RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 DLEC1Q9Y238 1755 aa18.78■□□□□ 0.6
RTN3P1-201ENST00000536295 ANKRD31Q8N7Z5 1873 aa18.78■□□□□ 0.6
RTN3P1-201ENST00000536295 FAM177BA6PVY3 158 aa18.78■□□□□ 0.6
RTN3P1-201ENST00000536295 MYL6BP14649 208 aa18.78■□□□□ 0.6
RTN3P1-201ENST00000536295 LMOD3Q0VAK6 560 aa18.78■□□□□ 0.6
RTN3P1-201ENST00000536295 PRKRIP1Q9H875 184 aaPredicted RBP18.78■□□□□ 0.6
RTN3P1-201ENST00000536295 ZNF219Q9P2Y4 722 aaPredicted RBP18.78■□□□□ 0.6
RTN3P1-201ENST00000536295 NIP7Q9Y221 180 aaKnown RBP eCLIP18.78■□□□□ 0.6
RTN3P1-201ENST00000536295 HLFQ16534 295 aa18.77■□□□□ 0.6
RTN3P1-201ENST00000536295 ADAMTS8Q9UP79 889 aa18.77■□□□□ 0.6
RTN3P1-201ENST00000536295 RUNDC1Q96C34 613 aa18.76■□□□□ 0.59
RTN3P1-201ENST00000536295 PDZRN3Q9UPQ7 1066 aa18.76■□□□□ 0.59
RTN3P1-201ENST00000536295 COL11A2P13942 1736 aaPredicted RBP18.75■□□□□ 0.59
RTN3P1-201ENST00000536295 KIF3CO14782 793 aa18.75■□□□□ 0.59
RTN3P1-201ENST00000536295 C21orf2O43822 256 aa18.74■□□□□ 0.59
RTN3P1-201ENST00000536295 EIF2S2P20042 333 aaKnown RBP18.74■□□□□ 0.59
RTN3P1-201ENST00000536295 KIF6Q6ZMV9 814 aa18.74■□□□□ 0.59
RTN3P1-201ENST00000536295 TTLL7Q6ZT98 887 aa18.74■□□□□ 0.59
RTN3P1-201ENST00000536295 NMRK2Q9NPI5 230 aa18.74■□□□□ 0.59
RTN3P1-201ENST00000536295 LAS1LQ9Y4W2 734 aaKnown RBP18.74■□□□□ 0.59
RTN3P1-201ENST00000536295 TPTE2Q6XPS3 522 aa18.73■□□□□ 0.59
RTN3P1-201ENST00000536295 ZBTB3Q9H5J0 574 aa18.73■□□□□ 0.59
RTN3P1-201ENST00000536295 MAP3K15Q6ZN16 1313 aa18.73■□□□□ 0.59
RTN3P1-201ENST00000536295 RGL2O15211 777 aa18.72■□□□□ 0.59
RTN3P1-201ENST00000536295 SRGNP10124 158 aa18.72■□□□□ 0.59
RTN3P1-201ENST00000536295 TRIM35Q9UPQ4 493 aa18.72■□□□□ 0.59
RTN3P1-201ENST00000536295 NFKBIEO00221 500 aa18.71■□□□□ 0.59
RTN3P1-201ENST00000536295 LMNB1P20700 586 aa18.71■□□□□ 0.59
RTN3P1-201ENST00000536295 GTF2E1P29083 439 aaPredicted RBP18.71■□□□□ 0.59
RTN3P1-201ENST00000536295 ZEB1P37275 1124 aaPredicted RBP18.71■□□□□ 0.59
RTN3P1-201ENST00000536295 PRELPP51888 382 aa18.71■□□□□ 0.59
RTN3P1-201ENST00000536295 STYK1Q6J9G0 422 aa18.71■□□□□ 0.59
RTN3P1-201ENST00000536295 NECTIN2Q92692 538 aa18.71■□□□□ 0.59
RTN3P1-201ENST00000536295 CNKSR1Q969H4 720 aa18.71■□□□□ 0.59
RTN3P1-201ENST00000536295 MASTLQ96GX5 879 aa18.71■□□□□ 0.59
RTN3P1-201ENST00000536295 BABAM1Q9NWV8 329 aa18.71■□□□□ 0.59
RTN3P1-201ENST00000536295 SBF1O95248 1867 aa18.71■□□□□ 0.59
RTN3P1-201ENST00000536295 ERVV-1B6SEH8 477 aa18.7■□□□□ 0.58
RTN3P1-201ENST00000536295 PRPF40BQ6NWY9 871 aaKnown RBP18.7■□□□□ 0.58
RTN3P1-201ENST00000536295 ERBB4Q15303 1308 aa18.7■□□□□ 0.58
RTN3P1-201ENST00000536295 ANXA1P04083 346 aa18.69■□□□□ 0.58
RTN3P1-201ENST00000536295 GPTP24298 496 aa18.69■□□□□ 0.58
RTN3P1-201ENST00000536295 KDM2BQ8NHM5 1336 aa18.69■□□□□ 0.58
RTN3P1-201ENST00000536295 CHL1O00533 1208 aa18.68■□□□□ 0.58
RTN3P1-201ENST00000536295 KRT24Q2M2I5 525 aa18.68■□□□□ 0.58
RTN3P1-201ENST00000536295 PROSER3Q2NL68 480 aa18.68■□□□□ 0.58
RTN3P1-201ENST00000536295 NUTM1Q86Y26 1132 aa18.68■□□□□ 0.58
RTN3P1-201ENST00000536295 CACNA1SQ13698 1873 aa18.67■□□□□ 0.58
RTN3P1-201ENST00000536295 NPR1P16066 1061 aa18.67■□□□□ 0.58
RTN3P1-201ENST00000536295 PDIA6Q15084 440 aa18.67■□□□□ 0.58
RTN3P1-201ENST00000536295 NYXQ9GZU5 481 aa18.67■□□□□ 0.58
RTN3P1-201ENST00000536295 SLX4Q8IY92 1834 aa18.67■□□□□ 0.58
RTN3P1-201ENST00000536295 NUP98P52948 1817 aa18.66■□□□□ 0.58
RTN3P1-201ENST00000536295 TOMM70O94826 608 aa18.66■□□□□ 0.58
RTN3P1-201ENST00000536295 ERFEQ4G0M1 354 aa18.66■□□□□ 0.58
RTN3P1-201ENST00000536295 C16orf71Q8IYS4 520 aaPredicted RBP18.66■□□□□ 0.58
RTN3P1-201ENST00000536295 RRAGCQ9HB90 399 aa18.66■□□□□ 0.58
RTN3P1-201ENST00000536295 UBN2Q6ZU65 1347 aa18.66■□□□□ 0.58
RTN3P1-201ENST00000536295 ABCC12Q96J65 1359 aa18.66■□□□□ 0.58
RTN3P1-201ENST00000536295 KLRG2A4D1S0 409 aaPredicted RBP18.65■□□□□ 0.58
RTN3P1-201ENST00000536295 HSPA6P17066 643 aa18.65■□□□□ 0.58
RTN3P1-201ENST00000536295 AIMP1Q12904 312 aaKnown RBP18.65■□□□□ 0.58
RTN3P1-201ENST00000536295 SUSD4Q5VX71 490 aa18.65■□□□□ 0.58
RTN3P1-201ENST00000536295 GIGYF2Q6Y7W6 1299 aaKnown RBP18.65■□□□□ 0.58
RTN3P1-201ENST00000536295 LRP10Q7Z4F1 713 aa18.65■□□□□ 0.58
RTN3P1-201ENST00000536295 TAOK3Q9H2K8 898 aa18.65■□□□□ 0.58
RTN3P1-201ENST00000536295 APAF1O14727 1248 aa18.64■□□□□ 0.57
RTN3P1-201ENST00000536295 SOGA3Q5TF21 947 aa18.64■□□□□ 0.57
RTN3P1-201ENST00000536295 ZC3H4Q9UPT8 1303 aaKnown RBP18.64■□□□□ 0.57
RTN3P1-201ENST00000536295 TIAM2Q8IVF5 1701 aa18.63■□□□□ 0.57
RTN3P1-201ENST00000536295 CCDC88AQ3V6T2 1871 aa18.63■□□□□ 0.57
RTN3P1-201ENST00000536295 COPS6Q7L5N1 327 aa18.63■□□□□ 0.57
RTN3P1-201ENST00000536295 ZNF34Q8IZ26 560 aa18.63■□□□□ 0.57
RTN3P1-201ENST00000536295 XAGE3Q8WTP9 111 aa18.63■□□□□ 0.57
RTN3P1-201ENST00000536295 TNRC6CQ9HCJ0 1690 aaKnown RBP18.63■□□□□ 0.57
RTN3P1-201ENST00000536295 FER1L6Q2WGJ9 1857 aa18.63■□□□□ 0.57
RTN3P1-201ENST00000536295 GLTPD2A6NH11 291 aa18.62■□□□□ 0.57
RTN3P1-201ENST00000536295 CCDC184Q52MB2 194 aa18.62■□□□□ 0.57
RTN3P1-201ENST00000536295 CCDC93Q567U6 631 aa18.62■□□□□ 0.57
RTN3P1-201ENST00000536295 OLFM4Q6UX06 510 aa18.62■□□□□ 0.57
RTN3P1-201ENST00000536295 CFAP44Q96MT7 982 aa18.62■□□□□ 0.57
RTN3P1-201ENST00000536295 ARFGEF2Q9Y6D5 1785 aa18.62■□□□□ 0.57
RTN3P1-201ENST00000536295 LTBP3Q9NS15 1303 aa18.61■□□□□ 0.57
RTN3P1-201ENST00000536295 HDGFL1Q5TGJ6 251 aa18.61■□□□□ 0.57
RTN3P1-201ENST00000536295 C7orf43Q8WVR3 580 aa18.61■□□□□ 0.57
RTN3P1-201ENST00000536295 DDX21Q9NR30 783 aaKnown RBP eCLIP18.61■□□□□ 0.57
RTN3P1-201ENST00000536295 MBIPQ9NS73 344 aa18.61■□□□□ 0.57
RTN3P1-201ENST00000536295 CHPF2Q9P2E5 772 aa18.61■□□□□ 0.57
RTN3P1-201ENST00000536295 IBTKQ9P2D0 1353 aaPredicted RBP18.6■□□□□ 0.57
RTN3P1-201ENST00000536295 NTSR2O95665 410 aa18.6■□□□□ 0.57
RTN3P1-201ENST00000536295 ALDH1B1P30837 517 aa18.6■□□□□ 0.57
RTN3P1-201ENST00000536295 PARP10Q53GL7 1025 aa18.6■□□□□ 0.57
RTN3P1-201ENST00000536295 PPP1R42Q7Z4L9 355 aa18.6■□□□□ 0.57
RTN3P1-201ENST00000536295 RBM46Q8TBY0 533 aaKnown RBP18.6■□□□□ 0.57
RTN3P1-201ENST00000536295 RPGRQ92834 1020 aaKnown RBP18.6■□□□□ 0.57
RTN3P1-201ENST00000536295 ZNF316A6NFI3 1004 aaPredicted RBP18.59■□□□□ 0.57
RTN3P1-201ENST00000536295 CRY2Q49AN0 593 aa18.59■□□□□ 0.57
RTN3P1-201ENST00000536295 DUSP27Q5VZP5 1158 aa18.58■□□□□ 0.56
RTN3P1-201ENST00000536295 DPY19L2Q6NUT2 758 aa18.58■□□□□ 0.56
RTN3P1-201ENST00000536295 UTP14AQ9BVJ6 771 aaKnown RBP18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms