RNA–Protein interactions for RNA: ENST00000538454.2

MDM1-208, Transcript of Mdm1 nuclear protein, humanhuman

TSL 3

Gene MDM1, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-208ENST00000538454 RASA1P20936 1047 aa9.92□□□□□ -0.82
MDM1-208ENST00000538454 CALR3Q96L12 384 aaKnown RBP9.92□□□□□ -0.82
MDM1-208ENST00000538454 PRR12Q9ULL5 1215 aa9.92□□□□□ -0.82
MDM1-208ENST00000538454 A6NJR5 290 aa9.91□□□□□ -0.82
MDM1-208ENST00000538454 LAMC2Q13753 1193 aa9.91□□□□□ -0.82
MDM1-208ENST00000538454 PLA2G4EQ3MJ16 856 aa9.91□□□□□ -0.82
MDM1-208ENST00000538454 BTBD6Q96KE9 485 aa9.91□□□□□ -0.82
MDM1-208ENST00000538454 AVENQ9NQS1 362 aaPredicted RBP9.91□□□□□ -0.82
MDM1-208ENST00000538454 KLF15Q9UIH9 416 aa9.91□□□□□ -0.82
MDM1-208ENST00000538454 GPC6Q9Y625 555 aaPredicted RBP9.91□□□□□ -0.82
MDM1-208ENST00000538454 DKK1O94907 266 aa9.9□□□□□ -0.82
MDM1-208ENST00000538454 PCBP4P57723 403 aaKnown RBP9.9□□□□□ -0.82
MDM1-208ENST00000538454 ZNF468Q5VIY5 522 aaPredicted RBP9.9□□□□□ -0.82
MDM1-208ENST00000538454 FCHSD1Q86WN1 690 aa9.9□□□□□ -0.82
MDM1-208ENST00000538454 HCN4Q9Y3Q4 1203 aa9.9□□□□□ -0.82
MDM1-208ENST00000538454 PPP1R12BO60237 982 aaPredicted RBP9.89□□□□□ -0.83
MDM1-208ENST00000538454 HOXB4P17483 251 aaPredicted RBP9.89□□□□□ -0.83
MDM1-208ENST00000538454 C7orf43Q8WVR3 580 aa9.89□□□□□ -0.83
MDM1-208ENST00000538454 PHACTR1Q9C0D0 580 aa9.89□□□□□ -0.83
MDM1-208ENST00000538454 HIRAP54198 1017 aaPredicted RBP9.88□□□□□ -0.83
MDM1-208ENST00000538454 LARP1Q6PKG0 1096 aaKnown RBP9.88□□□□□ -0.83
MDM1-208ENST00000538454 CHSY3Q70JA7 882 aa9.88□□□□□ -0.83
MDM1-208ENST00000538454 HSH2DQ96JZ2 352 aa9.88□□□□□ -0.83
MDM1-208ENST00000538454 PPP1R12CQ9BZL4 782 aa9.88□□□□□ -0.83
MDM1-208ENST00000538454 SEC13P55735 322 aa9.87□□□□□ -0.83
MDM1-208ENST00000538454 GRIN2CQ14957 1233 aa9.87□□□□□ -0.83
MDM1-208ENST00000538454 C1orf53Q5VUE5 145 aa9.87□□□□□ -0.83
MDM1-208ENST00000538454 LINC00114Q6XXX2 140 aa9.87□□□□□ -0.83
MDM1-208ENST00000538454 MSTNO14793 375 aa9.86□□□□□ -0.83
MDM1-208ENST00000538454 C21orf2O43822 256 aa9.86□□□□□ -0.83
MDM1-208ENST00000538454 ITGB2P05107 769 aa9.86□□□□□ -0.83
MDM1-208ENST00000538454 COL8A1P27658 744 aa9.86□□□□□ -0.83
MDM1-208ENST00000538454 DGKGP49619 791 aa9.86□□□□□ -0.83
MDM1-208ENST00000538454 SUZ12Q15022 739 aaKnown RBP9.86□□□□□ -0.83
MDM1-208ENST00000538454 POTEAQ6S8J7 498 aa9.86□□□□□ -0.83
MDM1-208ENST00000538454 SCG3Q8WXD2 468 aaKnown RBP9.86□□□□□ -0.83
MDM1-208ENST00000538454 SUV39H2Q9H5I1 410 aa9.86□□□□□ -0.83
MDM1-208ENST00000538454 PIK3R2O00459 728 aa9.85□□□□□ -0.83
MDM1-208ENST00000538454 GNB5O14775 395 aa9.85□□□□□ -0.83
MDM1-208ENST00000538454 SFSWAPQ12872 951 aaKnown RBP9.85□□□□□ -0.83
MDM1-208ENST00000538454 CRTC2Q53ET0 693 aaPredicted RBP9.85□□□□□ -0.83
MDM1-208ENST00000538454 SYT9Q86SS6 491 aa9.85□□□□□ -0.83
MDM1-208ENST00000538454 ATAD2Q6PL18 1390 aa9.85□□□□□ -0.83
MDM1-208ENST00000538454 CHMP7Q8WUX9 453 aaPredicted RBP9.84□□□□□ -0.83
MDM1-208ENST00000538454 CEP63Q96MT8 703 aa9.84□□□□□ -0.83
MDM1-208ENST00000538454 SPOCK3Q9BQ16 436 aa9.84□□□□□ -0.83
MDM1-208ENST00000538454 ANKIB1Q9P2G1 1089 aa9.84□□□□□ -0.83
MDM1-208ENST00000538454 KRBA1A5PL33 1030 aa9.83□□□□□ -0.84
MDM1-208ENST00000538454 USP17L15C9J2P7 530 aa9.83□□□□□ -0.84
MDM1-208ENST00000538454 USP17L10C9JJH3 530 aa9.83□□□□□ -0.84
MDM1-208ENST00000538454 USP17L13C9JLJ4 530 aa9.83□□□□□ -0.84
MDM1-208ENST00000538454 USP17L12C9JPN9 530 aa9.83□□□□□ -0.84
MDM1-208ENST00000538454 USP17L11C9JVI0 530 aa9.83□□□□□ -0.84
MDM1-208ENST00000538454 USP17L21D6R901 530 aa9.83□□□□□ -0.84
MDM1-208ENST00000538454 USP17L18D6R9N7 530 aa9.83□□□□□ -0.84
MDM1-208ENST00000538454 USP17L22D6RA61 530 aa9.83□□□□□ -0.84
MDM1-208ENST00000538454 USP17L17D6RBQ6 530 aa9.83□□□□□ -0.84
MDM1-208ENST00000538454 USP17L19D6RCP7 530 aa9.83□□□□□ -0.84
MDM1-208ENST00000538454 USP17L20D6RJB6 530 aa9.83□□□□□ -0.84
MDM1-208ENST00000538454 LMOD1P29536 600 aaPredicted RBP9.83□□□□□ -0.84
MDM1-208ENST00000538454 USP17L24Q0WX57 530 aa9.83□□□□□ -0.84
MDM1-208ENST00000538454 DPYDQ12882 1025 aa9.83□□□□□ -0.84
MDM1-208ENST00000538454 PTK7Q13308 1070 aa9.83□□□□□ -0.84
MDM1-208ENST00000538454 KANK4Q5T7N3 995 aaPredicted RBP9.83□□□□□ -0.84
MDM1-208ENST00000538454 ALYREFQ86V81 257 aaKnown RBP9.83□□□□□ -0.84
MDM1-208ENST00000538454 ALDH16A1Q8IZ83 802 aa9.83□□□□□ -0.84
MDM1-208ENST00000538454 NGLY1Q96IV0 654 aa9.83□□□□□ -0.84
MDM1-208ENST00000538454 HINFPQ9BQA5 517 aa9.83□□□□□ -0.84
MDM1-208ENST00000538454 BRD7Q9NPI1 651 aa9.83□□□□□ -0.84
MDM1-208ENST00000538454 LGR5O75473 907 aa9.82□□□□□ -0.84
MDM1-208ENST00000538454 ZNF280CQ8ND82 737 aa9.82□□□□□ -0.84
MDM1-208ENST00000538454 GAS2L2Q8NHY3 880 aa9.82□□□□□ -0.84
MDM1-208ENST00000538454 SUSD3Q96L08 255 aa9.82□□□□□ -0.84
MDM1-208ENST00000538454 SLC30A3Q99726 388 aa9.82□□□□□ -0.84
MDM1-208ENST00000538454 C2orf49Q9BVC5 232 aaPredicted RBP9.82□□□□□ -0.84
MDM1-208ENST00000538454 ELOA3CA0A087WX78 387 aaPredicted RBP9.81□□□□□ -0.84
MDM1-208ENST00000538454 ELOA3DA6NLF2 546 aaPredicted RBP9.81□□□□□ -0.84
MDM1-208ENST00000538454 FAM196BA6NMK8 535 aa9.81□□□□□ -0.84
MDM1-208ENST00000538454 ELOA3BQ3SY89 546 aa9.81□□□□□ -0.84
MDM1-208ENST00000538454 STAG2Q8N3U4 1231 aa9.81□□□□□ -0.84
MDM1-208ENST00000538454 ELOA3Q8NG57 546 aa9.81□□□□□ -0.84
MDM1-208ENST00000538454 VRTNQ9H8Y1 702 aa9.81□□□□□ -0.84
MDM1-208ENST00000538454 NOP53Q9NZM5 478 aaKnown RBP9.81□□□□□ -0.84
MDM1-208ENST00000538454 PROCP04070 461 aa9.8□□□□□ -0.84
MDM1-208ENST00000538454 TYRO3Q06418 890 aa9.8□□□□□ -0.84
MDM1-208ENST00000538454 SPEM2Q0P670 501 aa9.8□□□□□ -0.84
MDM1-208ENST00000538454 RAB44Q7Z6P3 723 aaPredicted RBP9.8□□□□□ -0.84
MDM1-208ENST00000538454 ANKMY2Q8IV38 441 aa9.8□□□□□ -0.84
MDM1-208ENST00000538454 SIN3BO75182 1162 aa9.79□□□□□ -0.84
MDM1-208ENST00000538454 ALAS2P22557 587 aa9.79□□□□□ -0.84
MDM1-208ENST00000538454 ZNF777Q9ULD5 760 aaPredicted RBP9.79□□□□□ -0.84
MDM1-208ENST00000538454 NEUROD1Q13562 356 aa9.78□□□□□ -0.84
MDM1-208ENST00000538454 KCNH4Q9UQ05 1017 aa9.78□□□□□ -0.84
MDM1-208ENST00000538454 KCNQ4P56696 695 aa9.77□□□□□ -0.85
MDM1-208ENST00000538454 HIF1AQ16665 826 aa9.77□□□□□ -0.85
MDM1-208ENST00000538454 MDFIQ99750 246 aa9.77□□□□□ -0.85
MDM1-208ENST00000538454 ADARB2-AS1A8MUL3 147 aa9.76□□□□□ -0.85
MDM1-208ENST00000538454 IGFBP4P22692 258 aa9.76□□□□□ -0.85
MDM1-208ENST00000538454 CFAP70Q5T0N1 1121 aa9.76□□□□□ -0.85
MDM1-208ENST00000538454 BTLAQ7Z6A9 289 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms