RNA–Protein interactions for RNA: ENST00000537568.1

LMO3-216, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 594 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-216ENST00000537568 SERPINA10Q9UK55 444 aa11.99□□□□□ -0.49
LMO3-216ENST00000537568 NRKQ7Z2Y5 1582 aa11.99□□□□□ -0.49
LMO3-216ENST00000537568 SHANK3Q9BYB0 1731 aa11.99□□□□□ -0.49
LMO3-216ENST00000537568 NUP188Q5SRE5 1749 aa11.98□□□□□ -0.49
LMO3-216ENST00000537568 XRN1Q8IZH2 1706 aaKnown RBP11.98□□□□□ -0.49
LMO3-216ENST00000537568 F12P00748 615 aaPredicted RBP11.98□□□□□ -0.49
LMO3-216ENST00000537568 CCDC9Q9Y3X0 531 aaKnown RBP11.98□□□□□ -0.49
LMO3-216ENST00000537568 RREB1Q92766 1687 aa11.97□□□□□ -0.49
LMO3-216ENST00000537568 HSPA6P17066 643 aa11.97□□□□□ -0.49
LMO3-216ENST00000537568 RTL5Q5HYW3 569 aaPredicted RBP11.96□□□□□ -0.49
LMO3-216ENST00000537568 ZNF775Q96BV0 537 aaPredicted RBP11.96□□□□□ -0.49
LMO3-216ENST00000537568 COG6Q9Y2V7 657 aa11.96□□□□□ -0.49
LMO3-216ENST00000537568 PXDNQ92626 1479 aa11.95□□□□□ -0.5
LMO3-216ENST00000537568 FYCO1Q9BQS8 1478 aa11.95□□□□□ -0.5
LMO3-216ENST00000537568 EEA1Q15075 1411 aa11.95□□□□□ -0.5
LMO3-216ENST00000537568 MYOM1P52179 1685 aa11.95□□□□□ -0.5
LMO3-216ENST00000537568 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.95□□□□□ -0.5
LMO3-216ENST00000537568 PDGFDQ9GZP0 370 aaPredicted RBP11.95□□□□□ -0.5
LMO3-216ENST00000537568 GMPR2Q9P2T1 348 aaKnown RBP11.95□□□□□ -0.5
LMO3-216ENST00000537568 ARHGEF5Q12774 1597 aa11.95□□□□□ -0.5
LMO3-216ENST00000537568 NALCNQ8IZF0 1738 aa11.94□□□□□ -0.5
LMO3-216ENST00000537568 PARD3Q8TEW0 1356 aa11.94□□□□□ -0.5
LMO3-216ENST00000537568 SYT17Q9BSW7 474 aa11.94□□□□□ -0.5
LMO3-216ENST00000537568 SNRKQ9NRH2 765 aa11.94□□□□□ -0.5
LMO3-216ENST00000537568 TLL2Q9Y6L7 1015 aa11.94□□□□□ -0.5
LMO3-216ENST00000537568 MYO5BQ9ULV0 1848 aa11.94□□□□□ -0.5
LMO3-216ENST00000537568 TMEM131LA2VDJ0 1609 aa11.93□□□□□ -0.5
LMO3-216ENST00000537568 TRIM37O94972 964 aa11.92□□□□□ -0.5
LMO3-216ENST00000537568 RFC5P40937 340 aa11.92□□□□□ -0.5
LMO3-216ENST00000537568 HELBQ8NG08 1087 aaPredicted RBP11.92□□□□□ -0.5
LMO3-216ENST00000537568 FHDC1Q9C0D6 1143 aaPredicted RBP11.92□□□□□ -0.5
LMO3-216ENST00000537568 SLC52A1Q9NWF4 448 aa11.92□□□□□ -0.5
LMO3-216ENST00000537568 LMTK2Q8IWU2 1503 aa11.91□□□□□ -0.5
LMO3-216ENST00000537568 TSPY4P0CV99 314 aa11.91□□□□□ -0.5
LMO3-216ENST00000537568 TSPY10P0CW01 314 aa11.91□□□□□ -0.5
LMO3-216ENST00000537568 DNAJC5GQ8N7S2 189 aa11.91□□□□□ -0.5
LMO3-216ENST00000537568 ATP13A2Q9NQ11 1180 aa11.91□□□□□ -0.5
LMO3-216ENST00000537568 ZNF330Q9Y3S2 320 aaPredicted RBP11.91□□□□□ -0.5
LMO3-216ENST00000537568 WASF2Q9Y6W5 498 aa11.91□□□□□ -0.5
LMO3-216ENST00000537568 ADGRB2O60241 1585 aa11.91□□□□□ -0.5
LMO3-216ENST00000537568 CASZ1Q86V15 1759 aa11.9□□□□□ -0.5
LMO3-216ENST00000537568 VARSP26640 1264 aaKnown RBP11.9□□□□□ -0.5
LMO3-216ENST00000537568 XPCQ01831 940 aaPredicted RBP11.9□□□□□ -0.5
LMO3-216ENST00000537568 FOXJ1Q92949 421 aa11.9□□□□□ -0.5
LMO3-216ENST00000537568 USP32Q8NFA0 1604 aa11.89□□□□□ -0.51
LMO3-216ENST00000537568 RPRD2Q5VT52 1461 aaKnown RBP11.89□□□□□ -0.51
LMO3-216ENST00000537568 APBA3O96018 575 aa11.89□□□□□ -0.51
LMO3-216ENST00000537568 BANK1Q8NDB2 785 aa11.89□□□□□ -0.51
LMO3-216ENST00000537568 TRAIPQ9BWF2 469 aa11.89□□□□□ -0.51
LMO3-216ENST00000537568 ADGRL2O95490 1459 aa11.89□□□□□ -0.51
LMO3-216ENST00000537568 CEP162Q5TB80 1403 aa11.88□□□□□ -0.51
LMO3-216ENST00000537568 C11orf95C9JLR9 678 aaPredicted RBP11.88□□□□□ -0.51
LMO3-216ENST00000537568 NBPF8Q3BBV2 869 aa11.88□□□□□ -0.51
LMO3-216ENST00000537568 NBPF14Q5TI25 921 aa11.88□□□□□ -0.51
LMO3-216ENST00000537568 TNS4Q8IZW8 715 aa11.88□□□□□ -0.51
LMO3-216ENST00000537568 NRXN3Q9Y4C0 1643 aa11.88□□□□□ -0.51
LMO3-216ENST00000537568 METP08581 1390 aa11.88□□□□□ -0.51
LMO3-216ENST00000537568 DUOX2Q9NRD8 1548 aa11.87□□□□□ -0.51
LMO3-216ENST00000537568 PTPN23Q9H3S7 1636 aa11.87□□□□□ -0.51
LMO3-216ENST00000537568 FAM83GA6ND36 823 aa11.87□□□□□ -0.51
LMO3-216ENST00000537568 AEBP1Q8IUX7 1158 aa11.87□□□□□ -0.51
LMO3-216ENST00000537568 PLCH1Q4KWH8 1693 aa11.87□□□□□ -0.51
LMO3-216ENST00000537568 GCC2Q8IWJ2 1684 aa11.87□□□□□ -0.51
LMO3-216ENST00000537568 ZBTB7AO95365 584 aa11.86□□□□□ -0.51
LMO3-216ENST00000537568 KCTD17Q8N5Z5 321 aa11.86□□□□□ -0.51
LMO3-216ENST00000537568 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.86□□□□□ -0.51
LMO3-216ENST00000537568 THSD7AQ9UPZ6 1657 aa11.85□□□□□ -0.51
LMO3-216ENST00000537568 CTDSPL2Q05D32 466 aa11.85□□□□□ -0.51
LMO3-216ENST00000537568 TMEM259Q4ZIN3 620 aa11.85□□□□□ -0.51
LMO3-216ENST00000537568 C4orf48Q5BLP8 95 aa11.85□□□□□ -0.51
LMO3-216ENST00000537568 NWD2Q9ULI1 1742 aa11.85□□□□□ -0.51
LMO3-216ENST00000537568 NPHP3Q7Z494 1330 aa11.85□□□□□ -0.51
LMO3-216ENST00000537568 AGERQ15109 404 aa11.84□□□□□ -0.51
LMO3-216ENST00000537568 MPNDQ8N594 471 aa11.84□□□□□ -0.51
LMO3-216ENST00000537568 FAM174AQ8TBP5 190 aa11.84□□□□□ -0.51
LMO3-216ENST00000537568 DLC1Q96QB1 1528 aa11.83□□□□□ -0.52
LMO3-216ENST00000537568 FOXO3O43524 673 aa11.83□□□□□ -0.52
LMO3-216ENST00000537568 RETREG2Q8NC44 543 aa11.83□□□□□ -0.52
LMO3-216ENST00000537568 GDPD2Q9HCC8 539 aa11.83□□□□□ -0.52
LMO3-216ENST00000537568 NNTQ13423 1086 aa11.82□□□□□ -0.52
LMO3-216ENST00000537568 BPHLQ86WA6 291 aaPredicted RBP11.82□□□□□ -0.52
LMO3-216ENST00000537568 ERBINQ96RT1 1412 aa11.82□□□□□ -0.52
LMO3-216ENST00000537568 NRAPQ86VF7 1730 aa11.82□□□□□ -0.52
LMO3-216ENST00000537568 SPATA31A3Q5VYP0 1347 aa11.82□□□□□ -0.52
LMO3-216ENST00000537568 CAPN5O15484 640 aaPredicted RBP11.81□□□□□ -0.52
LMO3-216ENST00000537568 BMP1P13497 986 aa11.81□□□□□ -0.52
LMO3-216ENST00000537568 SNRPBP14678 240 aaKnown RBP11.81□□□□□ -0.52
LMO3-216ENST00000537568 ARMC2Q8NEN0 867 aa11.81□□□□□ -0.52
LMO3-216ENST00000537568 TRIM47Q96LD4 638 aa11.81□□□□□ -0.52
LMO3-216ENST00000537568 ATP10DQ9P241 1426 aa11.8□□□□□ -0.52
LMO3-216ENST00000537568 ABL2P42684 1182 aa11.8□□□□□ -0.52
LMO3-216ENST00000537568 ARID5BQ14865 1188 aa11.8□□□□□ -0.52
LMO3-216ENST00000537568 PPP2R2DQ66LE6 453 aa11.8□□□□□ -0.52
LMO3-216ENST00000537568 FAM196AQ6ZSG2 479 aa11.8□□□□□ -0.52
LMO3-216ENST00000537568 WWC1Q8IX03 1113 aa11.8□□□□□ -0.52
LMO3-216ENST00000537568 MTMR14Q8NCE2 650 aa11.8□□□□□ -0.52
LMO3-216ENST00000537568 LRRN4Q8WUT4 740 aa11.8□□□□□ -0.52
LMO3-216ENST00000537568 CDK15Q96Q40 435 aa11.8□□□□□ -0.52
LMO3-216ENST00000537568 SENP2Q9HC62 589 aa11.8□□□□□ -0.52
LMO3-216ENST00000537568 MAP3K5Q99683 1374 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms