RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 NECTIN2Q92692 538 aa11□□□□□ -0.65
SPARC-208ENST00000538026 PRR5LQ6MZQ0 368 aa10.99□□□□□ -0.65
SPARC-208ENST00000538026 CLEC4GQ6UXB4 293 aa10.99□□□□□ -0.65
SPARC-208ENST00000538026 SPINK5Q9NQ38 1064 aaPredicted RBP10.99□□□□□ -0.65
SPARC-208ENST00000538026 IFT57Q9NWB7 429 aa10.99□□□□□ -0.65
SPARC-208ENST00000538026 DUSP27Q5VZP5 1158 aa10.98□□□□□ -0.65
SPARC-208ENST00000538026 FAM9BQ8IZU0 186 aa10.98□□□□□ -0.65
SPARC-208ENST00000538026 TSPYL6Q8N831 410 aa10.98□□□□□ -0.65
SPARC-208ENST00000538026 MAP3K15Q6ZN16 1313 aa10.98□□□□□ -0.65
SPARC-208ENST00000538026 COL11A2P13942 1736 aaPredicted RBP10.98□□□□□ -0.65
SPARC-208ENST00000538026 DLEC1Q9Y238 1755 aa10.98□□□□□ -0.65
SPARC-208ENST00000538026 ARFGEF1Q9Y6D6 1849 aa10.98□□□□□ -0.65
SPARC-208ENST00000538026 ERVV-1B6SEH8 477 aa10.97□□□□□ -0.65
SPARC-208ENST00000538026 ELL2O00472 640 aaPredicted RBP10.97□□□□□ -0.65
SPARC-208ENST00000538026 YY1P25490 414 aa10.97□□□□□ -0.65
SPARC-208ENST00000538026 NCBP3Q53F19 620 aaKnown RBP10.97□□□□□ -0.65
SPARC-208ENST00000538026 TSR2Q969E8 191 aaKnown RBP10.97□□□□□ -0.65
SPARC-208ENST00000538026 SETDB2Q96T68 719 aa10.97□□□□□ -0.65
SPARC-208ENST00000538026 CHPF2Q9P2E5 772 aa10.97□□□□□ -0.65
SPARC-208ENST00000538026 SALL2Q9Y467 1007 aaPredicted RBP10.97□□□□□ -0.65
SPARC-208ENST00000538026 ERBB4Q15303 1308 aa10.97□□□□□ -0.65
SPARC-208ENST00000538026 UBN2Q6ZU65 1347 aa10.97□□□□□ -0.65
SPARC-208ENST00000538026 RGL2O15211 777 aa10.96□□□□□ -0.65
SPARC-208ENST00000538026 GNAI1P63096 354 aa10.96□□□□□ -0.65
SPARC-208ENST00000538026 COPS6Q7L5N1 327 aa10.96□□□□□ -0.65
SPARC-208ENST00000538026 ZNF34Q8IZ26 560 aa10.96□□□□□ -0.65
SPARC-208ENST00000538026 XAGE3Q8WTP9 111 aa10.96□□□□□ -0.65
SPARC-208ENST00000538026 ZBTB3Q9H5J0 574 aa10.96□□□□□ -0.65
SPARC-208ENST00000538026 DDX21Q9NR30 783 aaKnown RBP eCLIP10.96□□□□□ -0.65
SPARC-208ENST00000538026 NIP7Q9Y221 180 aaKnown RBP eCLIP10.96□□□□□ -0.65
SPARC-208ENST00000538026 SBF1O95248 1867 aa10.95□□□□□ -0.66
SPARC-208ENST00000538026 SLX4Q8IY92 1834 aa10.95□□□□□ -0.66
SPARC-208ENST00000538026 KLRG2A4D1S0 409 aaPredicted RBP10.95□□□□□ -0.66
SPARC-208ENST00000538026 DCAF8L1A6NGE4 600 aa10.95□□□□□ -0.66
SPARC-208ENST00000538026 GRIN3BO60391 1043 aa10.95□□□□□ -0.66
SPARC-208ENST00000538026 HOXB7P09629 217 aa10.95□□□□□ -0.66
SPARC-208ENST00000538026 PRELPP51888 382 aa10.95□□□□□ -0.66
SPARC-208ENST00000538026 BRIP1Q9BX63 1249 aa10.95□□□□□ -0.66
SPARC-208ENST00000538026 BCS1LQ9Y276 419 aa10.95□□□□□ -0.66
SPARC-208ENST00000538026 ATP10DQ9P241 1426 aa10.94□□□□□ -0.66
SPARC-208ENST00000538026 IL16Q14005 1332 aa10.94□□□□□ -0.66
SPARC-208ENST00000538026 ZNF521Q96K83 1311 aa10.94□□□□□ -0.66
SPARC-208ENST00000538026 FAM177BA6PVY3 158 aa10.94□□□□□ -0.66
SPARC-208ENST00000538026 GPTP24298 496 aa10.94□□□□□ -0.66
SPARC-208ENST00000538026 HDGFL1Q5TGJ6 251 aa10.94□□□□□ -0.66
SPARC-208ENST00000538026 SUSD4Q5VX71 490 aa10.94□□□□□ -0.66
SPARC-208ENST00000538026 GIGYF2Q6Y7W6 1299 aaKnown RBP10.94□□□□□ -0.66
SPARC-208ENST00000538026 C3orf67Q6ZVT6 689 aa10.94□□□□□ -0.66
SPARC-208ENST00000538026 C2CD5Q86YS7 1000 aa10.94□□□□□ -0.66
SPARC-208ENST00000538026 PIM2Q9P1W9 311 aa10.94□□□□□ -0.66
SPARC-208ENST00000538026 TNRC6CQ9HCJ0 1690 aaKnown RBP10.94□□□□□ -0.66
SPARC-208ENST00000538026 PCNTO95613 3336 aa10.94□□□□□ -0.66
SPARC-208ENST00000538026 ABCC12Q96J65 1359 aa10.93□□□□□ -0.66
SPARC-208ENST00000538026 AIMP1Q12904 312 aaKnown RBP10.93□□□□□ -0.66
SPARC-208ENST00000538026 DALRD3Q5D0E6 543 aaKnown RBP10.93□□□□□ -0.66
SPARC-208ENST00000538026 SLC51AQ86UW1 340 aa10.93□□□□□ -0.66
SPARC-208ENST00000538026 NUTM1Q86Y26 1132 aa10.93□□□□□ -0.66
SPARC-208ENST00000538026 SYNE4Q8N205 404 aa10.93□□□□□ -0.66
SPARC-208ENST00000538026 CNBD1Q8NA66 436 aa10.93□□□□□ -0.66
SPARC-208ENST00000538026 ZNF784Q8NCA9 323 aaPredicted RBP10.93□□□□□ -0.66
SPARC-208ENST00000538026 PHAXQ9H814 394 aaKnown RBP10.93□□□□□ -0.66
SPARC-208ENST00000538026 ZNF652Q9Y2D9 606 aa10.93□□□□□ -0.66
SPARC-208ENST00000538026 ANKRD36CQ5JPF3 1778 aa10.93□□□□□ -0.66
SPARC-208ENST00000538026 ADCY9O60503 1353 aa10.92□□□□□ -0.66
SPARC-208ENST00000538026 CACNA1SQ13698 1873 aa10.92□□□□□ -0.66
SPARC-208ENST00000538026 CCDC88AQ3V6T2 1871 aa10.92□□□□□ -0.66
SPARC-208ENST00000538026 NTSR2O95665 410 aa10.92□□□□□ -0.66
SPARC-208ENST00000538026 SRGNP10124 158 aa10.92□□□□□ -0.66
SPARC-208ENST00000538026 CALD1Q05682 793 aaKnown RBP10.92□□□□□ -0.66
SPARC-208ENST00000538026 ERFEQ4G0M1 354 aa10.92□□□□□ -0.66
SPARC-208ENST00000538026 KIF6Q6ZMV9 814 aa10.92□□□□□ -0.66
SPARC-208ENST00000538026 NPM2Q86SE8 214 aaKnown RBP10.92□□□□□ -0.66
SPARC-208ENST00000538026 NBPF5PQ86XG9 351 aaPredicted RBP10.92□□□□□ -0.66
SPARC-208ENST00000538026 WDR63Q8IWG1 891 aa10.92□□□□□ -0.66
SPARC-208ENST00000538026 ZNF428Q96B54 188 aa10.92□□□□□ -0.66
SPARC-208ENST00000538026 FANCIQ9NVI1 1328 aa10.91□□□□□ -0.66
SPARC-208ENST00000538026 H0YIN7 160 aa10.91□□□□□ -0.66
SPARC-208ENST00000538026 TCERG1O14776 1098 aaKnown RBP10.91□□□□□ -0.66
SPARC-208ENST00000538026 TCIRG1Q13488 830 aa10.91□□□□□ -0.66
SPARC-208ENST00000538026 G2E3Q7L622 706 aa10.91□□□□□ -0.66
SPARC-208ENST00000538026 MIER1Q8N108 512 aa10.91□□□□□ -0.66
SPARC-208ENST00000538026 C7orf43Q8WVR3 580 aa10.91□□□□□ -0.66
SPARC-208ENST00000538026 DBF4Q9UBU7 674 aaPredicted RBP10.91□□□□□ -0.66
SPARC-208ENST00000538026 TAF1P21675 1872 aa10.9□□□□□ -0.66
SPARC-208ENST00000538026 FER1L6Q2WGJ9 1857 aa10.9□□□□□ -0.66
SPARC-208ENST00000538026 CCER2I3L3R5 266 aa10.9□□□□□ -0.66
SPARC-208ENST00000538026 VAMP4O75379 141 aa10.9□□□□□ -0.66
SPARC-208ENST00000538026 PDE6BP35913 854 aa10.9□□□□□ -0.66
SPARC-208ENST00000538026 OLFM4Q6UX06 510 aa10.9□□□□□ -0.66
SPARC-208ENST00000538026 TPTE2Q6XPS3 522 aa10.9□□□□□ -0.66
SPARC-208ENST00000538026 ARHGAP27Q6ZUM4 889 aa10.9□□□□□ -0.66
SPARC-208ENST00000538026 NLRP10Q86W26 655 aa10.9□□□□□ -0.66
SPARC-208ENST00000538026 TTLL6Q8N841 843 aa10.9□□□□□ -0.66
SPARC-208ENST00000538026 ISCA1Q9BUE6 129 aa10.9□□□□□ -0.66
SPARC-208ENST00000538026 ARFGEF2Q9Y6D5 1785 aa10.9□□□□□ -0.67
SPARC-208ENST00000538026 NFKBIEO00221 500 aa10.89□□□□□ -0.67
SPARC-208ENST00000538026 ST5P78524 1137 aa10.89□□□□□ -0.67
SPARC-208ENST00000538026 EXOSC9Q06265 439 aaKnown RBP10.89□□□□□ -0.67
SPARC-208ENST00000538026 CRY2Q49AN0 593 aa10.89□□□□□ -0.67
SPARC-208ENST00000538026 SLC10A5Q5PT55 438 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms