RNA–Protein interactions for RNA: ENST00000538573.1

LINC02408-202, Transcript of long intergenic non-protein coding RNA 2408, humanhuman

TSL 4 BASIC

Gene LINC02408, Length 559 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02408-202ENST00000538573 FAM208AQ9UK61 1670 aaKnown RBP6.8□□□□□ -1.32
LINC02408-202ENST00000538573 COL5A2P05997 1499 aaPredicted RBP6.79□□□□□ -1.32
LINC02408-202ENST00000538573 C3orf80F5H4A9 247 aa6.79□□□□□ -1.32
LINC02408-202ENST00000538573 NFE2L2Q16236 605 aa6.79□□□□□ -1.32
LINC02408-202ENST00000538573 SWT1Q5T5J6 900 aaKnown RBP6.79□□□□□ -1.32
LINC02408-202ENST00000538573 NGEFQ8N5V2 710 aa6.79□□□□□ -1.32
LINC02408-202ENST00000538573 FBXO41Q8TF61 875 aa6.79□□□□□ -1.32
LINC02408-202ENST00000538573 RAPGEF4Q8WZA2 1011 aa6.79□□□□□ -1.32
LINC02408-202ENST00000538573 USP35Q9P2H5 1018 aa6.79□□□□□ -1.32
LINC02408-202ENST00000538573 PLCH1Q4KWH8 1693 aa6.79□□□□□ -1.32
LINC02408-202ENST00000538573 KDRP35968 1356 aa6.79□□□□□ -1.32
LINC02408-202ENST00000538573 DLG5Q8TDM6 1919 aa6.78□□□□□ -1.32
LINC02408-202ENST00000538573 TATP17735 454 aaPredicted RBP6.78□□□□□ -1.32
LINC02408-202ENST00000538573 GGCXP38435 758 aa6.78□□□□□ -1.32
LINC02408-202ENST00000538573 MTHFSDQ2M296 383 aaKnown RBP6.78□□□□□ -1.32
LINC02408-202ENST00000538573 PLEKHO1Q53GL0 409 aaPredicted RBP6.78□□□□□ -1.32
LINC02408-202ENST00000538573 ZNF787Q6DD87 383 aa6.78□□□□□ -1.32
LINC02408-202ENST00000538573 WWC1Q8IX03 1113 aa6.78□□□□□ -1.32
LINC02408-202ENST00000538573 HOMEZQ8IX15 550 aa6.78□□□□□ -1.32
LINC02408-202ENST00000538573 GAS2L2Q8NHY3 880 aa6.78□□□□□ -1.32
LINC02408-202ENST00000538573 ARHGEF1Q92888 912 aaKnown RBP6.78□□□□□ -1.32
LINC02408-202ENST00000538573 CARD10Q9BWT7 1032 aa6.78□□□□□ -1.32
LINC02408-202ENST00000538573 PRKD2Q9BZL6 878 aa6.78□□□□□ -1.32
LINC02408-202ENST00000538573 CCDC9Q9Y3X0 531 aaKnown RBP6.78□□□□□ -1.32
LINC02408-202ENST00000538573 CRB1P82279 1406 aa6.77□□□□□ -1.33
LINC02408-202ENST00000538573 LRP6O75581 1613 aa6.77□□□□□ -1.33
LINC02408-202ENST00000538573 LMOD3Q0VAK6 560 aa6.77□□□□□ -1.33
LINC02408-202ENST00000538573 PDE3BQ13370 1112 aa6.77□□□□□ -1.33
LINC02408-202ENST00000538573 CCDC27Q2M243 656 aa6.77□□□□□ -1.33
LINC02408-202ENST00000538573 AMOTQ4VCS5 1084 aa6.77□□□□□ -1.33
LINC02408-202ENST00000538573 PPP1R18Q6NYC8 613 aa6.77□□□□□ -1.33
LINC02408-202ENST00000538573 UNC5CLQ8IV45 518 aa6.77□□□□□ -1.33
LINC02408-202ENST00000538573 RTF1Q92541 710 aaKnown RBP6.77□□□□□ -1.33
LINC02408-202ENST00000538573 NPDC1Q9NQX5 325 aaPredicted RBP6.77□□□□□ -1.33
LINC02408-202ENST00000538573 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.77□□□□□ -1.33
LINC02408-202ENST00000538573 TSHZ2Q9NRE2 1034 aa6.77□□□□□ -1.33
LINC02408-202ENST00000538573 NCAPD2Q15021 1401 aa6.76□□□□□ -1.33
LINC02408-202ENST00000538573 NWD2Q9ULI1 1742 aa6.76□□□□□ -1.33
LINC02408-202ENST00000538573 GNAT3A8MTJ3 354 aa6.76□□□□□ -1.33
LINC02408-202ENST00000538573 IL2RBP14784 551 aa6.76□□□□□ -1.33
LINC02408-202ENST00000538573 APLP1P51693 650 aa6.76□□□□□ -1.33
LINC02408-202ENST00000538573 COPS2P61201 443 aa6.76□□□□□ -1.33
LINC02408-202ENST00000538573 DCTN1Q14203 1278 aa6.76□□□□□ -1.33
LINC02408-202ENST00000538573 C1orf141Q5JVX7 400 aa6.76□□□□□ -1.33
LINC02408-202ENST00000538573 ZNF530Q6P9A1 599 aaPredicted RBP6.76□□□□□ -1.33
LINC02408-202ENST00000538573 WDR63Q8IWG1 891 aa6.76□□□□□ -1.33
LINC02408-202ENST00000538573 ZNF516Q92618 1163 aa6.76□□□□□ -1.33
LINC02408-202ENST00000538573 THUMPD2Q9BTF0 503 aaKnown RBP6.76□□□□□ -1.33
LINC02408-202ENST00000538573 PRR14Q9BWN1 585 aa6.76□□□□□ -1.33
LINC02408-202ENST00000538573 USP21Q9UK80 565 aa6.76□□□□□ -1.33
LINC02408-202ENST00000538573 SPG7Q9UQ90 795 aa6.76□□□□□ -1.33
LINC02408-202ENST00000538573 LAS1LQ9Y4W2 734 aaKnown RBP6.76□□□□□ -1.33
LINC02408-202ENST00000538573 NRAPQ86VF7 1730 aa6.76□□□□□ -1.33
LINC02408-202ENST00000538573 SLIT2O94813 1529 aa6.76□□□□□ -1.33
LINC02408-202ENST00000538573 ZNF521Q96K83 1311 aa6.76□□□□□ -1.33
LINC02408-202ENST00000538573 NRG2O14511 850 aaPredicted RBP6.75□□□□□ -1.33
LINC02408-202ENST00000538573 CALD1Q05682 793 aaKnown RBP6.75□□□□□ -1.33
LINC02408-202ENST00000538573 MCM10Q7L590 875 aa6.75□□□□□ -1.33
LINC02408-202ENST00000538573 FNBP4Q8N3X1 1017 aaPredicted RBP6.75□□□□□ -1.33
LINC02408-202ENST00000538573 TTC13Q8NBP0 860 aa6.75□□□□□ -1.33
LINC02408-202ENST00000538573 ZCRB1Q8TBF4 217 aaKnown RBP6.75□□□□□ -1.33
LINC02408-202ENST00000538573 MEGF6O75095 1541 aa6.75□□□□□ -1.33
LINC02408-202ENST00000538573 AFF2P51816 1311 aa6.75□□□□□ -1.33
LINC02408-202ENST00000538573 SPATA31A1Q5TZJ5 1347 aa6.75□□□□□ -1.33
LINC02408-202ENST00000538573 BCL9LQ86UU0 1499 aa6.74□□□□□ -1.33
LINC02408-202ENST00000538573 MAP3K5Q99683 1374 aa6.74□□□□□ -1.33
LINC02408-202ENST00000538573 PARP4Q9UKK3 1724 aaKnown RBP6.74□□□□□ -1.33
LINC02408-202ENST00000538573 E9PSI1 815 aa6.74□□□□□ -1.33
LINC02408-202ENST00000538573 HTATSF1O43719 755 aaKnown RBP6.74□□□□□ -1.33
LINC02408-202ENST00000538573 MLLT3P42568 568 aaPredicted RBP6.74□□□□□ -1.33
LINC02408-202ENST00000538573 SLFN5Q08AF3 891 aa6.74□□□□□ -1.33
LINC02408-202ENST00000538573 VPS72Q15906 364 aa6.74□□□□□ -1.33
LINC02408-202ENST00000538573 AKAP4Q5JQC9 854 aa6.74□□□□□ -1.33
LINC02408-202ENST00000538573 MPRIPQ6WCQ1 1025 aa6.74□□□□□ -1.33
LINC02408-202ENST00000538573 IFNL2Q8IZJ0 200 aa6.74□□□□□ -1.33
LINC02408-202ENST00000538573 RBM46Q8TBY0 533 aaKnown RBP6.74□□□□□ -1.33
LINC02408-202ENST00000538573 DDX54Q8TDD1 881 aaKnown RBP6.74□□□□□ -1.33
LINC02408-202ENST00000538573 THRAP3Q9Y2W1 955 aaKnown RBP6.74□□□□□ -1.33
LINC02408-202ENST00000538573 SPATA31A5Q5VU36 1347 aa6.74□□□□□ -1.33
LINC02408-202ENST00000538573 SPATA31A7Q8IWB4 1347 aa6.74□□□□□ -1.33
LINC02408-202ENST00000538573 EXOC5O00471 708 aa6.73□□□□□ -1.33
LINC02408-202ENST00000538573 PHKG2P15735 406 aa6.73□□□□□ -1.33
LINC02408-202ENST00000538573 GNAI1P63096 354 aa6.73□□□□□ -1.33
LINC02408-202ENST00000538573 IL17REQ8NFR9 667 aa6.73□□□□□ -1.33
LINC02408-202ENST00000538573 CDCA7Q9BWT1 371 aaPredicted RBP6.73□□□□□ -1.33
LINC02408-202ENST00000538573 MYH16Q9H6N6 1097 aa6.73□□□□□ -1.33
LINC02408-202ENST00000538573 LGR6Q9HBX8 967 aa6.73□□□□□ -1.33
LINC02408-202ENST00000538573 PCDHB3Q9Y5E6 796 aa6.73□□□□□ -1.33
LINC02408-202ENST00000538573 OVOS2A0A0G2JMS6 1433 aa6.73□□□□□ -1.33
LINC02408-202ENST00000538573 VIRMAQ69YN4 1812 aaKnown RBP6.73□□□□□ -1.33
LINC02408-202ENST00000538573 IL16Q14005 1332 aa6.73□□□□□ -1.33
LINC02408-202ENST00000538573 PCDH11XQ9BZA7 1347 aa6.73□□□□□ -1.33
LINC02408-202ENST00000538573 PCDH11YQ9BZA8 1340 aa6.73□□□□□ -1.33
LINC02408-202ENST00000538573 CYP27B1O15528 508 aa6.72□□□□□ -1.33
LINC02408-202ENST00000538573 RNMTO43148 476 aaKnown RBP6.72□□□□□ -1.33
LINC02408-202ENST00000538573 DNAJB2P25686 324 aa6.72□□□□□ -1.33
LINC02408-202ENST00000538573 TEFQ10587 303 aa6.72□□□□□ -1.33
LINC02408-202ENST00000538573 DDB1Q16531 1140 aa6.72□□□□□ -1.33
LINC02408-202ENST00000538573 DUSP27Q5VZP5 1158 aa6.72□□□□□ -1.33
LINC02408-202ENST00000538573 BARGINQ6ZT62 677 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms