RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 EXOSC9Q06265 439 aaKnown RBP14.65□□□□□ -0.06
TNFRSF1A-208ENST00000536194 HLFQ16534 295 aa14.65□□□□□ -0.06
TNFRSF1A-208ENST00000536194 NPM2Q86SE8 214 aaKnown RBP14.65□□□□□ -0.06
TNFRSF1A-208ENST00000536194 CDCA7LQ96GN5 454 aa14.65□□□□□ -0.06
TNFRSF1A-208ENST00000536194 C10orf71Q711Q0 1435 aa14.65□□□□□ -0.06
TNFRSF1A-208ENST00000536194 MAP3K15Q6ZN16 1313 aa14.65□□□□□ -0.06
TNFRSF1A-208ENST00000536194 ANKRD31Q8N7Z5 1873 aa14.64□□□□□ -0.07
TNFRSF1A-208ENST00000536194 GOLGA2Q08379 1002 aa14.64□□□□□ -0.07
TNFRSF1A-208ENST00000536194 TWISTNBQ3B726 338 aaPredicted RBP14.64□□□□□ -0.07
TNFRSF1A-208ENST00000536194 BICDL1Q6ZP65 573 aa14.64□□□□□ -0.07
TNFRSF1A-208ENST00000536194 KLHL34Q8N239 644 aa14.64□□□□□ -0.07
TNFRSF1A-208ENST00000536194 NLGN2Q8NFZ4 835 aa14.64□□□□□ -0.07
TNFRSF1A-208ENST00000536194 MYH16Q9H6N6 1097 aa14.64□□□□□ -0.07
TNFRSF1A-208ENST00000536194 CACNA1FO60840 1977 aa14.64□□□□□ -0.07
TNFRSF1A-208ENST00000536194 SLFN5Q08AF3 891 aa14.63□□□□□ -0.07
TNFRSF1A-208ENST00000536194 COPS6Q7L5N1 327 aa14.63□□□□□ -0.07
TNFRSF1A-208ENST00000536194 XAGE3Q8WTP9 111 aa14.63□□□□□ -0.07
TNFRSF1A-208ENST00000536194 ZBTB3Q9H5J0 574 aa14.63□□□□□ -0.07
TNFRSF1A-208ENST00000536194 DBF4Q9UBU7 674 aaPredicted RBP14.63□□□□□ -0.07
TNFRSF1A-208ENST00000536194 PARP3Q9Y6F1 533 aa14.63□□□□□ -0.07
TNFRSF1A-208ENST00000536194 BRCA1P38398 1863 aaKnown RBP14.63□□□□□ -0.07
TNFRSF1A-208ENST00000536194 ERVV-1B6SEH8 477 aa14.62□□□□□ -0.07
TNFRSF1A-208ENST00000536194 TCERG1O14776 1098 aaKnown RBP14.62□□□□□ -0.07
TNFRSF1A-208ENST00000536194 RGL2O15211 777 aa14.62□□□□□ -0.07
TNFRSF1A-208ENST00000536194 VAMP4O75379 141 aa14.62□□□□□ -0.07
TNFRSF1A-208ENST00000536194 AIMP1Q12904 312 aaKnown RBP14.62□□□□□ -0.07
TNFRSF1A-208ENST00000536194 CLEC4GQ6UXB4 293 aa14.62□□□□□ -0.07
TNFRSF1A-208ENST00000536194 CARMIL3Q8ND23 1372 aa14.61□□□□□ -0.07
TNFRSF1A-208ENST00000536194 ATP10DQ9P241 1426 aa14.61□□□□□ -0.07
TNFRSF1A-208ENST00000536194 E9PSI1 815 aa14.61□□□□□ -0.07
TNFRSF1A-208ENST00000536194 SERPINB2P05120 415 aa14.61□□□□□ -0.07
TNFRSF1A-208ENST00000536194 HNRNPUQ00839 825 aaKnown RBP eCLIP14.61□□□□□ -0.07
TNFRSF1A-208ENST00000536194 CCDC30Q5VVM6 783 aa14.61□□□□□ -0.07
TNFRSF1A-208ENST00000536194 KIF6Q6ZMV9 814 aa14.61□□□□□ -0.07
TNFRSF1A-208ENST00000536194 TRMT2AQ8IZ69 625 aaKnown RBP14.61□□□□□ -0.07
TNFRSF1A-208ENST00000536194 PHAXQ9H814 394 aaKnown RBP14.61□□□□□ -0.07
TNFRSF1A-208ENST00000536194 CD2APQ9Y5K6 639 aa14.61□□□□□ -0.07
TNFRSF1A-208ENST00000536194 PXDNLA1KZ92 1463 aa14.61□□□□□ -0.07
TNFRSF1A-208ENST00000536194 HYPKQ9NX55 129 aa14.6□□□□□ -0.07
TNFRSF1A-208ENST00000536194 ZNF652Q9Y2D9 606 aa14.6□□□□□ -0.07
TNFRSF1A-208ENST00000536194 UBN2Q6ZU65 1347 aa14.6□□□□□ -0.07
TNFRSF1A-208ENST00000536194 DLEC1Q9Y238 1755 aa14.6□□□□□ -0.07
TNFRSF1A-208ENST00000536194 COL11A2P13942 1736 aaPredicted RBP14.59□□□□□ -0.07
TNFRSF1A-208ENST00000536194 GIGYF2Q6Y7W6 1299 aaKnown RBP14.59□□□□□ -0.07
TNFRSF1A-208ENST00000536194 SETDB2Q96T68 719 aa14.59□□□□□ -0.07
TNFRSF1A-208ENST00000536194 PRR5LQ6MZQ0 368 aa14.58□□□□□ -0.08
TNFRSF1A-208ENST00000536194 ZNF34Q8IZ26 560 aa14.58□□□□□ -0.08
TNFRSF1A-208ENST00000536194 CCDC24Q8N4L8 307 aa14.58□□□□□ -0.08
TNFRSF1A-208ENST00000536194 NIP7Q9Y221 180 aaKnown RBP eCLIP14.58□□□□□ -0.08
TNFRSF1A-208ENST00000536194 TNRC6CQ9HCJ0 1690 aaKnown RBP14.58□□□□□ -0.08
TNFRSF1A-208ENST00000536194 GPTP24298 496 aa14.57□□□□□ -0.08
TNFRSF1A-208ENST00000536194 G2E3Q7L622 706 aa14.57□□□□□ -0.08
TNFRSF1A-208ENST00000536194 PLBD2Q8NHP8 589 aa14.57□□□□□ -0.08
TNFRSF1A-208ENST00000536194 ANKRD13DQ6ZTN6 518 aa14.56□□□□□ -0.08
TNFRSF1A-208ENST00000536194 FAM177BA6PVY3 158 aa14.55□□□□□ -0.08
TNFRSF1A-208ENST00000536194 SLC4A2P04920 1241 aa14.55□□□□□ -0.08
TNFRSF1A-208ENST00000536194 KCNA3P22001 575 aa14.55□□□□□ -0.08
TNFRSF1A-208ENST00000536194 TGFB2P61812 414 aa14.55□□□□□ -0.08
TNFRSF1A-208ENST00000536194 SUSD4Q5VX71 490 aa14.55□□□□□ -0.08
TNFRSF1A-208ENST00000536194 CNBD1Q8NA66 436 aa14.55□□□□□ -0.08
TNFRSF1A-208ENST00000536194 STK31Q9BXU1 1019 aa14.55□□□□□ -0.08
TNFRSF1A-208ENST00000536194 CHMP4AQ9BY43 222 aa14.55□□□□□ -0.08
TNFRSF1A-208ENST00000536194 ADCY9O60503 1353 aa14.55□□□□□ -0.08
TNFRSF1A-208ENST00000536194 CACNA1SQ13698 1873 aa14.55□□□□□ -0.08
TNFRSF1A-208ENST00000536194 A0A0G2JLW4 131 aa14.54□□□□□ -0.08
TNFRSF1A-208ENST00000536194 DPEP1P16444 411 aa14.54□□□□□ -0.08
TNFRSF1A-208ENST00000536194 CHRNA5P30532 468 aa14.54□□□□□ -0.08
TNFRSF1A-208ENST00000536194 TCIRG1Q13488 830 aa14.54□□□□□ -0.08
TNFRSF1A-208ENST00000536194 NBPF5PQ86XG9 351 aaPredicted RBP14.54□□□□□ -0.08
TNFRSF1A-208ENST00000536194 WWC3Q9ULE0 1092 aa14.54□□□□□ -0.08
TNFRSF1A-208ENST00000536194 ZBED9Q6R2W3 1325 aa14.54□□□□□ -0.08
TNFRSF1A-208ENST00000536194 ABCC12Q96J65 1359 aa14.54□□□□□ -0.08
TNFRSF1A-208ENST00000536194 IBTKQ9P2D0 1353 aaPredicted RBP14.54□□□□□ -0.08
TNFRSF1A-208ENST00000536194 LAMB2P55268 1798 aa14.54□□□□□ -0.08
TNFRSF1A-208ENST00000536194 ARFGEF1Q9Y6D6 1849 aa14.53□□□□□ -0.08
TNFRSF1A-208ENST00000536194 DDX60Q8IY21 1712 aaKnown RBP14.53□□□□□ -0.08
TNFRSF1A-208ENST00000536194 NTSR2O95665 410 aa14.53□□□□□ -0.08
TNFRSF1A-208ENST00000536194 NUTM1Q86Y26 1132 aa14.53□□□□□ -0.08
TNFRSF1A-208ENST00000536194 ATP5J2-PTCD1G3V325 749 aa14.52□□□□□ -0.09
TNFRSF1A-208ENST00000536194 YBX3P16989 372 aaKnown RBP eCLIP14.52□□□□□ -0.09
TNFRSF1A-208ENST00000536194 FLIIQ13045 1269 aa14.52□□□□□ -0.09
TNFRSF1A-208ENST00000536194 HSP90AB3PQ58FF7 597 aa14.52□□□□□ -0.09
TNFRSF1A-208ENST00000536194 RIC3Q7Z5B4 369 aa14.52□□□□□ -0.09
TNFRSF1A-208ENST00000536194 NLRP10Q86W26 655 aa14.52□□□□□ -0.09
TNFRSF1A-208ENST00000536194 ZNF428Q96B54 188 aa14.52□□□□□ -0.09
TNFRSF1A-208ENST00000536194 ISCA1Q9BUE6 129 aa14.52□□□□□ -0.09
TNFRSF1A-208ENST00000536194 PI4KAP2A4QPH2 592 aa14.51□□□□□ -0.09
TNFRSF1A-208ENST00000536194 ST5P78524 1137 aa14.51□□□□□ -0.09
TNFRSF1A-208ENST00000536194 ERFEQ4G0M1 354 aa14.51□□□□□ -0.09
TNFRSF1A-208ENST00000536194 PARP10Q53GL7 1025 aa14.51□□□□□ -0.09
TNFRSF1A-208ENST00000536194 KSR2Q6VAB6 950 aa14.51□□□□□ -0.09
TNFRSF1A-208ENST00000536194 TPTE2Q6XPS3 522 aa14.51□□□□□ -0.09
TNFRSF1A-208ENST00000536194 PI4KAP1Q8N8J0 262 aa14.51□□□□□ -0.09
TNFRSF1A-208ENST00000536194 BRIP1Q9BX63 1249 aa14.51□□□□□ -0.09
TNFRSF1A-208ENST00000536194 MAP3K2Q9Y2U5 619 aa14.51□□□□□ -0.09
TNFRSF1A-208ENST00000536194 NPHP1O15259 732 aa14.5□□□□□ -0.09
TNFRSF1A-208ENST00000536194 DDX58O95786 925 aaKnown RBP14.5□□□□□ -0.09
TNFRSF1A-208ENST00000536194 SYNE4Q8N205 404 aa14.5□□□□□ -0.09
TNFRSF1A-208ENST00000536194 SSH1Q8WYL5 1049 aa14.5□□□□□ -0.09
TNFRSF1A-208ENST00000536194 MYD88Q99836 296 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms