RNA–Protein interactions for RNA: ENST00000536003.5

PAAF1-207, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-207ENST00000536003 BRIP1Q9BX63 1249 aa20.27■□□□□ 0.83
PAAF1-207ENST00000536003 PNNQ9H307 717 aaKnown RBP20.27■□□□□ 0.83
PAAF1-207ENST00000536003 RRP7AQ9Y3A4 280 aaKnown RBP20.27■□□□□ 0.83
PAAF1-207ENST00000536003 TMPOP42166 694 aaKnown RBP20.25■□□□□ 0.83
PAAF1-207ENST00000536003 HLFQ16534 295 aa20.25■□□□□ 0.83
PAAF1-207ENST00000536003 CLEC4GQ6UXB4 293 aa20.25■□□□□ 0.83
PAAF1-207ENST00000536003 NMRK2Q9NPI5 230 aa20.25■□□□□ 0.83
PAAF1-207ENST00000536003 PDE6BP35913 854 aa20.24■□□□□ 0.83
PAAF1-207ENST00000536003 NFKBIEO00221 500 aa20.24■□□□□ 0.83
PAAF1-207ENST00000536003 NBPF5PQ86XG9 351 aaPredicted RBP20.24■□□□□ 0.83
PAAF1-207ENST00000536003 NGEFQ8N5V2 710 aa20.24■□□□□ 0.83
PAAF1-207ENST00000536003 ZNF622Q969S3 477 aaKnown RBP eCLIP20.24■□□□□ 0.832e-7■■■□□ 16.3
PAAF1-207ENST00000536003 ZNF652Q9Y2D9 606 aa20.24■□□□□ 0.83
PAAF1-207ENST00000536003 DICER1Q9UPY3 1922 aaKnown RBP20.23■□□□□ 0.83
PAAF1-207ENST00000536003 NPHP1O15259 732 aa20.23■□□□□ 0.83
PAAF1-207ENST00000536003 ST5P78524 1137 aa20.23■□□□□ 0.83
PAAF1-207ENST00000536003 PRKRIP1Q9H875 184 aaPredicted RBP20.23■□□□□ 0.83
PAAF1-207ENST00000536003 TSPYL4Q9UJ04 414 aa20.23■□□□□ 0.83
PAAF1-207ENST00000536003 NIP7Q9Y221 180 aaKnown RBP eCLIP20.23■□□□□ 0.83
PAAF1-207ENST00000536003 ZNF219Q9P2Y4 722 aaPredicted RBP20.22■□□□□ 0.83
PAAF1-207ENST00000536003 MYL6BP14649 208 aa20.21■□□□□ 0.83
PAAF1-207ENST00000536003 NEUROD2Q15784 382 aa20.21■□□□□ 0.83
PAAF1-207ENST00000536003 TTLL7Q6ZT98 887 aa20.21■□□□□ 0.83
PAAF1-207ENST00000536003 FAM177BA6PVY3 158 aa20.2■□□□□ 0.82
PAAF1-207ENST00000536003 SRGNP10124 158 aa20.2■□□□□ 0.82
PAAF1-207ENST00000536003 ABCC12Q96J65 1359 aa20.2■□□□□ 0.82
PAAF1-207ENST00000536003 C21orf2O43822 256 aa20.2■□□□□ 0.82
PAAF1-207ENST00000536003 ADAMTS8Q9UP79 889 aa20.2■□□□□ 0.82
PAAF1-207ENST00000536003 ANKRD36CQ5JPF3 1778 aa20.19■□□□□ 0.82
PAAF1-207ENST00000536003 MAP3K15Q6ZN16 1313 aa20.19■□□□□ 0.82
PAAF1-207ENST00000536003 RGL2O15211 777 aa20.19■□□□□ 0.82
PAAF1-207ENST00000536003 WDR43Q15061 677 aaKnown RBP eCLIP20.19■□□□□ 0.82
PAAF1-207ENST00000536003 TRIM35Q9UPQ4 493 aa20.19■□□□□ 0.82
PAAF1-207ENST00000536003 LMNB1P20700 586 aa20.18■□□□□ 0.82
PAAF1-207ENST00000536003 PRPF40BQ6NWY9 871 aaKnown RBP20.18■□□□□ 0.82
PAAF1-207ENST00000536003 LRP10Q7Z4F1 713 aa20.18■□□□□ 0.82
PAAF1-207ENST00000536003 RUNDC1Q96C34 613 aa20.18■□□□□ 0.82
PAAF1-207ENST00000536003 ZBTB3Q9H5J0 574 aa20.18■□□□□ 0.82
PAAF1-207ENST00000536003 PDZRN3Q9UPQ7 1066 aa20.18■□□□□ 0.82
PAAF1-207ENST00000536003 UBN2Q6ZU65 1347 aa20.17■□□□□ 0.82
PAAF1-207ENST00000536003 LMOD3Q0VAK6 560 aa20.17■□□□□ 0.82
PAAF1-207ENST00000536003 PROSER3Q2NL68 480 aa20.17■□□□□ 0.82
PAAF1-207ENST00000536003 STYK1Q6J9G0 422 aa20.17■□□□□ 0.82
PAAF1-207ENST00000536003 ANXA1P04083 346 aa20.16■□□□□ 0.82
PAAF1-207ENST00000536003 PDIA6Q15084 440 aa20.16■□□□□ 0.82
PAAF1-207ENST00000536003 KRT24Q2M2I5 525 aa20.16■□□□□ 0.82
PAAF1-207ENST00000536003 MASTLQ96GX5 879 aa20.16■□□□□ 0.82
PAAF1-207ENST00000536003 HSPA6P17066 643 aa20.16■□□□□ 0.82
PAAF1-207ENST00000536003 ERBB4Q15303 1308 aa20.15■□□□□ 0.82
PAAF1-207ENST00000536003 KLRG2A4D1S0 409 aaPredicted RBP20.15■□□□□ 0.82
PAAF1-207ENST00000536003 ERVV-1B6SEH8 477 aa20.15■□□□□ 0.82
PAAF1-207ENST00000536003 EIF2S2P20042 333 aaKnown RBP20.15■□□□□ 0.82
PAAF1-207ENST00000536003 TPTE2Q6XPS3 522 aa20.15■□□□□ 0.82
PAAF1-207ENST00000536003 KIF6Q6ZMV9 814 aa20.15■□□□□ 0.82
PAAF1-207ENST00000536003 NUTM1Q86Y26 1132 aa20.15■□□□□ 0.82
PAAF1-207ENST00000536003 KDM2BQ8NHM5 1336 aa20.14■□□□□ 0.82
PAAF1-207ENST00000536003 ZC3H4Q9UPT8 1303 aaKnown RBP20.14■□□□□ 0.82
PAAF1-207ENST00000536003 GPTP24298 496 aa20.14■□□□□ 0.81
PAAF1-207ENST00000536003 CNKSR1Q969H4 720 aa20.14■□□□□ 0.81
PAAF1-207ENST00000536003 BABAM1Q9NWV8 329 aa20.14■□□□□ 0.81
PAAF1-207ENST00000536003 TOMM70O94826 608 aa20.13■□□□□ 0.81
PAAF1-207ENST00000536003 NECTIN2Q92692 538 aa20.13■□□□□ 0.81
PAAF1-207ENST00000536003 LAMB2P55268 1798 aa20.13■□□□□ 0.81
PAAF1-207ENST00000536003 OLFM4Q6UX06 510 aa20.13■□□□□ 0.81
PAAF1-207ENST00000536003 WDR90Q96KV7 1748 aa20.12■□□□□ 0.81
PAAF1-207ENST00000536003 CHL1O00533 1208 aa20.12■□□□□ 0.81
PAAF1-207ENST00000536003 NPR1P16066 1061 aa20.12■□□□□ 0.81
PAAF1-207ENST00000536003 RRAGCQ9HB90 399 aa20.12■□□□□ 0.81
PAAF1-207ENST00000536003 LAS1LQ9Y4W2 734 aaKnown RBP20.12■□□□□ 0.81
PAAF1-207ENST00000536003 IBTKQ9P2D0 1353 aaPredicted RBP20.12■□□□□ 0.81
PAAF1-207ENST00000536003 LTBP3Q9NS15 1303 aa20.11■□□□□ 0.81
PAAF1-207ENST00000536003 ERFEQ4G0M1 354 aa20.11■□□□□ 0.81
PAAF1-207ENST00000536003 C7orf43Q8WVR3 580 aa20.11■□□□□ 0.81
PAAF1-207ENST00000536003 TAOK3Q9H2K8 898 aa20.11■□□□□ 0.81
PAAF1-207ENST00000536003 PCNTO95613 3336 aa20.1■□□□□ 0.81
PAAF1-207ENST00000536003 SUSD4Q5VX71 490 aa20.1■□□□□ 0.81
PAAF1-207ENST00000536003 GIGYF2Q6Y7W6 1299 aaKnown RBP20.1■□□□□ 0.81
PAAF1-207ENST00000536003 ZNF34Q8IZ26 560 aa20.1■□□□□ 0.81
PAAF1-207ENST00000536003 RIC1Q4ADV7 1423 aa20.1■□□□□ 0.81
PAAF1-207ENST00000536003 GLTPD2A6NH11 291 aa20.09■□□□□ 0.81
PAAF1-207ENST00000536003 GTF2E1P29083 439 aaPredicted RBP20.09■□□□□ 0.81
PAAF1-207ENST00000536003 SLC51AQ86UW1 340 aa20.09■□□□□ 0.81
PAAF1-207ENST00000536003 SNED1Q8TER0 1413 aa20.09■□□□□ 0.81
PAAF1-207ENST00000536003 NTSR2O95665 410 aa20.09■□□□□ 0.81
PAAF1-207ENST00000536003 CRY2Q49AN0 593 aa20.09■□□□□ 0.81
PAAF1-207ENST00000536003 CCDC184Q52MB2 194 aa20.09■□□□□ 0.81
PAAF1-207ENST00000536003 C3orf67Q6ZVT6 689 aa20.08■□□□□ 0.8
PAAF1-207ENST00000536003 NYXQ9GZU5 481 aa20.08■□□□□ 0.8
PAAF1-207ENST00000536003 RBM46Q8TBY0 533 aaKnown RBP20.07■□□□□ 0.8
PAAF1-207ENST00000536003 APAF1O14727 1248 aa20.06■□□□□ 0.8
PAAF1-207ENST00000536003 XAGE3Q8WTP9 111 aa20.06■□□□□ 0.8
PAAF1-207ENST00000536003 CHPF2Q9P2E5 772 aa20.06■□□□□ 0.8
PAAF1-207ENST00000536003 AIMP1Q12904 312 aaKnown RBP20.05■□□□□ 0.8
PAAF1-207ENST00000536003 CCDC93Q567U6 631 aa20.05■□□□□ 0.8
PAAF1-207ENST00000536003 SOGA3Q5TF21 947 aa20.05■□□□□ 0.8
PAAF1-207ENST00000536003 COPS6Q7L5N1 327 aa20.05■□□□□ 0.8
PAAF1-207ENST00000536003 C16orf71Q8IYS4 520 aaPredicted RBP20.05■□□□□ 0.8
PAAF1-207ENST00000536003 MBIPQ9NS73 344 aa20.05■□□□□ 0.8
PAAF1-207ENST00000536003 DDX60Q8IY21 1712 aaKnown RBP20.05■□□□□ 0.8
PAAF1-207ENST00000536003 POTECB2RU33 542 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms