1-206ENST00000538970 GTF2E1P29083 439 aaPredicted RBP16.48■□□□□ 0.23
VAMP1-206ENST00000538970 CTCFP49711 727 aaPredicted RBP16.48■□□□□ 0.23
VAMP1-206ENST00000538970 LBX1P52954 281 aa16.48■□□□□ 0.23
VAMP1-206ENST00000538970 FKBP4Q02790 459 aaKnown RBP eCLIP16.48■□□□□ 0.23
VAMP1-206ENST00000538970 CRY2Q49AN0 593 aa16.48■□□□□ 0.23
VAMP1-206ENST00000538970 CHADLQ6NUI6 762 aa16.48■□□□□ 0.23
VAMP1-206ENST00000538970 OLFM4Q6UX06 510 aa16.48■□□□□ 0.23
VAMP1-206ENST00000538970 NUTM1Q86Y26 1132 aa16.48■□□□□ 0.23
VAMP1-206ENST00000538970 ABHD8Q96I13 439 aa16.48■□□□□ 0.23
VAMP1-206ENST00000538970 ZBTB3Q9H5J0 574 aa16.48■□□□□ 0.23
VAMP1-206ENST00000538970 TSPYL4Q9UJ04 414 aa16.48■□□□□ 0.23
VAMP1-206ENST00000538970 NUP98P52948 1817 aa16.47■□□□□ 0.23
VAMP1-206ENST00000538970 RIPK4P57078 832 aa16.47■□□□□ 0.23
VAMP1-206ENST00000538970 GPTP24298 496 aa16.46■□□□□ 0.23
VAMP1-206ENST00000538970 ALDH1B1P30837 517 aa16.46■□□□□ 0.23
VAMP1-206ENST00000538970 VEGFBP49765 207 aa16.46■□□□□ 0.23
VAMP1-206ENST00000538970 LRP10Q7Z4F1 713 aa16.46■□□□□ 0.23
VAMP1-206ENST00000538970 RTKN2Q8IZC4 609 aa16.46■□□□□ 0.23
VAMP1-206ENST00000538970 ZNF277Q9NRM2 450 aaPredicted RBP16.46■□□□□ 0.23
VAMP1-206ENST00000538970 MYBBP1AQ9BQG0 1328 aaKnown RBP16.45■□□□□ 0.22
VAMP1-206ENST00000538970 TMPOP42166 694 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms