RNA–Protein interactions for RNA: ENST00000536723.5

USP30-209, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 5

Gene USP30, Length 826 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-209ENST00000536723 RGS19P49795 217 aa25.52■■□□□ 1.68
USP30-209ENST00000536723 MAP1SQ66K74 1059 aaPredicted RBP25.52■■□□□ 1.68
USP30-209ENST00000536723 CNBD1Q8NA66 436 aa25.52■■□□□ 1.68
USP30-209ENST00000536723 C7orf43Q8WVR3 580 aa25.52■■□□□ 1.68
USP30-209ENST00000536723 PANK3Q9H999 370 aa25.52■■□□□ 1.68
USP30-209ENST00000536723 ZNF330Q9Y3S2 320 aaPredicted RBP25.52■■□□□ 1.68
USP30-209ENST00000536723 SETDB2Q96T68 719 aa25.51■■□□□ 1.67
USP30-209ENST00000536723 NPHP1O15259 732 aa25.5■■□□□ 1.67
USP30-209ENST00000536723 ST5P78524 1137 aa25.49■■□□□ 1.67
USP30-209ENST00000536723 MTHFSDQ2M296 383 aaKnown RBP25.49■■□□□ 1.67
USP30-209ENST00000536723 PNMA8AQ86V59 439 aaPredicted RBP25.49■■□□□ 1.67
USP30-209ENST00000536723 ABT1Q9ULW3 272 aaKnown RBP25.49■■□□□ 1.67
USP30-209ENST00000536723 CCDC93Q567U6 631 aa25.48■■□□□ 1.67
USP30-209ENST00000536723 TTC5Q8N0Z6 440 aa25.48■■□□□ 1.67
USP30-209ENST00000536723 ZNF277Q9NRM2 450 aaPredicted RBP25.48■■□□□ 1.67
USP30-209ENST00000536723 HMOX1P09601 288 aa25.47■■□□□ 1.67
USP30-209ENST00000536723 IL6STP40189 918 aaPredicted RBP25.47■■□□□ 1.67
USP30-209ENST00000536723 ZNF496Q96IT1 587 aaPredicted RBP25.47■■□□□ 1.67
USP30-209ENST00000536723 RNF123Q5XPI4 1314 aa25.46■■□□□ 1.67
USP30-209ENST00000536723 FKBP4Q02790 459 aaKnown RBP eCLIP25.46■■□□□ 1.67
USP30-209ENST00000536723 ADAMTSL1Q8N6G6 1762 aa25.46■■□□□ 1.67
USP30-209ENST00000536723 CAMTA2O94983 1202 aa25.45■■□□□ 1.66
USP30-209ENST00000536723 OLFM4Q6UX06 510 aa25.44■■□□□ 1.66
USP30-209ENST00000536723 SCN7AQ01118 1682 aa25.44■■□□□ 1.66
USP30-209ENST00000536723 A1BGP04217 495 aa25.43■■□□□ 1.66
USP30-209ENST00000536723 TEX13AQ9BXU3 409 aaPredicted RBP25.43■■□□□ 1.66
USP30-209ENST00000536723 DDX21Q9NR30 783 aaKnown RBP eCLIP25.43■■□□□ 1.66
USP30-209ENST00000536723 UBR2Q8IWV8 1755 aa25.43■■□□□ 1.66
USP30-209ENST00000536723 HEG1Q9ULI3 1381 aa25.43■■□□□ 1.66
USP30-209ENST00000536723 FZD9O00144 591 aa25.42■■□□□ 1.66
USP30-209ENST00000536723 CAPNS2Q96L46 248 aa25.42■■□□□ 1.66
USP30-209ENST00000536723 NPR1P16066 1061 aa25.41■■□□□ 1.66
USP30-209ENST00000536723 BEGAINQ9BUH8 593 aa25.41■■□□□ 1.66
USP30-209ENST00000536723 CACNA1SQ13698 1873 aa25.4■■□□□ 1.66
USP30-209ENST00000536723 FMR1Q06787 632 aaKnown RBP eCLIP25.4■■□□□ 1.66
USP30-209ENST00000536723 ZNF790Q6PG37 636 aa25.4■■□□□ 1.66
USP30-209ENST00000536723 PAXIP1Q6ZW49 1069 aaPredicted RBP25.4■■□□□ 1.66
USP30-209ENST00000536723 GPR101Q96P66 508 aaPredicted RBP25.4■■□□□ 1.66
USP30-209ENST00000536723 ARFGEF2Q9Y6D5 1785 aa25.39■■□□□ 1.66
USP30-209ENST00000536723 GRM1Q13255 1194 aa25.39■■□□□ 1.66
USP30-209ENST00000536723 NPM2Q86SE8 214 aaKnown RBP25.39■■□□□ 1.66
USP30-209ENST00000536723 RTKN2Q8IZC4 609 aa25.39■■□□□ 1.66
USP30-209ENST00000536723 GPC2Q8N158 579 aa25.39■■□□□ 1.66
USP30-209ENST00000536723 KLRG2A4D1S0 409 aaPredicted RBP25.38■■□□□ 1.65
USP30-209ENST00000536723 IARSP41252 1262 aaKnown RBP25.38■■□□□ 1.65
USP30-209ENST00000536723 ECE1P42892 770 aa25.38■■□□□ 1.65
USP30-209ENST00000536723 CYP4F22Q6NT55 531 aa25.38■■□□□ 1.65
USP30-209ENST00000536723 NBPF5PQ86XG9 351 aaPredicted RBP25.38■■□□□ 1.65
USP30-209ENST00000536723 DZIP3Q86Y13 1208 aaKnown RBP25.38■■□□□ 1.65
USP30-209ENST00000536723 TSKSQ9UJT2 592 aa25.38■■□□□ 1.65
USP30-209ENST00000536723 SYNE4Q8N205 404 aa25.37■■□□□ 1.65
USP30-209ENST00000536723 IL17REQ8NFR9 667 aa25.36■■□□□ 1.65
USP30-209ENST00000536723 TEFQ10587 303 aa25.35■■□□□ 1.65
USP30-209ENST00000536723 CFAP44Q96MT7 982 aa25.35■■□□□ 1.65
USP30-209ENST00000536723 CST9Q5W186 159 aa25.34■■□□□ 1.65
USP30-209ENST00000536723 FMNL2Q96PY5 1086 aa25.34■■□□□ 1.65
USP30-209ENST00000536723 THSD7BQ9C0I4 1608 aa25.34■■□□□ 1.65
USP30-209ENST00000536723 GJA3Q9Y6H8 435 aa25.33■■□□□ 1.65
USP30-209ENST00000536723 PIP4K2AP48426 406 aaPredicted RBP25.32■■□□□ 1.64
USP30-209ENST00000536723 CLEC4GQ6UXB4 293 aa25.32■■□□□ 1.64
USP30-209ENST00000536723 JDP2Q8WYK2 163 aa25.32■■□□□ 1.64
USP30-209ENST00000536723 MCOLN1Q9GZU1 580 aa25.32■■□□□ 1.64
USP30-209ENST00000536723 KNSTRNQ9Y448 316 aa25.32■■□□□ 1.64
USP30-209ENST00000536723 TRAF5O00463 557 aa25.31■■□□□ 1.64
USP30-209ENST00000536723 AOC2O75106 756 aa25.31■■□□□ 1.64
USP30-209ENST00000536723 TPTE2Q6XPS3 522 aa25.31■■□□□ 1.64
USP30-209ENST00000536723 KCNQ3O43525 872 aa25.3■■□□□ 1.64
USP30-209ENST00000536723 LMOD1P29536 600 aaPredicted RBP25.3■■□□□ 1.64
USP30-209ENST00000536723 MAP2K2P36507 400 aa25.3■■□□□ 1.64
USP30-209ENST00000536723 EPS15P42566 896 aa25.3■■□□□ 1.64
USP30-209ENST00000536723 USP16Q9Y5T5 823 aa25.3■■□□□ 1.64
USP30-209ENST00000536723 TLL2Q9Y6L7 1015 aa25.3■■□□□ 1.64
USP30-209ENST00000536723 ALDH1B1P30837 517 aa25.29■■□□□ 1.64
USP30-209ENST00000536723 SCNN1DP51172 638 aa25.29■■□□□ 1.64
USP30-209ENST00000536723 EIF6P56537 245 aaKnown RBP25.29■■□□□ 1.64
USP30-209ENST00000536723 GNAT3A8MTJ3 354 aa25.28■■□□□ 1.64
USP30-209ENST00000536723 DIAPH1O60610 1272 aaKnown RBP25.28■■□□□ 1.64
USP30-209ENST00000536723 PSMD1Q99460 953 aa25.28■■□□□ 1.64
USP30-209ENST00000536723 ZNF652Q9Y2D9 606 aa25.28■■□□□ 1.64
USP30-209ENST00000536723 LTBP1Q14766 1721 aa25.27■■□□□ 1.64
USP30-209ENST00000536723 FAM177BA6PVY3 158 aa25.27■■□□□ 1.64
USP30-209ENST00000536723 NIP7Q9Y221 180 aaKnown RBP eCLIP25.27■■□□□ 1.64
USP30-209ENST00000536723 SNED1Q8TER0 1413 aa25.27■■□□□ 1.64
USP30-209ENST00000536723 BCORQ6W2J9 1755 aa25.26■■□□□ 1.63
USP30-209ENST00000536723 AMER1Q5JTC6 1135 aaPredicted RBP25.26■■□□□ 1.63
USP30-209ENST00000536723 COL4A5P29400 1685 aa25.26■■□□□ 1.63
USP30-209ENST00000536723 USP50Q70EL3 339 aaPredicted RBP25.25■■□□□ 1.63
USP30-209ENST00000536723 PRAMEF22A3QJZ6 481 aa25.24■■□□□ 1.63
USP30-209ENST00000536723 CA12O43570 354 aa25.24■■□□□ 1.63
USP30-209ENST00000536723 HSPA5P11021 654 aaKnown RBP25.24■■□□□ 1.63
USP30-209ENST00000536723 TIMELESSQ9UNS1 1208 aa25.24■■□□□ 1.63
USP30-209ENST00000536723 BTBD11A6QL63 1104 aa25.23■■□□□ 1.63
USP30-209ENST00000536723 DGKZQ13574 1117 aa25.23■■□□□ 1.63
USP30-209ENST00000536723 SAPCD2Q86UD0 394 aa25.23■■□□□ 1.63
USP30-209ENST00000536723 GAS2L2Q8NHY3 880 aa25.23■■□□□ 1.63
USP30-209ENST00000536723 EIF4G2P78344 907 aaKnown RBP eCLIP25.22■■□□□ 1.63
USP30-209ENST00000536723 CC2D2BQ6DHV5 1058 aa25.21■■□□□ 1.63
USP30-209ENST00000536723 GTF2E1P29083 439 aaPredicted RBP25.2■■□□□ 1.62
USP30-209ENST00000536723 LARGE2Q8N3Y3 721 aa25.2■■□□□ 1.62
USP30-209ENST00000536723 SIPA1L3O60292 1781 aaPredicted RBP25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms