RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 SHROOM2Q13796 1616 aa7.38□□□□□ -1.23
YBX3-205ENST00000536107 ADCY10Q96PN6 1610 aa7.38□□□□□ -1.23
YBX3-205ENST00000536107 PCF11O94913 1555 aaKnown RBP7.37□□□□□ -1.23
YBX3-205ENST00000536107 TEX14Q8IWB6 1497 aa7.37□□□□□ -1.23
YBX3-205ENST00000536107 ARID4BQ4LE39 1312 aaPredicted RBP7.37□□□□□ -1.23
YBX3-205ENST00000536107 MYCP01106 439 aaPredicted RBP7.37□□□□□ -1.23
YBX3-205ENST00000536107 H2AFB1P0C5Y9 115 aa7.37□□□□□ -1.23
YBX3-205ENST00000536107 H2AFB2P0C5Z0 115 aa7.37□□□□□ -1.23
YBX3-205ENST00000536107 MAPTP10636 758 aaKnown RBP7.37□□□□□ -1.23
YBX3-205ENST00000536107 ZNF468Q5VIY5 522 aaPredicted RBP7.37□□□□□ -1.23
YBX3-205ENST00000536107 TBC1D9Q6ZT07 1266 aa7.37□□□□□ -1.23
YBX3-205ENST00000536107 NACC1Q96RE7 527 aa7.37□□□□□ -1.23
YBX3-205ENST00000536107 HYAL3O43820 417 aaPredicted RBP7.36□□□□□ -1.23
YBX3-205ENST00000536107 CD33P20138 364 aa7.36□□□□□ -1.23
YBX3-205ENST00000536107 RFC5P40937 340 aa7.36□□□□□ -1.23
YBX3-205ENST00000536107 SLC24A3Q9HC58 644 aa7.36□□□□□ -1.23
YBX3-205ENST00000536107 ASXL2Q76L83 1435 aa7.35□□□□□ -1.23
YBX3-205ENST00000536107 PBRM1Q86U86 1689 aa7.35□□□□□ -1.23
YBX3-205ENST00000536107 ATP4AP20648 1035 aa7.35□□□□□ -1.23
YBX3-205ENST00000536107 NR1H3Q13133 447 aa7.35□□□□□ -1.23
YBX3-205ENST00000536107 ZNF330Q9Y3S2 320 aaPredicted RBP7.35□□□□□ -1.23
YBX3-205ENST00000536107 PLB1Q6P1J6 1458 aa7.35□□□□□ -1.23
YBX3-205ENST00000536107 FHAD1B1AJZ9 1412 aa7.35□□□□□ -1.23
YBX3-205ENST00000536107 ELOA3CA0A087WX78 387 aaPredicted RBP7.34□□□□□ -1.23
YBX3-205ENST00000536107 DCDC2BA2VCK2 349 aa7.34□□□□□ -1.23
YBX3-205ENST00000536107 ELOA3DA6NLF2 546 aaPredicted RBP7.34□□□□□ -1.23
YBX3-205ENST00000536107 PCBP4P57723 403 aaKnown RBP7.34□□□□□ -1.23
YBX3-205ENST00000536107 ELOA3BQ3SY89 546 aa7.34□□□□□ -1.23
YBX3-205ENST00000536107 ELOA3Q8NG57 546 aa7.34□□□□□ -1.23
YBX3-205ENST00000536107 MDFIQ99750 246 aa7.34□□□□□ -1.23
YBX3-205ENST00000536107 PLA2G4AP47712 749 aa7.33□□□□□ -1.24
YBX3-205ENST00000536107 DDRGK1Q96HY6 314 aa7.33□□□□□ -1.24
YBX3-205ENST00000536107 GJD4Q96KN9 370 aaPredicted RBP7.33□□□□□ -1.24
YBX3-205ENST00000536107 PRR12Q9ULL5 1215 aa7.33□□□□□ -1.24
YBX3-205ENST00000536107 KHNYNO15037 678 aaKnown RBP7.32□□□□□ -1.24
YBX3-205ENST00000536107 FAM157BP0CG42 384 aa7.32□□□□□ -1.24
YBX3-205ENST00000536107 ALAS2P22557 587 aa7.32□□□□□ -1.24
YBX3-205ENST00000536107 COL9A3Q14050 684 aaPredicted RBP7.32□□□□□ -1.24
YBX3-205ENST00000536107 TLR1Q15399 786 aa7.32□□□□□ -1.24
YBX3-205ENST00000536107 CDCA7Q9BWT1 371 aaPredicted RBP7.32□□□□□ -1.24
YBX3-205ENST00000536107 PTPRGP23470 1445 aa7.32□□□□□ -1.24
YBX3-205ENST00000536107 A0A1W2PNR3 127 aa7.31□□□□□ -1.24
YBX3-205ENST00000536107 GLI2P10070 1586 aa7.31□□□□□ -1.24
YBX3-205ENST00000536107 TRIM28Q13263 835 aaKnown RBP7.31□□□□□ -1.24
YBX3-205ENST00000536107 ETNK1Q9HBU6 452 aa7.31□□□□□ -1.24
YBX3-205ENST00000536107 PRDM6Q9NQX0 595 aa7.31□□□□□ -1.24
YBX3-205ENST00000536107 CUX1P39880 1505 aa7.31□□□□□ -1.24
YBX3-205ENST00000536107 ADAMTS12P58397 1594 aa7.3□□□□□ -1.24
YBX3-205ENST00000536107 FAM229AH3BQW9 127 aa7.3□□□□□ -1.24
YBX3-205ENST00000536107 TMEM259Q4ZIN3 620 aa7.3□□□□□ -1.24
YBX3-205ENST00000536107 CCDC85AQ96PX6 553 aaPredicted RBP7.3□□□□□ -1.24
YBX3-205ENST00000536107 PPRC1Q5VV67 1664 aaKnown RBP7.3□□□□□ -1.24
YBX3-205ENST00000536107 ABCA10Q8WWZ4 1543 aa7.3□□□□□ -1.24
YBX3-205ENST00000536107 LAMC2Q13753 1193 aa7.29□□□□□ -1.24
YBX3-205ENST00000536107 MCTP1Q6DN14 999 aa7.29□□□□□ -1.24
YBX3-205ENST00000536107 MARK1Q9P0L2 795 aa7.29□□□□□ -1.24
YBX3-205ENST00000536107 ABCC2Q92887 1545 aa7.28□□□□□ -1.24
YBX3-205ENST00000536107 KIF21BO75037 1637 aa7.28□□□□□ -1.24
YBX3-205ENST00000536107 ABCA5Q8WWZ7 1642 aa7.28□□□□□ -1.24
YBX3-205ENST00000536107 ADARB2-AS1A8MUL3 147 aa7.28□□□□□ -1.24
YBX3-205ENST00000536107 C9orf172C9J069 976 aa7.28□□□□□ -1.24
YBX3-205ENST00000536107 UBAP1LF5GYI3 381 aa7.28□□□□□ -1.24
YBX3-205ENST00000536107 GRIK4Q16099 956 aa7.28□□□□□ -1.24
YBX3-205ENST00000536107 ARSJQ5FYB0 599 aaPredicted RBP7.28□□□□□ -1.24
YBX3-205ENST00000536107 SAMD5Q5TGI4 173 aa7.28□□□□□ -1.24
YBX3-205ENST00000536107 AIDAQ96BJ3 306 aa7.28□□□□□ -1.24
YBX3-205ENST00000536107 NIFKQ9BYG3 293 aaKnown RBP7.28□□□□□ -1.24
YBX3-205ENST00000536107 KRTAP4-7Q9BYR0 210 aa7.28□□□□□ -1.24
YBX3-205ENST00000536107 FAM117AQ9C073 453 aa7.28□□□□□ -1.24
YBX3-205ENST00000536107 EPRSP07814 1512 aaKnown RBP7.27□□□□□ -1.25
YBX3-205ENST00000536107 M0R082 166 aa7.27□□□□□ -1.25
YBX3-205ENST00000536107 EFSO43281 561 aa7.27□□□□□ -1.25
YBX3-205ENST00000536107 ADGRE1Q14246 886 aa7.27□□□□□ -1.25
YBX3-205ENST00000536107 SYT9Q86SS6 491 aa7.27□□□□□ -1.25
YBX3-205ENST00000536107 ZNF417Q8TAU3 575 aa7.27□□□□□ -1.25
YBX3-205ENST00000536107 ZNF587Q96SQ5 575 aaPredicted RBP7.27□□□□□ -1.25
YBX3-205ENST00000536107 CEP126Q9P2H0 1117 aa7.27□□□□□ -1.25
YBX3-205ENST00000536107 SIN3BO75182 1162 aa7.26□□□□□ -1.25
YBX3-205ENST00000536107 STAU1O95793 577 aaKnown RBP7.26□□□□□ -1.25
YBX3-205ENST00000536107 USP4Q13107 963 aa7.26□□□□□ -1.25
YBX3-205ENST00000536107 MBTPS1Q14703 1052 aa7.26□□□□□ -1.25
YBX3-205ENST00000536107 NBPF1Q3BBV0 1214 aa7.26□□□□□ -1.25
YBX3-205ENST00000536107 STRN4Q9NRL3 753 aa7.26□□□□□ -1.25
YBX3-205ENST00000536107 ZDHHC3Q9NYG2 299 aa7.26□□□□□ -1.25
YBX3-205ENST00000536107 NID1P14543 1247 aa7.25□□□□□ -1.25
YBX3-205ENST00000536107 LCE1DQ5T752 114 aa7.25□□□□□ -1.25
YBX3-205ENST00000536107 TXNRD3Q86VQ6 643 aa7.25□□□□□ -1.25
YBX3-205ENST00000536107 ZIC5Q96T25 663 aa7.25□□□□□ -1.25
YBX3-205ENST00000536107 STARD13Q9Y3M8 1113 aa7.25□□□□□ -1.25
YBX3-205ENST00000536107 ARID1BQ8NFD5 2236 aaPredicted RBP7.25□□□□□ -1.25
YBX3-205ENST00000536107 PAX4O43316 350 aa7.24□□□□□ -1.25
YBX3-205ENST00000536107 COBLO75128 1261 aa7.24□□□□□ -1.25
YBX3-205ENST00000536107 ELNP15502 786 aa7.24□□□□□ -1.25
YBX3-205ENST00000536107 TATP17735 454 aaPredicted RBP7.24□□□□□ -1.25
YBX3-205ENST00000536107 TXKP42681 527 aa7.24□□□□□ -1.25
YBX3-205ENST00000536107 MICALL1Q8N3F8 863 aa7.24□□□□□ -1.25
YBX3-205ENST00000536107 TNFRSF25Q93038 417 aa7.24□□□□□ -1.25
YBX3-205ENST00000536107 KDM4CQ9H3R0 1056 aa7.24□□□□□ -1.25
YBX3-205ENST00000536107 GJA3Q9Y6H8 435 aa7.24□□□□□ -1.25
YBX3-205ENST00000536107 CD109Q6YHK3 1445 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms