RNA–Protein interactions for RNA: ENST00000535900.5

UBE3B-205, Transcript of ubiquitin protein ligase E3B, human

TSL 5

Gene UBE3B, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3B-205	ENST00000535900	BCOR	Q6W2J9	1755 aa		13.86	□□□□□ -0.19
UBE3B-205	ENST00000535900	TNRC6C	Q9HCJ0	1690 aa	Known RBP	13.85	□□□□□ -0.19
UBE3B-205	ENST00000535900	KIF3C	O14782	793 aa		13.85	□□□□□ -0.19
UBE3B-205	ENST00000535900	HSPA6	P17066	643 aa		13.85	□□□□□ -0.19
UBE3B-205	ENST00000535900	KCNA3	P22001	575 aa		13.85	□□□□□ -0.19
UBE3B-205	ENST00000535900	EXOSC9	Q06265	439 aa	Known RBP	13.85	□□□□□ -0.19
UBE3B-205	ENST00000535900	NFIX	Q14938	502 aa		13.85	□□□□□ -0.19
UBE3B-205	ENST00000535900	C9orf131	Q5VYM1	1079 aa		13.85	□□□□□ -0.19
UBE3B-205	ENST00000535900	ZNF790	Q6PG37	636 aa		13.85	□□□□□ -0.19
UBE3B-205	ENST00000535900	ZNF496	Q96IT1	587 aa	Predicted RBP	13.85	□□□□□ -0.19
UBE3B-205	ENST00000535900	TIAM2	Q8IVF5	1701 aa		13.84	□□□□□ -0.19
UBE3B-205	ENST00000535900		A0A087WZG4	1122 aa		13.84	□□□□□ -0.19
UBE3B-205	ENST00000535900	TM4SF1	P30408	202 aa		13.84	□□□□□ -0.19
UBE3B-205	ENST00000535900	ALDH1L2	Q3SY69	923 aa		13.84	□□□□□ -0.19
UBE3B-205	ENST00000535900	ERICH6B	Q5W0A0	696 aa		13.84	□□□□□ -0.19
UBE3B-205	ENST00000535900	NPM2	Q86SE8	214 aa	Known RBP	13.84	□□□□□ -0.19
UBE3B-205	ENST00000535900	RNF123	Q5XPI4	1314 aa		13.84	□□□□□ -0.19
UBE3B-205	ENST00000535900	CARMIL3	Q8ND23	1372 aa		13.83	□□□□□ -0.19
UBE3B-205	ENST00000535900	KDM3B	Q7LBC6	1761 aa		13.83	□□□□□ -0.19
UBE3B-205	ENST00000535900	SERPINB2	P05120	415 aa		13.83	□□□□□ -0.2
UBE3B-205	ENST00000535900	NEFL	P07196	543 aa		13.83	□□□□□ -0.2
UBE3B-205	ENST00000535900	BICDL1	Q6ZP65	573 aa		13.83	□□□□□ -0.2
UBE3B-205	ENST00000535900	FMNL2	Q96PY5	1086 aa		13.83	□□□□□ -0.2
UBE3B-205	ENST00000535900	BCL2L12	Q9HB09	334 aa		13.83	□□□□□ -0.2
UBE3B-205	ENST00000535900	RNF181	Q9P0P0	153 aa		13.83	□□□□□ -0.2
UBE3B-205	ENST00000535900	COL11A2	P13942	1736 aa	Predicted RBP	13.83	□□□□□ -0.2
UBE3B-205	ENST00000535900	VAMP4	O75379	141 aa		13.82	□□□□□ -0.2
UBE3B-205	ENST00000535900	BRPF1	P55201	1214 aa	Predicted RBP	13.82	□□□□□ -0.2
UBE3B-205	ENST00000535900	EIF4A1	P60842	406 aa	Known RBP	13.82	□□□□□ -0.2
UBE3B-205	ENST00000535900	TWISTNB	Q3B726	338 aa	Predicted RBP	13.82	□□□□□ -0.2
UBE3B-205	ENST00000535900	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	13.82	□□□□□ -0.2
UBE3B-205	ENST00000535900	TEX13A	Q9BXU3	409 aa	Predicted RBP	13.82	□□□□□ -0.2
UBE3B-205	ENST00000535900	NMRK2	Q9NPI5	230 aa		13.82	□□□□□ -0.2
UBE3B-205	ENST00000535900	GTF3C3	Q9Y5Q9	886 aa		13.82	□□□□□ -0.2
UBE3B-205	ENST00000535900	ANKRD31	Q8N7Z5	1873 aa		13.82	□□□□□ -0.2
UBE3B-205	ENST00000535900	SBF1	O95248	1867 aa		13.81	□□□□□ -0.2
UBE3B-205	ENST00000535900	RARS	P54136	660 aa	Known RBP	13.81	□□□□□ -0.2
UBE3B-205	ENST00000535900	EIF5	P55010	431 aa	Known RBP	13.81	□□□□□ -0.2
UBE3B-205	ENST00000535900	MIS18A	Q9NYP9	233 aa		13.81	□□□□□ -0.2
UBE3B-205	ENST00000535900	LAMB4	A4D0S4	1761 aa		13.81	□□□□□ -0.2
UBE3B-205	ENST00000535900	CACNA1F	O60840	1977 aa		13.8	□□□□□ -0.2
UBE3B-205	ENST00000535900	NPHP1	O15259	732 aa		13.8	□□□□□ -0.2
UBE3B-205	ENST00000535900	TOMM70	O94826	608 aa		13.8	□□□□□ -0.2
UBE3B-205	ENST00000535900	RASSF7	Q02833	373 aa		13.8	□□□□□ -0.2
UBE3B-205	ENST00000535900	C2CD5	Q86YS7	1000 aa		13.8	□□□□□ -0.2
UBE3B-205	ENST00000535900	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.8	□□□□□ -0.2
UBE3B-205	ENST00000535900	C8orf58	Q8NAV2	365 aa		13.8	□□□□□ -0.2
UBE3B-205	ENST00000535900	KDM2B	Q8NHM5	1336 aa		13.8	□□□□□ -0.2
UBE3B-205	ENST00000535900	WDR90	Q96KV7	1748 aa		13.79	□□□□□ -0.2
UBE3B-205	ENST00000535900	CACNA1S	Q13698	1873 aa		13.79	□□□□□ -0.2
UBE3B-205	ENST00000535900	IL6ST	P40189	918 aa	Predicted RBP	13.79	□□□□□ -0.2
UBE3B-205	ENST00000535900		H0YIN7	160 aa		13.78	□□□□□ -0.2
UBE3B-205	ENST00000535900	SNRPA1	P09661	255 aa	Known RBP	13.78	□□□□□ -0.2
UBE3B-205	ENST00000535900	CCDC30	Q5VVM6	783 aa		13.78	□□□□□ -0.2
UBE3B-205	ENST00000535900	TBC1D9B	Q66K14	1250 aa		13.78	□□□□□ -0.2
UBE3B-205	ENST00000535900	TTLL6	Q8N841	843 aa		13.78	□□□□□ -0.2
UBE3B-205	ENST00000535900	TBC1D2B	Q9UPU7	963 aa		13.78	□□□□□ -0.2
UBE3B-205	ENST00000535900	SUPT16H	Q9Y5B9	1047 aa	Known RBP	13.78	□□□□□ -0.2
UBE3B-205	ENST00000535900	KIF16B	Q96L93	1317 aa		13.78	□□□□□ -0.2
UBE3B-205	ENST00000535900	IPO8	O15397	1037 aa	Known RBP	13.77	□□□□□ -0.21
UBE3B-205	ENST00000535900	KCNQ3	O43525	872 aa		13.77	□□□□□ -0.21
UBE3B-205	ENST00000535900	A1BG	P04217	495 aa		13.77	□□□□□ -0.21
UBE3B-205	ENST00000535900	MS4A1	P11836	297 aa		13.77	□□□□□ -0.21
UBE3B-205	ENST00000535900	TSPYL6	Q8N831	410 aa		13.77	□□□□□ -0.21
UBE3B-205	ENST00000535900	CNBD1	Q8NA66	436 aa		13.77	□□□□□ -0.21
UBE3B-205	ENST00000535900	ZC3H4	Q9UPT8	1303 aa	Known RBP	13.77	□□□□□ -0.21
UBE3B-205	ENST00000535900	ARFGEF2	Q9Y6D5	1785 aa		13.77	□□□□□ -0.21
UBE3B-205	ENST00000535900	APLP1	P51693	650 aa		13.76	□□□□□ -0.21
UBE3B-205	ENST00000535900	ST5	P78524	1137 aa		13.76	□□□□□ -0.21
UBE3B-205	ENST00000535900	DZIP3	Q86Y13	1208 aa	Known RBP	13.76	□□□□□ -0.21
UBE3B-205	ENST00000535900	STK31	Q9BXU1	1019 aa		13.76	□□□□□ -0.21
UBE3B-205	ENST00000535900	SMC4	Q9NTJ3	1288 aa		13.76	□□□□□ -0.21
UBE3B-205	ENST00000535900	ERBB4	Q15303	1308 aa		13.75	□□□□□ -0.21
UBE3B-205	ENST00000535900	CAMTA2	O94983	1202 aa		13.75	□□□□□ -0.21
UBE3B-205	ENST00000535900	LMNB1	P20700	586 aa		13.75	□□□□□ -0.21
UBE3B-205	ENST00000535900	PDE6B	P35913	854 aa		13.75	□□□□□ -0.21
UBE3B-205	ENST00000535900	PIP4K2A	P48426	406 aa	Predicted RBP	13.75	□□□□□ -0.21
UBE3B-205	ENST00000535900	RRP1	P56182	461 aa	Known RBP	13.75	□□□□□ -0.21
UBE3B-205	ENST00000535900	PRR5L	Q6MZQ0	368 aa		13.75	□□□□□ -0.21
UBE3B-205	ENST00000535900	CCDC24	Q8N4L8	307 aa		13.75	□□□□□ -0.21
UBE3B-205	ENST00000535900	RBM46	Q8TBY0	533 aa	Known RBP	13.75	□□□□□ -0.21
UBE3B-205	ENST00000535900	SSH1	Q8WYL5	1049 aa		13.75	□□□□□ -0.21
UBE3B-205	ENST00000535900	ARHGAP45	Q92619	1136 aa		13.75	□□□□□ -0.21
UBE3B-205	ENST00000535900	ZNF622	Q969S3	477 aa	Known RBP eCLIP	13.75	□□□□□ -0.21
UBE3B-205	ENST00000535900	CCDC88A	Q3V6T2	1871 aa		13.75	□□□□□ -0.21
UBE3B-205	ENST00000535900	ELL2	O00472	640 aa	Predicted RBP	13.74	□□□□□ -0.21
UBE3B-205	ENST00000535900	HDGFL1	Q5TGJ6	251 aa		13.74	□□□□□ -0.21
UBE3B-205	ENST00000535900	SETDB2	Q96T68	719 aa		13.74	□□□□□ -0.21
UBE3B-205	ENST00000535900	BRIP1	Q9BX63	1249 aa		13.74	□□□□□ -0.21
UBE3B-205	ENST00000535900	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.74	□□□□□ -0.21
UBE3B-205	ENST00000535900	PDZRN3	Q9UPQ7	1066 aa		13.74	□□□□□ -0.21
UBE3B-205	ENST00000535900	ZNF652	Q9Y2D9	606 aa		13.74	□□□□□ -0.21
UBE3B-205	ENST00000535900	CEP350	Q5VT06	3117 aa		13.73	□□□□□ -0.21
UBE3B-205	ENST00000535900	PRAMEF22	A3QJZ6	481 aa		13.73	□□□□□ -0.21
UBE3B-205	ENST00000535900	PDE3A	Q14432	1141 aa		13.73	□□□□□ -0.21
UBE3B-205	ENST00000535900	KRT24	Q2M2I5	525 aa		13.73	□□□□□ -0.21
UBE3B-205	ENST00000535900	IFFO2	Q5TF58	517 aa		13.73	□□□□□ -0.21
UBE3B-205	ENST00000535900	DBF4	Q9UBU7	674 aa	Predicted RBP	13.73	□□□□□ -0.21
UBE3B-205	ENST00000535900	USP16	Q9Y5T5	823 aa		13.73	□□□□□ -0.21
UBE3B-205	ENST00000535900	FER1L6	Q2WGJ9	1857 aa		13.72	□□□□□ -0.21

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