RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 C20orf194Q5TEA3 1177 aa21.97■■□□□ 1.11
CLN6-202ENST00000538696 ARHGEF1Q92888 912 aaKnown RBP21.97■■□□□ 1.11
CLN6-202ENST00000538696 N4BP2Q86UW6 1770 aaPredicted RBP21.97■■□□□ 1.11
CLN6-202ENST00000538696 TRAPPC3LQ5T215 181 aa21.96■■□□□ 1.11
CLN6-202ENST00000538696 DZIP3Q86Y13 1208 aaKnown RBP21.96■■□□□ 1.11
CLN6-202ENST00000538696 COL23A1Q86Y22 540 aaPredicted RBP21.96■■□□□ 1.11
CLN6-202ENST00000538696 TBC1D2BQ9UPU7 963 aa21.96■■□□□ 1.11
CLN6-202ENST00000538696 NPM2Q86SE8 214 aaKnown RBP21.95■■□□□ 1.1
CLN6-202ENST00000538696 ADCY9O60503 1353 aa21.94■■□□□ 1.1
CLN6-202ENST00000538696 CAMTA2O94983 1202 aa21.94■■□□□ 1.1
CLN6-202ENST00000538696 FLAD1Q8NFF5 587 aa21.94■■□□□ 1.1
CLN6-202ENST00000538696 EXOC6Q8TAG9 804 aa21.94■■□□□ 1.1
CLN6-202ENST00000538696 CRBNQ96SW2 442 aa21.94■■□□□ 1.1
CLN6-202ENST00000538696 SRP68Q9UHB9 627 aaKnown RBP21.94■■□□□ 1.1
CLN6-202ENST00000538696 MAP3K15Q6ZN16 1313 aa21.94■■□□□ 1.1
CLN6-202ENST00000538696 KIF16BQ96L93 1317 aa21.94■■□□□ 1.1
CLN6-202ENST00000538696 USP42Q9H9J4 1324 aaKnown RBP21.94■■□□□ 1.1
CLN6-202ENST00000538696 KIF6Q6ZMV9 814 aa21.93■■□□□ 1.1
CLN6-202ENST00000538696 NARFQ9UHQ1 456 aa21.93■■□□□ 1.1
CLN6-202ENST00000538696 NOB1Q9ULX3 412 aaKnown RBP21.93■■□□□ 1.1
CLN6-202ENST00000538696 AFDNP55196 1824 aaKnown RBP21.93■■□□□ 1.1
CLN6-202ENST00000538696 RFC4P35249 363 aa21.92■■□□□ 1.1
CLN6-202ENST00000538696 FKBP5Q13451 457 aaPredicted RBP21.92■■□□□ 1.1
CLN6-202ENST00000538696 R3HDM1Q15032 1099 aaKnown RBP21.92■■□□□ 1.1
CLN6-202ENST00000538696 ARXQ96QS3 562 aa21.92■■□□□ 1.1
CLN6-202ENST00000538696 ZBTB3Q9H5J0 574 aa21.92■■□□□ 1.1
CLN6-202ENST00000538696 PTPRCP08575 1304 aa21.92■■□□□ 1.1
CLN6-202ENST00000538696 COL24A1Q17RW2 1714 aa21.91■■□□□ 1.1
CLN6-202ENST00000538696 USPL1Q5W0Q7 1092 aa21.91■■□□□ 1.1
CLN6-202ENST00000538696 PLBD2Q8NHP8 589 aa21.91■■□□□ 1.1
CLN6-202ENST00000538696 FRAT1Q92837 279 aaPredicted RBP21.91■■□□□ 1.1
CLN6-202ENST00000538696 PDGFDQ9GZP0 370 aaPredicted RBP21.91■■□□□ 1.1
CLN6-202ENST00000538696 BCL2L12Q9HB09 334 aa21.91■■□□□ 1.1
CLN6-202ENST00000538696 PPP4R2Q9NY27 417 aa21.91■■□□□ 1.1
CLN6-202ENST00000538696 ANKRD13DQ6ZTN6 518 aa21.9■■□□□ 1.1
CLN6-202ENST00000538696 TNNQ9UQP3 1299 aa21.9■■□□□ 1.1
CLN6-202ENST00000538696 PSDA5PKW4 1024 aaPredicted RBP21.89■■□□□ 1.1
CLN6-202ENST00000538696 ERVV-1B6SEH8 477 aa21.89■■□□□ 1.1
CLN6-202ENST00000538696 MSH5O43196 834 aa21.89■■□□□ 1.1
CLN6-202ENST00000538696 ZPR1O75312 459 aa21.89■■□□□ 1.1
CLN6-202ENST00000538696 DDX58O95786 925 aaKnown RBP21.89■■□□□ 1.1
CLN6-202ENST00000538696 HLFQ16534 295 aa21.89■■□□□ 1.1
CLN6-202ENST00000538696 KSR2Q6VAB6 950 aa21.89■■□□□ 1.1
CLN6-202ENST00000538696 PXDNLA1KZ92 1463 aa21.88■■□□□ 1.09
CLN6-202ENST00000538696 PI4KAP2A4QPH2 592 aa21.88■■□□□ 1.09
CLN6-202ENST00000538696 PI4KAP1Q8N8J0 262 aa21.88■■□□□ 1.09
CLN6-202ENST00000538696 MAP3K2Q9Y2U5 619 aa21.88■■□□□ 1.09
CLN6-202ENST00000538696 F6X3S4 739 aa21.87■■□□□ 1.09
CLN6-202ENST00000538696 GYS1P13807 737 aa21.87■■□□□ 1.09
CLN6-202ENST00000538696 GIGYF2Q6Y7W6 1299 aaKnown RBP21.87■■□□□ 1.09
CLN6-202ENST00000538696 RIC3Q7Z5B4 369 aa21.87■■□□□ 1.09
CLN6-202ENST00000538696 ARHGAP45Q92619 1136 aa21.87■■□□□ 1.09
CLN6-202ENST00000538696 ATP10DQ9P241 1426 aa21.87■■□□□ 1.09
CLN6-202ENST00000538696 RGL2O15211 777 aa21.86■■□□□ 1.09
CLN6-202ENST00000538696 ZKSCAN2Q63HK3 967 aa21.86■■□□□ 1.09
CLN6-202ENST00000538696 PANK1Q8TE04 598 aa21.86■■□□□ 1.09
CLN6-202ENST00000538696 DNAAF4Q8WXU2 420 aa21.86■■□□□ 1.09
CLN6-202ENST00000538696 API5Q9BZZ5 524 aaKnown RBP21.86■■□□□ 1.09
CLN6-202ENST00000538696 TRIM27P14373 513 aa21.85■■□□□ 1.09
CLN6-202ENST00000538696 PDE3AQ14432 1141 aa21.85■■□□□ 1.09
CLN6-202ENST00000538696 ATF7IPQ6VMQ6 1270 aa21.85■■□□□ 1.09
CLN6-202ENST00000538696 IPO8O15397 1037 aaKnown RBP21.84■■□□□ 1.09
CLN6-202ENST00000538696 CLEC4GQ6UXB4 293 aa21.84■■□□□ 1.09
CLN6-202ENST00000538696 METTL22Q9BUU2 404 aaPredicted RBP21.84■■□□□ 1.09
CLN6-202ENST00000538696 ZNF652Q9Y2D9 606 aa21.84■■□□□ 1.09
CLN6-202ENST00000538696 ABCC4O15439 1325 aa21.83■■□□□ 1.09
CLN6-202ENST00000538696 MYD88Q99836 296 aa21.83■■□□□ 1.09
CLN6-202ENST00000538696 RLBP1P12271 317 aa21.82■■□□□ 1.08
CLN6-202ENST00000538696 TCIRG1Q13488 830 aa21.82■■□□□ 1.08
CLN6-202ENST00000538696 HSP90AB3PQ58FF7 597 aa21.82■■□□□ 1.08
CLN6-202ENST00000538696 TBC1D9BQ66K14 1250 aa21.82■■□□□ 1.08
CLN6-202ENST00000538696 MSL1Q68DK7 614 aa21.82■■□□□ 1.08
CLN6-202ENST00000538696 B4GALNT3Q6L9W6 998 aa21.82■■□□□ 1.08
CLN6-202ENST00000538696 NRXN2Q9P2S2 1712 aa21.82■■□□□ 1.08
CLN6-202ENST00000538696 SLC16A10Q8TF71 515 aa21.81■■□□□ 1.08
CLN6-202ENST00000538696 ISCA1Q9BUE6 129 aa21.81■■□□□ 1.08
CLN6-202ENST00000538696 UBN2Q6ZU65 1347 aa21.81■■□□□ 1.08
CLN6-202ENST00000538696 GPTP24298 496 aa21.8■■□□□ 1.08
CLN6-202ENST00000538696 SLC4A10Q6U841 1118 aa21.8■■□□□ 1.08
CLN6-202ENST00000538696 ZNF34Q8IZ26 560 aa21.8■■□□□ 1.08
CLN6-202ENST00000538696 CLUAP1Q96AJ1 413 aa21.8■■□□□ 1.08
CLN6-202ENST00000538696 ATP5J2-PTCD1G3V325 749 aa21.8■■□□□ 1.08
CLN6-202ENST00000538696 IGKV5-2P06315 115 aa21.8■■□□□ 1.08
CLN6-202ENST00000538696 NFIXQ14938 502 aa21.8■■□□□ 1.08
CLN6-202ENST00000538696 BEND3Q5T5X7 828 aa21.8■■□□□ 1.08
CLN6-202ENST00000538696 NIP7Q9Y221 180 aaKnown RBP eCLIP21.8■■□□□ 1.08
CLN6-202ENST00000538696 COG6Q9Y2V7 657 aa21.8■■□□□ 1.08
CLN6-202ENST00000538696 ZBTB7AO95365 584 aa21.79■■□□□ 1.08
CLN6-202ENST00000538696 NEXNQ0ZGT2 675 aa21.79■■□□□ 1.08
CLN6-202ENST00000538696 BICDL1Q6ZP65 573 aa21.79■■□□□ 1.08
CLN6-202ENST00000538696 DZIP1LQ8IYY4 767 aaKnown RBP21.79■■□□□ 1.08
CLN6-202ENST00000538696 NLGN1Q8N2Q7 840 aa21.79■■□□□ 1.08
CLN6-202ENST00000538696 LAMB2P55268 1798 aa21.78■■□□□ 1.08
CLN6-202ENST00000538696 TM4SF1P30408 202 aa21.78■■□□□ 1.08
CLN6-202ENST00000538696 CWF19L2Q2TBE0 894 aaKnown RBP21.78■■□□□ 1.08
CLN6-202ENST00000538696 LINS1Q8NG48 757 aa21.78■■□□□ 1.08
CLN6-202ENST00000538696 NEURL1BA8MQ27 555 aa21.77■■□□□ 1.07
CLN6-202ENST00000538696 DDR1Q08345 913 aa21.77■■□□□ 1.07
CLN6-202ENST00000538696 NLRP10Q86W26 655 aa21.77■■□□□ 1.07
CLN6-202ENST00000538696 FTSJ3Q8IY81 847 aaKnown RBP21.77■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms