RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 PRDM11Q9NQV5 511 aa13.92□□□□□ -0.18
SLC28A1-204ENST00000538177 STRCQ7RTU9 1775 aa13.92□□□□□ -0.18
SLC28A1-204ENST00000538177 GLRX3O76003 335 aaKnown RBP13.92□□□□□ -0.18
SLC28A1-204ENST00000538177 BICC1Q9H694 974 aaKnown RBP13.92□□□□□ -0.18
SLC28A1-204ENST00000538177 CWC22Q9HCG8 908 aaKnown RBP13.92□□□□□ -0.18
SLC28A1-204ENST00000538177 ANO2Q9NQ90 1003 aa13.92□□□□□ -0.18
SLC28A1-204ENST00000538177 GCKRQ14397 625 aa13.91□□□□□ -0.18
SLC28A1-204ENST00000538177 ANKRD13DQ6ZTN6 518 aa13.91□□□□□ -0.18
SLC28A1-204ENST00000538177 CNTROBQ8N137 903 aa13.91□□□□□ -0.18
SLC28A1-204ENST00000538177 PA2G4Q9UQ80 394 aaKnown RBP13.91□□□□□ -0.18
SLC28A1-204ENST00000538177 MCM2P49736 904 aa13.9□□□□□ -0.18
SLC28A1-204ENST00000538177 IL27Q8NEV9 243 aa13.9□□□□□ -0.18
SLC28A1-204ENST00000538177 ZCRB1Q8TBF4 217 aaKnown RBP13.9□□□□□ -0.18
SLC28A1-204ENST00000538177 PARP4Q9UKK3 1724 aaKnown RBP13.9□□□□□ -0.18
SLC28A1-204ENST00000538177 SGSM2O43147 1006 aa13.9□□□□□ -0.18
SLC28A1-204ENST00000538177 PTMSP20962 102 aa13.9□□□□□ -0.18
SLC28A1-204ENST00000538177 NUCB2P80303 420 aa13.9□□□□□ -0.18
SLC28A1-204ENST00000538177 IL25Q9H293 177 aa13.9□□□□□ -0.18
SLC28A1-204ENST00000538177 PALD1Q9ULE6 856 aa13.9□□□□□ -0.18
SLC28A1-204ENST00000538177 PCDH11XQ9BZA7 1347 aa13.89□□□□□ -0.19
SLC28A1-204ENST00000538177 PCDH11YQ9BZA8 1340 aa13.89□□□□□ -0.19
SLC28A1-204ENST00000538177 ZNF335Q9H4Z2 1342 aaPredicted RBP13.89□□□□□ -0.19
SLC28A1-204ENST00000538177 MAP4K4O95819 1239 aaPredicted RBP13.89□□□□□ -0.19
SLC28A1-204ENST00000538177 SSFA2P28290 1259 aa13.89□□□□□ -0.19
SLC28A1-204ENST00000538177 NEK4P51957 841 aa13.89□□□□□ -0.19
SLC28A1-204ENST00000538177 TOM1L2Q6ZVM7 507 aa13.89□□□□□ -0.19
SLC28A1-204ENST00000538177 MYD88Q99836 296 aa13.89□□□□□ -0.19
SLC28A1-204ENST00000538177 ECHDC1Q9NTX5 307 aa13.89□□□□□ -0.19
SLC28A1-204ENST00000538177 ERVV-2B6SEH9 535 aa13.89□□□□□ -0.19
SLC28A1-204ENST00000538177 SASH1O94885 1247 aa13.89□□□□□ -0.19
SLC28A1-204ENST00000538177 CYP2E1P05181 493 aaPredicted RBP13.89□□□□□ -0.19
SLC28A1-204ENST00000538177 G3BP1Q13283 466 aaKnown RBP eCLIP13.89□□□□□ -0.19
SLC28A1-204ENST00000538177 NKX1-1Q15270 411 aaPredicted RBP13.89□□□□□ -0.19
SLC28A1-204ENST00000538177 CARD10Q9BWT7 1032 aa13.89□□□□□ -0.19
SLC28A1-204ENST00000538177 COL5A2P05997 1499 aaPredicted RBP13.88□□□□□ -0.19
SLC28A1-204ENST00000538177 ERBB4Q15303 1308 aa13.88□□□□□ -0.19
SLC28A1-204ENST00000538177 IFIT2P09913 472 aaKnown RBP13.88□□□□□ -0.19
SLC28A1-204ENST00000538177 HSPA4P34932 840 aa13.88□□□□□ -0.19
SLC28A1-204ENST00000538177 GPATCH3Q96I76 525 aa13.88□□□□□ -0.19
SLC28A1-204ENST00000538177 COL15A1P39059 1388 aa13.88□□□□□ -0.19
SLC28A1-204ENST00000538177 GLI3P10071 1580 aa13.88□□□□□ -0.19
SLC28A1-204ENST00000538177 KDM4FA0A1W2PPD8 638 aa13.88□□□□□ -0.19
SLC28A1-204ENST00000538177 AK9Q5TCS8 1911 aa13.87□□□□□ -0.19
SLC28A1-204ENST00000538177 SKOR2Q2VWA4 1001 aaPredicted RBP13.87□□□□□ -0.19
SLC28A1-204ENST00000538177 AACSQ86V21 672 aa13.87□□□□□ -0.19
SLC28A1-204ENST00000538177 RAD50Q92878 1312 aa13.87□□□□□ -0.19
SLC28A1-204ENST00000538177 FSD2A1L4K1 749 aa13.86□□□□□ -0.19
SLC28A1-204ENST00000538177 CUL4AQ13619 759 aa13.86□□□□□ -0.19
SLC28A1-204ENST00000538177 EPHA10Q5JZY3 1008 aa13.86□□□□□ -0.19
SLC28A1-204ENST00000538177 L1TD1Q5T7N2 865 aaKnown RBP13.86□□□□□ -0.19
SLC28A1-204ENST00000538177 PLBD2Q8NHP8 589 aa13.86□□□□□ -0.19
SLC28A1-204ENST00000538177 TMX3Q96JJ7 454 aa13.86□□□□□ -0.19
SLC28A1-204ENST00000538177 LSG1Q9H089 658 aaKnown RBP13.86□□□□□ -0.19
SLC28A1-204ENST00000538177 IL2RBP14784 551 aa13.86□□□□□ -0.19
SLC28A1-204ENST00000538177 PIP4K2AP48426 406 aaPredicted RBP13.86□□□□□ -0.19
SLC28A1-204ENST00000538177 ZGPATQ8N5A5 531 aaKnown RBP13.86□□□□□ -0.19
SLC28A1-204ENST00000538177 EAF2Q96CJ1 260 aaPredicted RBP13.86□□□□□ -0.19
SLC28A1-204ENST00000538177 BAG4O95429 457 aaKnown RBP13.85□□□□□ -0.19
SLC28A1-204ENST00000538177 RABL6Q3YEC7 729 aaPredicted RBP13.85□□□□□ -0.19
SLC28A1-204ENST00000538177 RUFY2Q8WXA3 655 aa13.85□□□□□ -0.19
SLC28A1-204ENST00000538177 EVI5LQ96CN4 794 aa13.85□□□□□ -0.19
SLC28A1-204ENST00000538177 GZF1Q9H116 711 aaPredicted RBP13.85□□□□□ -0.19
SLC28A1-204ENST00000538177 COPRSQ9NQ92 184 aa13.85□□□□□ -0.19
SLC28A1-204ENST00000538177 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.85□□□□□ -0.19
SLC28A1-204ENST00000538177 LAMB4A4D0S4 1761 aa13.85□□□□□ -0.19
SLC28A1-204ENST00000538177 NBPF26B4DH59 902 aa13.84□□□□□ -0.19
SLC28A1-204ENST00000538177 GOLGA6L22H0YM25 854 aa13.84□□□□□ -0.19
SLC28A1-204ENST00000538177 RFX5P48382 616 aaPredicted RBP13.84□□□□□ -0.19
SLC28A1-204ENST00000538177 NBPF14Q5TI25 921 aa13.84□□□□□ -0.19
SLC28A1-204ENST00000538177 NBPF10Q6P3W6 841 aaKnown RBP13.84□□□□□ -0.19
SLC28A1-204ENST00000538177 NBPF15Q8N660 670 aa13.84□□□□□ -0.19
SLC28A1-204ENST00000538177 BRPF3Q9ULD4 1205 aa13.84□□□□□ -0.19
SLC28A1-204ENST00000538177 CASP7P55210 303 aa13.83□□□□□ -0.19
SLC28A1-204ENST00000538177 CWC27Q6UX04 472 aaKnown RBP13.83□□□□□ -0.19
SLC28A1-204ENST00000538177 KIAA1211Q6ZU35 1233 aa13.83□□□□□ -0.19
SLC28A1-204ENST00000538177 INTS4Q96HW7 963 aaKnown RBP13.83□□□□□ -0.19
SLC28A1-204ENST00000538177 DIAPH3Q9NSV4 1193 aa13.83□□□□□ -0.19
SLC28A1-204ENST00000538177 ABCA3Q99758 1704 aa13.83□□□□□ -0.2
SLC28A1-204ENST00000538177 GOLGA6L3A6NEY3 463 aa13.83□□□□□ -0.2
SLC28A1-204ENST00000538177 PKP1Q13835 747 aa13.82□□□□□ -0.2
SLC28A1-204ENST00000538177 UBE3BQ7Z3V4 1068 aa13.82□□□□□ -0.2
SLC28A1-204ENST00000538177 CCDC8Q9H0W5 538 aaPredicted RBP13.82□□□□□ -0.2
SLC28A1-204ENST00000538177 SIL1Q9H173 461 aa13.82□□□□□ -0.2
SLC28A1-204ENST00000538177 ZDHHC9Q9Y397 364 aa13.82□□□□□ -0.2
SLC28A1-204ENST00000538177 SNX14Q9Y5W7 946 aa13.82□□□□□ -0.2
SLC28A1-204ENST00000538177 UBR2Q8IWV8 1755 aa13.82□□□□□ -0.2
SLC28A1-204ENST00000538177 A0A087WZG4 1122 aa13.82□□□□□ -0.2
SLC28A1-204ENST00000538177 ATP5J2-PTCD1G3V325 749 aa13.82□□□□□ -0.2
SLC28A1-204ENST00000538177 PTCD1O75127 700 aaKnown RBP13.82□□□□□ -0.2
SLC28A1-204ENST00000538177 PTPN12Q05209 780 aaKnown RBP13.82□□□□□ -0.2
SLC28A1-204ENST00000538177 KLHDC4Q8TBB5 520 aa13.82□□□□□ -0.2
SLC28A1-204ENST00000538177 UPF3BQ9BZI7 483 aaKnown RBP13.82□□□□□ -0.2
SLC28A1-204ENST00000538177 ISY1Q9ULR0 285 aaKnown RBP13.82□□□□□ -0.2
SLC28A1-204ENST00000538177 KCPQ6ZWJ8 1503 aa13.82□□□□□ -0.2
SLC28A1-204ENST00000538177 ARFGEF2Q9Y6D5 1785 aa13.82□□□□□ -0.2
SLC28A1-204ENST00000538177 H7C1W4 665 aa13.81□□□□□ -0.2
SLC28A1-204ENST00000538177 HIP1O00291 1037 aa13.81□□□□□ -0.2
SLC28A1-204ENST00000538177 EVA1CP58658 441 aa13.81□□□□□ -0.2
SLC28A1-204ENST00000538177 DDX54Q8TDD1 881 aaKnown RBP13.81□□□□□ -0.2
SLC28A1-204ENST00000538177 TLR7Q9NYK1 1049 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms