RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 IL1RAPL2Q9NP60 686 aa18.22■□□□□ 0.51
ATL3-203ENST00000538786 BICC1Q9H694 974 aaKnown RBP18.21■□□□□ 0.51
ATL3-203ENST00000538786 EXOC5O00471 708 aa18.21■□□□□ 0.51
ATL3-203ENST00000538786 PIGBQ92521 554 aa18.21■□□□□ 0.51
ATL3-203ENST00000538786 ERC1Q8IUD2 1116 aa18.2■□□□□ 0.5
ATL3-203ENST00000538786 VSIG10Q8N0Z9 540 aa18.2■□□□□ 0.5
ATL3-203ENST00000538786 CDCA7Q9BWT1 371 aaPredicted RBP18.2■□□□□ 0.5
ATL3-203ENST00000538786 ADAMTS2O95450 1211 aa18.19■□□□□ 0.5
ATL3-203ENST00000538786 A1BGP04217 495 aa18.19■□□□□ 0.5
ATL3-203ENST00000538786 OS9Q13438 667 aaPredicted RBP18.19■□□□□ 0.5
ATL3-203ENST00000538786 TSHZ3Q63HK5 1081 aa18.19■□□□□ 0.5
ATL3-203ENST00000538786 TEX13AQ9BXU3 409 aaPredicted RBP18.19■□□□□ 0.5
ATL3-203ENST00000538786 LRP6O75581 1613 aa18.19■□□□□ 0.5
ATL3-203ENST00000538786 COL15A1P39059 1388 aa18.19■□□□□ 0.5
ATL3-203ENST00000538786 NBR1Q14596 966 aa18.18■□□□□ 0.5
ATL3-203ENST00000538786 NUTM1Q86Y26 1132 aa18.18■□□□□ 0.5
ATL3-203ENST00000538786 ASAP1Q9ULH1 1129 aa18.18■□□□□ 0.5
ATL3-203ENST00000538786 THRAP3Q9Y2W1 955 aaKnown RBP18.18■□□□□ 0.5
ATL3-203ENST00000538786 ARFGEF2Q9Y6D5 1785 aa18.18■□□□□ 0.5
ATL3-203ENST00000538786 KIF2CQ99661 725 aa18.17■□□□□ 0.5
ATL3-203ENST00000538786 ATG3Q9NT62 314 aa18.17■□□□□ 0.5
ATL3-203ENST00000538786 SPATA31A1Q5TZJ5 1347 aa18.17■□□□□ 0.5
ATL3-203ENST00000538786 BCL9O00512 1426 aa18.17■□□□□ 0.5
ATL3-203ENST00000538786 PIP4K2BP78356 416 aa18.17■□□□□ 0.5
ATL3-203ENST00000538786 USP26Q9BXU7 913 aa18.17■□□□□ 0.5
ATL3-203ENST00000538786 USP42Q9H9J4 1324 aaKnown RBP18.16■□□□□ 0.5
ATL3-203ENST00000538786 ATP5J2-PTCD1G3V325 749 aa18.16■□□□□ 0.5
ATL3-203ENST00000538786 REC8O95072 547 aa18.16■□□□□ 0.5
ATL3-203ENST00000538786 TTLL7Q6ZT98 887 aa18.16■□□□□ 0.5
ATL3-203ENST00000538786 CLASRPQ8N2M8 674 aaKnown RBP18.16■□□□□ 0.5
ATL3-203ENST00000538786 SNX21Q969T3 373 aa18.16■□□□□ 0.5
ATL3-203ENST00000538786 PA2G4Q9UQ80 394 aaKnown RBP18.16■□□□□ 0.5
ATL3-203ENST00000538786 ERC2O15083 957 aa18.15■□□□□ 0.5
ATL3-203ENST00000538786 NRAPQ86VF7 1730 aa18.15■□□□□ 0.5
ATL3-203ENST00000538786 WNK3Q9BYP7 1800 aa18.15■□□□□ 0.5
ATL3-203ENST00000538786 A0A087WZG4 1122 aa18.15■□□□□ 0.5
ATL3-203ENST00000538786 PI4K2BQ8TCG2 481 aa18.15■□□□□ 0.5
ATL3-203ENST00000538786 TTC41PQ6P2S7 1318 aa18.15■□□□□ 0.5
ATL3-203ENST00000538786 TRIM6-TRIM34B2RNG4 842 aa18.14■□□□□ 0.49
ATL3-203ENST00000538786 G3BP1Q13283 466 aaKnown RBP eCLIP18.14■□□□□ 0.49
ATL3-203ENST00000538786 EPHA10Q5JZY3 1008 aa18.14■□□□□ 0.49
ATL3-203ENST00000538786 UBE3BQ7Z3V4 1068 aa18.14■□□□□ 0.49
ATL3-203ENST00000538786 HSCBQ8IWL3 235 aa18.14■□□□□ 0.49
ATL3-203ENST00000538786 TUBGCP6Q96RT7 1819 aa18.14■□□□□ 0.49
ATL3-203ENST00000538786 NUTM2BA6NNL0 878 aaPredicted RBP18.13■□□□□ 0.49
ATL3-203ENST00000538786 NUTM2EB1AL46 878 aaPredicted RBP18.13■□□□□ 0.49
ATL3-203ENST00000538786 STARD3NLO95772 234 aa18.13■□□□□ 0.49
ATL3-203ENST00000538786 CASP7P55210 303 aa18.13■□□□□ 0.49
ATL3-203ENST00000538786 RABL6Q3YEC7 729 aaPredicted RBP18.13■□□□□ 0.49
ATL3-203ENST00000538786 NUTM2AQ8IVF1 878 aaPredicted RBP18.13■□□□□ 0.49
ATL3-203ENST00000538786 DNAJC10Q8IXB1 793 aa18.13■□□□□ 0.49
ATL3-203ENST00000538786 RILPL2Q969X0 211 aa18.13■□□□□ 0.49
ATL3-203ENST00000538786 CWC25Q9NXE8 425 aaPredicted RBP18.13■□□□□ 0.49
ATL3-203ENST00000538786 NUP188Q5SRE5 1749 aa18.12■□□□□ 0.49
ATL3-203ENST00000538786 H7C1W4 665 aa18.12■□□□□ 0.49
ATL3-203ENST00000538786 CHMLP26374 656 aa18.12■□□□□ 0.49
ATL3-203ENST00000538786 RBM42Q9BTD8 480 aaKnown RBP18.12■□□□□ 0.49
ATL3-203ENST00000538786 SPATA31A5Q5VU36 1347 aa18.12■□□□□ 0.49
ATL3-203ENST00000538786 SPATA31A7Q8IWB4 1347 aa18.12■□□□□ 0.49
ATL3-203ENST00000538786 SLIT2O94813 1529 aa18.12■□□□□ 0.49
ATL3-203ENST00000538786 UBAP1LF5GYI3 381 aa18.11■□□□□ 0.49
ATL3-203ENST00000538786 SASH1O94885 1247 aa18.11■□□□□ 0.49
ATL3-203ENST00000538786 UNC5CLQ8IV45 518 aa18.11■□□□□ 0.49
ATL3-203ENST00000538786 CCDC191Q8NCU4 936 aa18.11■□□□□ 0.49
ATL3-203ENST00000538786 ZBTB3Q9H5J0 574 aa18.11■□□□□ 0.49
ATL3-203ENST00000538786 COPRSQ9NQ92 184 aa18.11■□□□□ 0.49
ATL3-203ENST00000538786 ITGB4P16144 1822 aa18.11■□□□□ 0.49
ATL3-203ENST00000538786 AFDNP55196 1824 aaKnown RBP18.11■□□□□ 0.49
ATL3-203ENST00000538786 GLRX3O76003 335 aaKnown RBP18.11■□□□□ 0.49
ATL3-203ENST00000538786 IFIT2P09913 472 aaKnown RBP18.11■□□□□ 0.49
ATL3-203ENST00000538786 DDB1Q16531 1140 aa18.11■□□□□ 0.49
ATL3-203ENST00000538786 JARID2Q92833 1246 aaPredicted RBP18.11■□□□□ 0.49
ATL3-203ENST00000538786 GPATCH3Q96I76 525 aa18.11■□□□□ 0.49
ATL3-203ENST00000538786 ESYT1Q9BSJ8 1104 aa18.11■□□□□ 0.49
ATL3-203ENST00000538786 ANTXR1Q9H6X2 564 aa18.11■□□□□ 0.49
ATL3-203ENST00000538786 RTL5Q5HYW3 569 aaPredicted RBP18.1■□□□□ 0.49
ATL3-203ENST00000538786 ECHDC1Q9NTX5 307 aa18.1■□□□□ 0.49
ATL3-203ENST00000538786 RFX5P48382 616 aaPredicted RBP18.1■□□□□ 0.49
ATL3-203ENST00000538786 BARGINQ6ZT62 677 aa18.1■□□□□ 0.49
ATL3-203ENST00000538786 SYTL4Q96C24 671 aaPredicted RBP18.1■□□□□ 0.49
ATL3-203ENST00000538786 SLKQ9H2G2 1235 aaPredicted RBP18.1■□□□□ 0.49
ATL3-203ENST00000538786 NWD2Q9ULI1 1742 aa18.09■□□□□ 0.49
ATL3-203ENST00000538786 PRIM1P49642 420 aaKnown RBP18.09■□□□□ 0.49
ATL3-203ENST00000538786 RABEP1Q15276 862 aa18.09■□□□□ 0.49
ATL3-203ENST00000538786 AACSQ86V21 672 aa18.09■□□□□ 0.49
ATL3-203ENST00000538786 CNTROBQ8N137 903 aa18.09■□□□□ 0.49
ATL3-203ENST00000538786 CERKQ8TCT0 537 aa18.09■□□□□ 0.49
ATL3-203ENST00000538786 SIL1Q9H173 461 aa18.08■□□□□ 0.49
ATL3-203ENST00000538786 CYP19A1P11511 503 aaPredicted RBP18.08■□□□□ 0.48
ATL3-203ENST00000538786 FOXO4P98177 505 aa18.08■□□□□ 0.48
ATL3-203ENST00000538786 PTPN12Q05209 780 aaKnown RBP18.08■□□□□ 0.48
ATL3-203ENST00000538786 TCIRG1Q13488 830 aa18.08■□□□□ 0.48
ATL3-203ENST00000538786 KIF6Q6ZMV9 814 aa18.08■□□□□ 0.48
ATL3-203ENST00000538786 KLHDC4Q8TBB5 520 aa18.08■□□□□ 0.48
ATL3-203ENST00000538786 SLC4A9Q96Q91 983 aa18.08■□□□□ 0.48
ATL3-203ENST00000538786 ISCA1Q9BUE6 129 aa18.08■□□□□ 0.48
ATL3-203ENST00000538786 TRIM28Q13263 835 aaKnown RBP18.07■□□□□ 0.48
ATL3-203ENST00000538786 EAF2Q96CJ1 260 aaPredicted RBP18.07■□□□□ 0.48
ATL3-203ENST00000538786 NFKBIBQ15653 356 aa18.06■□□□□ 0.48
ATL3-203ENST00000538786 LMBR1LQ6UX01 489 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms