RNA–Protein interactions for RNA: ENST00000535458.6

KPNB1-202, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2 BASIC

Gene KPNB1, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-202ENST00000535458 NOL7Q9UMY1 257 aaKnown RBP10.65□□□□□ -0.7
KPNB1-202ENST00000535458 LTN1O94822 1766 aa10.65□□□□□ -0.7
KPNB1-202ENST00000535458 SYAP1Q96A49 352 aaPredicted RBP10.65□□□□□ -0.7
KPNB1-202ENST00000535458 LARP6Q9BRS8 491 aaKnown RBP10.65□□□□□ -0.7
KPNB1-202ENST00000535458 CHMP4AQ9BY43 222 aa10.65□□□□□ -0.7
KPNB1-202ENST00000535458 SPG7Q9UQ90 795 aa10.65□□□□□ -0.7
KPNB1-202ENST00000535458 AK2P54819 239 aa10.65□□□□□ -0.71
KPNB1-202ENST00000535458 ZNF530Q6P9A1 599 aaPredicted RBP10.65□□□□□ -0.71
KPNB1-202ENST00000535458 MPRIPQ6WCQ1 1025 aa10.65□□□□□ -0.71
KPNB1-202ENST00000535458 LRRC59Q96AG4 307 aaKnown RBP10.65□□□□□ -0.71
KPNB1-202ENST00000535458 RBM33Q96EV2 1170 aaKnown RBP10.65□□□□□ -0.71
KPNB1-202ENST00000535458 TTC14Q96N46 770 aa10.65□□□□□ -0.71
KPNB1-202ENST00000535458 ADCY9O60503 1353 aa10.64□□□□□ -0.71
KPNB1-202ENST00000535458 TSPY26PQ9H489 355 aa10.64□□□□□ -0.71
KPNB1-202ENST00000535458 MED1Q15648 1581 aaPredicted RBP10.64□□□□□ -0.71
KPNB1-202ENST00000535458 RPAP1Q9BWH6 1393 aaPredicted RBP10.64□□□□□ -0.71
KPNB1-202ENST00000535458 GLRX3O76003 335 aaKnown RBP10.64□□□□□ -0.71
KPNB1-202ENST00000535458 AKAP4Q5JQC9 854 aa10.64□□□□□ -0.71
KPNB1-202ENST00000535458 ZKSCAN5Q9Y2L8 839 aa10.64□□□□□ -0.71
KPNB1-202ENST00000535458 TTC41PQ6P2S7 1318 aa10.63□□□□□ -0.71
KPNB1-202ENST00000535458 RUFY3Q7L099 469 aa10.63□□□□□ -0.71
KPNB1-202ENST00000535458 USP42Q9H9J4 1324 aaKnown RBP10.63□□□□□ -0.71
KPNB1-202ENST00000535458 CBX1P83916 185 aa10.63□□□□□ -0.71
KPNB1-202ENST00000535458 PSME1Q06323 249 aa10.63□□□□□ -0.71
KPNB1-202ENST00000535458 PLEKHO1Q53GL0 409 aaPredicted RBP10.63□□□□□ -0.71
KPNB1-202ENST00000535458 CLASRPQ8N2M8 674 aaKnown RBP10.63□□□□□ -0.71
KPNB1-202ENST00000535458 DIAPH3Q9NSV4 1193 aa10.63□□□□□ -0.71
KPNB1-202ENST00000535458 C9orf78Q9NZ63 289 aaPredicted RBP10.63□□□□□ -0.71
KPNB1-202ENST00000535458 DBF4Q9UBU7 674 aaPredicted RBP10.63□□□□□ -0.71
KPNB1-202ENST00000535458 LIMCH1Q9UPQ0 1083 aa10.63□□□□□ -0.71
KPNB1-202ENST00000535458 MAP3K2Q9Y2U5 619 aa10.63□□□□□ -0.71
KPNB1-202ENST00000535458 KDM3BQ7LBC6 1761 aa10.63□□□□□ -0.71
KPNB1-202ENST00000535458 IGSF3O75054 1194 aa10.63□□□□□ -0.71
KPNB1-202ENST00000535458 CPA1P15085 419 aa10.63□□□□□ -0.71
KPNB1-202ENST00000535458 ZNF500O60304 480 aaPredicted RBP10.62□□□□□ -0.71
KPNB1-202ENST00000535458 CASTP20810 708 aaKnown RBP10.62□□□□□ -0.71
KPNB1-202ENST00000535458 MTX1Q13505 466 aa10.62□□□□□ -0.71
KPNB1-202ENST00000535458 USP25Q9UHP3 1055 aa10.62□□□□□ -0.71
KPNB1-202ENST00000535458 PA2G4Q9UQ80 394 aaKnown RBP10.62□□□□□ -0.71
KPNB1-202ENST00000535458 NFAT5O94916 1531 aa10.62□□□□□ -0.71
KPNB1-202ENST00000535458 TCHHQ07283 1943 aa10.62□□□□□ -0.71
KPNB1-202ENST00000535458 TULP1O00294 542 aaPredicted RBP10.62□□□□□ -0.71
KPNB1-202ENST00000535458 RNMTO43148 476 aaKnown RBP10.62□□□□□ -0.71
KPNB1-202ENST00000535458 ZSCAN22P10073 491 aaPredicted RBP10.62□□□□□ -0.71
KPNB1-202ENST00000535458 ESCO1Q5FWF5 840 aa10.62□□□□□ -0.71
KPNB1-202ENST00000535458 KCNH5Q8NCM2 988 aa10.62□□□□□ -0.71
KPNB1-202ENST00000535458 CNPY2Q9Y2B0 182 aa10.62□□□□□ -0.71
KPNB1-202ENST00000535458 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.62□□□□□ -0.71
KPNB1-202ENST00000535458 PHF14O94880 888 aa10.61□□□□□ -0.71
KPNB1-202ENST00000535458 SYT1P21579 422 aa10.61□□□□□ -0.71
KPNB1-202ENST00000535458 PTH1RQ03431 593 aa10.61□□□□□ -0.71
KPNB1-202ENST00000535458 PROSER3Q2NL68 480 aa10.61□□□□□ -0.71
KPNB1-202ENST00000535458 RUFY2Q8WXA3 655 aa10.61□□□□□ -0.71
KPNB1-202ENST00000535458 TTC12Q9H892 705 aaPredicted RBP10.61□□□□□ -0.71
KPNB1-202ENST00000535458 ECHDC1Q9NTX5 307 aa10.61□□□□□ -0.71
KPNB1-202ENST00000535458 CCDC39Q9UFE4 941 aa10.61□□□□□ -0.71
KPNB1-202ENST00000535458 SMC3Q9UQE7 1217 aa10.61□□□□□ -0.71
KPNB1-202ENST00000535458 CHMP3Q9Y3E7 222 aa10.61□□□□□ -0.71
KPNB1-202ENST00000535458 STX6O43752 255 aa10.61□□□□□ -0.71
KPNB1-202ENST00000535458 KIAA2012Q0VF49 1180 aa10.61□□□□□ -0.71
KPNB1-202ENST00000535458 C1orf141Q5JVX7 400 aa10.61□□□□□ -0.71
KPNB1-202ENST00000535458 TMEM87AQ8NBN3 555 aa10.61□□□□□ -0.71
KPNB1-202ENST00000535458 RGPD2P0DJD1 1756 aa10.61□□□□□ -0.71
KPNB1-202ENST00000535458 ALDH1L1O75891 902 aa10.61□□□□□ -0.71
KPNB1-202ENST00000535458 LARGE1O95461 756 aa10.61□□□□□ -0.71
KPNB1-202ENST00000535458 IFIT2P09913 472 aaKnown RBP10.61□□□□□ -0.71
KPNB1-202ENST00000535458 CWF19L2Q2TBE0 894 aaKnown RBP10.61□□□□□ -0.71
KPNB1-202ENST00000535458 AMOTQ4VCS5 1084 aa10.61□□□□□ -0.71
KPNB1-202ENST00000535458 KSR2Q6VAB6 950 aa10.61□□□□□ -0.71
KPNB1-202ENST00000535458 PRAMEF22A3QJZ6 481 aa10.6□□□□□ -0.71
KPNB1-202ENST00000535458 GIGYF1O75420 1035 aaPredicted RBP10.6□□□□□ -0.71
KPNB1-202ENST00000535458 ADCK5Q3MIX3 580 aa10.6□□□□□ -0.71
KPNB1-202ENST00000535458 PRPF40BQ6NWY9 871 aaKnown RBP10.6□□□□□ -0.71
KPNB1-202ENST00000535458 GPATCH3Q96I76 525 aa10.6□□□□□ -0.71
KPNB1-202ENST00000535458 HYPKQ9NX55 129 aa10.6□□□□□ -0.71
KPNB1-202ENST00000535458 LMO7Q8WWI1 1683 aa10.6□□□□□ -0.71
KPNB1-202ENST00000535458 SPDYE4A6NLX3 237 aa10.6□□□□□ -0.71
KPNB1-202ENST00000535458 CSPP1Q1MSJ5 1256 aa10.6□□□□□ -0.71
KPNB1-202ENST00000535458 CCDC83Q8IWF9 413 aa10.6□□□□□ -0.71
KPNB1-202ENST00000535458 JAKMIP1Q96N16 626 aaKnown RBP10.6□□□□□ -0.71
KPNB1-202ENST00000535458 PDRG1Q9NUG6 133 aa10.6□□□□□ -0.71
KPNB1-202ENST00000535458 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.6□□□□□ -0.718e-8■■■□□ 14.7
KPNB1-202ENST00000535458 CRYBG1Q9Y4K1 1723 aa10.6□□□□□ -0.71
KPNB1-202ENST00000535458 F13A1P00488 732 aa10.59□□□□□ -0.71
KPNB1-202ENST00000535458 MCM5P33992 734 aa10.59□□□□□ -0.71
KPNB1-202ENST00000535458 AACSQ86V21 672 aa10.59□□□□□ -0.71
KPNB1-202ENST00000535458 ERC1Q8IUD2 1116 aa10.59□□□□□ -0.71
KPNB1-202ENST00000535458 CCDC183Q5T5S1 534 aa10.59□□□□□ -0.71
KPNB1-202ENST00000535458 SASS6Q6UVJ0 657 aa10.59□□□□□ -0.71
KPNB1-202ENST00000535458 EVI5LQ96CN4 794 aa10.59□□□□□ -0.71
KPNB1-202ENST00000535458 MAP7D2Q96T17 732 aa10.59□□□□□ -0.71
KPNB1-202ENST00000535458 STRCP1A6NGW2 1772 aa10.59□□□□□ -0.71
KPNB1-202ENST00000535458 PXDNQ92626 1479 aa10.59□□□□□ -0.71
KPNB1-202ENST00000535458 VPS53Q5VIR6 699 aa10.59□□□□□ -0.71
KPNB1-202ENST00000535458 SPC24Q8NBT2 197 aa10.59□□□□□ -0.71
KPNB1-202ENST00000535458 DDX54Q8TDD1 881 aaKnown RBP10.59□□□□□ -0.71
KPNB1-202ENST00000535458 HDAC5Q9UQL6 1122 aa10.59□□□□□ -0.71
KPNB1-202ENST00000535458 FIBPO43427 364 aa10.58□□□□□ -0.72
KPNB1-202ENST00000535458 GCP02774 474 aa10.58□□□□□ -0.72
KPNB1-202ENST00000535458 GJB2P29033 226 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms