RNA–Protein interactions for RNA: ENST00000537619.6

PTPRR-205, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best)

Gene PTPRR, Length 1,927 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-205ENST00000537619 ANO2Q9NQ90 1003 aa11.39□□□□□ -0.59
PTPRR-205ENST00000537619 LAMB4A4D0S4 1761 aa11.38□□□□□ -0.59
PTPRR-205ENST00000537619 TRAK2O60296 914 aa11.38□□□□□ -0.59
PTPRR-205ENST00000537619 SASH1O94885 1247 aa11.38□□□□□ -0.59
PTPRR-205ENST00000537619 CYP2E1P05181 493 aaPredicted RBP11.38□□□□□ -0.59
PTPRR-205ENST00000537619 PKP1Q13835 747 aa11.38□□□□□ -0.59
PTPRR-205ENST00000537619 HSP90AB4PQ58FF6 505 aa11.38□□□□□ -0.59
PTPRR-205ENST00000537619 IL27Q8NEV9 243 aa11.38□□□□□ -0.59
PTPRR-205ENST00000537619 MYD88Q99836 296 aa11.38□□□□□ -0.59
PTPRR-205ENST00000537619 METTL22Q9BUU2 404 aaPredicted RBP11.38□□□□□ -0.59
PTPRR-205ENST00000537619 PRDM11Q9NQV5 511 aa11.38□□□□□ -0.59
PTPRR-205ENST00000537619 SLAIN2Q9P270 581 aa11.38□□□□□ -0.59
PTPRR-205ENST00000537619 DDX11L8A8MPP1 907 aa11.37□□□□□ -0.59
PTPRR-205ENST00000537619 CABP4P57796 275 aa11.37□□□□□ -0.59
PTPRR-205ENST00000537619 OS9Q13438 667 aaPredicted RBP11.37□□□□□ -0.59
PTPRR-205ENST00000537619 GCKRQ14397 625 aa11.37□□□□□ -0.59
PTPRR-205ENST00000537619 LARP1Q6PKG0 1096 aaKnown RBP11.37□□□□□ -0.59
PTPRR-205ENST00000537619 JARID2Q92833 1246 aaPredicted RBP11.37□□□□□ -0.59
PTPRR-205ENST00000537619 FMNL2Q96PY5 1086 aa11.37□□□□□ -0.59
PTPRR-205ENST00000537619 AK9Q5TCS8 1911 aa11.37□□□□□ -0.59
PTPRR-205ENST00000537619 KCPQ6ZWJ8 1503 aa11.37□□□□□ -0.59
PTPRR-205ENST00000537619 ARFGEF2Q9Y6D5 1785 aa11.37□□□□□ -0.59
PTPRR-205ENST00000537619 SGSM2O43147 1006 aa11.37□□□□□ -0.59
PTPRR-205ENST00000537619 ST18O60284 1047 aa11.37□□□□□ -0.59
PTPRR-205ENST00000537619 TTC5Q8N0Z6 440 aa11.37□□□□□ -0.59
PTPRR-205ENST00000537619 KLHDC4Q8TBB5 520 aa11.37□□□□□ -0.59
PTPRR-205ENST00000537619 PAPPAQ13219 1627 aa11.37□□□□□ -0.59
PTPRR-205ENST00000537619 TTC41PQ6P2S7 1318 aa11.36□□□□□ -0.59
PTPRR-205ENST00000537619 UBR2Q8IWV8 1755 aa11.36□□□□□ -0.59
PTPRR-205ENST00000537619 LSG1Q9H089 658 aaKnown RBP11.36□□□□□ -0.59
PTPRR-205ENST00000537619 GZF1Q9H116 711 aaPredicted RBP11.36□□□□□ -0.59
PTPRR-205ENST00000537619 TLR7Q9NYK1 1049 aaKnown RBP11.36□□□□□ -0.59
PTPRR-205ENST00000537619 NBPF26B4DH59 902 aa11.35□□□□□ -0.59
PTPRR-205ENST00000537619 NEK4P51957 841 aa11.35□□□□□ -0.59
PTPRR-205ENST00000537619 NBPF14Q5TI25 921 aa11.35□□□□□ -0.59
PTPRR-205ENST00000537619 NBPF10Q6P3W6 841 aaKnown RBP11.35□□□□□ -0.59
PTPRR-205ENST00000537619 CLEC17AQ6ZS10 378 aa11.35□□□□□ -0.59
PTPRR-205ENST00000537619 TOM1L2Q6ZVM7 507 aa11.35□□□□□ -0.59
PTPRR-205ENST00000537619 NBPF15Q8N660 670 aa11.35□□□□□ -0.59
PTPRR-205ENST00000537619 ZCRB1Q8TBF4 217 aaKnown RBP11.35□□□□□ -0.59
PTPRR-205ENST00000537619 HDAC5Q9UQL6 1122 aa11.35□□□□□ -0.59
PTPRR-205ENST00000537619 RAD50Q92878 1312 aa11.35□□□□□ -0.59
PTPRR-205ENST00000537619 FSD2A1L4K1 749 aa11.35□□□□□ -0.59
PTPRR-205ENST00000537619 GLRX3O76003 335 aaKnown RBP11.35□□□□□ -0.59
PTPRR-205ENST00000537619 HSPA4P34932 840 aa11.35□□□□□ -0.59
PTPRR-205ENST00000537619 ANAPC15P60006 121 aa11.35□□□□□ -0.59
PTPRR-205ENST00000537619 ANKRD13DQ6ZTN6 518 aa11.35□□□□□ -0.59
PTPRR-205ENST00000537619 CNTROBQ8N137 903 aa11.35□□□□□ -0.59
PTPRR-205ENST00000537619 CLASRPQ8N2M8 674 aaKnown RBP11.35□□□□□ -0.59
PTPRR-205ENST00000537619 EAF2Q96CJ1 260 aaPredicted RBP11.35□□□□□ -0.59
PTPRR-205ENST00000537619 TMX3Q96JJ7 454 aa11.35□□□□□ -0.59
PTPRR-205ENST00000537619 ZDHHC9Q9Y397 364 aa11.35□□□□□ -0.59
PTPRR-205ENST00000537619 PCDH11XQ9BZA7 1347 aa11.34□□□□□ -0.59
PTPRR-205ENST00000537619 PCDH11YQ9BZA8 1340 aa11.34□□□□□ -0.59
PTPRR-205ENST00000537619 NHSL1Q5SYE7 1610 aa11.34□□□□□ -0.59
PTPRR-205ENST00000537619 TOGARAM1Q9Y4F4 1720 aa11.34□□□□□ -0.59
PTPRR-205ENST00000537619 BAG4O95429 457 aaKnown RBP11.34□□□□□ -0.59
PTPRR-205ENST00000537619 RFX5P48382 616 aaPredicted RBP11.34□□□□□ -0.59
PTPRR-205ENST00000537619 CASP7P55210 303 aa11.34□□□□□ -0.59
PTPRR-205ENST00000537619 AACSQ86V21 672 aa11.34□□□□□ -0.59
PTPRR-205ENST00000537619 ERC1Q8IUD2 1116 aa11.34□□□□□ -0.59
PTPRR-205ENST00000537619 GBP4Q96PP9 640 aa11.34□□□□□ -0.59
PTPRR-205ENST00000537619 CARD10Q9BWT7 1032 aa11.34□□□□□ -0.59
PTPRR-205ENST00000537619 SIL1Q9H173 461 aa11.34□□□□□ -0.59
PTPRR-205ENST00000537619 ECHDC1Q9NTX5 307 aa11.34□□□□□ -0.59
PTPRR-205ENST00000537619 AFDNP55196 1824 aaKnown RBP11.34□□□□□ -0.59
PTPRR-205ENST00000537619 ATP5J2-PTCD1G3V325 749 aa11.33□□□□□ -0.6
PTPRR-205ENST00000537619 PTCD1O75127 700 aaKnown RBP11.33□□□□□ -0.6
PTPRR-205ENST00000537619 MCCP23508 829 aa11.33□□□□□ -0.6
PTPRR-205ENST00000537619 NEXNQ0ZGT2 675 aa11.33□□□□□ -0.6
PTPRR-205ENST00000537619 CUL4AQ13619 759 aa11.33□□□□□ -0.6
PTPRR-205ENST00000537619 NKX1-1Q15270 411 aaPredicted RBP11.33□□□□□ -0.6
PTPRR-205ENST00000537619 UPF3BQ9BZI7 483 aaKnown RBP11.33□□□□□ -0.6
PTPRR-205ENST00000537619 CCDC8Q9H0W5 538 aaPredicted RBP11.33□□□□□ -0.6
PTPRR-205ENST00000537619 TNS2Q63HR2 1409 aa11.33□□□□□ -0.6
PTPRR-205ENST00000537619 NUP188Q5SRE5 1749 aa11.33□□□□□ -0.6
PTPRR-205ENST00000537619 IFIT2P09913 472 aaKnown RBP11.33□□□□□ -0.6
PTPRR-205ENST00000537619 CWC27Q6UX04 472 aaKnown RBP11.33□□□□□ -0.6
PTPRR-205ENST00000537619 TTLL7Q6ZT98 887 aa11.33□□□□□ -0.6
PTPRR-205ENST00000537619 RASEFQ8IZ41 740 aa11.33□□□□□ -0.6
PTPRR-205ENST00000537619 COL15A1P39059 1388 aa11.33□□□□□ -0.6
PTPRR-205ENST00000537619 TJP1Q07157 1748 aa11.32□□□□□ -0.6
PTPRR-205ENST00000537619 EPB41L2O43491 1005 aaKnown RBP11.32□□□□□ -0.6
PTPRR-205ENST00000537619 IL2RBP14784 551 aa11.32□□□□□ -0.6
PTPRR-205ENST00000537619 G3BP1Q13283 466 aaKnown RBP eCLIP11.32□□□□□ -0.6
PTPRR-205ENST00000537619 NOL8Q76FK4 1167 aaKnown RBP11.32□□□□□ -0.6
PTPRR-205ENST00000537619 STRN4Q9NRL3 753 aa11.32□□□□□ -0.6
PTPRR-205ENST00000537619 SNX14Q9Y5W7 946 aa11.32□□□□□ -0.6
PTPRR-205ENST00000537619 ERVV-2B6SEH9 535 aa11.31□□□□□ -0.6
PTPRR-205ENST00000537619 A1BGP04217 495 aa11.31□□□□□ -0.6
PTPRR-205ENST00000537619 PTH1RQ03431 593 aa11.31□□□□□ -0.6
PTPRR-205ENST00000537619 PTPN12Q05209 780 aaKnown RBP11.31□□□□□ -0.6
PTPRR-205ENST00000537619 RABL6Q3YEC7 729 aaPredicted RBP11.31□□□□□ -0.6
PTPRR-205ENST00000537619 UBE3BQ7Z3V4 1068 aa11.31□□□□□ -0.6
PTPRR-205ENST00000537619 PLBD2Q8NHP8 589 aa11.31□□□□□ -0.6
PTPRR-205ENST00000537619 CHAMP1Q96JM3 812 aa11.31□□□□□ -0.6
PTPRR-205ENST00000537619 CWC22Q9HCG8 908 aaKnown RBP11.31□□□□□ -0.6
PTPRR-205ENST00000537619 NUCB2P80303 420 aa11.31□□□□□ -0.6
PTPRR-205ENST00000537619 DDX54Q8TDD1 881 aaKnown RBP11.31□□□□□ -0.6
PTPRR-205ENST00000537619 ERBB4Q15303 1308 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms