RNA–Protein interactions for RNA: ENST00000535190.1

NPIPB3-207, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5

Gene NPIPB3, Length 631 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-207ENST00000535190 KDM3BQ7LBC6 1761 aa10.59□□□□□ -0.71
NPIPB3-207ENST00000535190 SRGNP10124 158 aa10.58□□□□□ -0.72
NPIPB3-207ENST00000535190 PDE6BP35913 854 aa10.58□□□□□ -0.72
NPIPB3-207ENST00000535190 RASSF7Q02833 373 aa10.58□□□□□ -0.72
NPIPB3-207ENST00000535190 HLFQ16534 295 aa10.58□□□□□ -0.72
NPIPB3-207ENST00000535190 LRP10Q7Z4F1 713 aa10.58□□□□□ -0.72
NPIPB3-207ENST00000535190 PNISRQ8TF01 805 aaKnown RBP10.58□□□□□ -0.72
NPIPB3-207ENST00000535190 C7orf43Q8WVR3 580 aa10.58□□□□□ -0.72
NPIPB3-207ENST00000535190 RNF181Q9P0P0 153 aa10.58□□□□□ -0.72
NPIPB3-207ENST00000535190 SLX4Q8IY92 1834 aa10.58□□□□□ -0.72
NPIPB3-207ENST00000535190 TOMM70O94826 608 aa10.57□□□□□ -0.72
NPIPB3-207ENST00000535190 LMNB1P20700 586 aa10.57□□□□□ -0.72
NPIPB3-207ENST00000535190 FER1L6Q2WGJ9 1857 aa10.57□□□□□ -0.72
NPIPB3-207ENST00000535190 COL11A2P13942 1736 aaPredicted RBP10.56□□□□□ -0.72
NPIPB3-207ENST00000535190 POTECB2RU33 542 aa10.56□□□□□ -0.72
NPIPB3-207ENST00000535190 ANP32CO43423 234 aa10.56□□□□□ -0.72
NPIPB3-207ENST00000535190 TMPOP42166 694 aaKnown RBP10.56□□□□□ -0.72
NPIPB3-207ENST00000535190 STYK1Q6J9G0 422 aa10.56□□□□□ -0.72
NPIPB3-207ENST00000535190 TTLL7Q6ZT98 887 aa10.56□□□□□ -0.72
NPIPB3-207ENST00000535190 CNBD1Q8NA66 436 aa10.56□□□□□ -0.72
NPIPB3-207ENST00000535190 ZNF622Q969S3 477 aaKnown RBP eCLIP10.56□□□□□ -0.72
NPIPB3-207ENST00000535190 PNNQ9H307 717 aaKnown RBP10.56□□□□□ -0.72
NPIPB3-207ENST00000535190 GLTPD2A6NH11 291 aa10.55□□□□□ -0.72
NPIPB3-207ENST00000535190 ERVV-1B6SEH8 477 aa10.55□□□□□ -0.72
NPIPB3-207ENST00000535190 C21orf2O43822 256 aa10.55□□□□□ -0.72
NPIPB3-207ENST00000535190 RIPK4P57078 832 aa10.55□□□□□ -0.72
NPIPB3-207ENST00000535190 PDIA6Q15084 440 aa10.55□□□□□ -0.72
NPIPB3-207ENST00000535190 DNAJC5GQ8N7S2 189 aa10.55□□□□□ -0.72
NPIPB3-207ENST00000535190 RBM46Q8TBY0 533 aaKnown RBP10.55□□□□□ -0.72
NPIPB3-207ENST00000535190 MASTLQ96GX5 879 aa10.55□□□□□ -0.72
NPIPB3-207ENST00000535190 RRAGCQ9HB90 399 aa10.55□□□□□ -0.72
NPIPB3-207ENST00000535190 BABAM1Q9NWV8 329 aa10.55□□□□□ -0.72
NPIPB3-207ENST00000535190 NUP98P52948 1817 aa10.55□□□□□ -0.72
NPIPB3-207ENST00000535190 CEP350Q5VT06 3117 aa10.55□□□□□ -0.72
NPIPB3-207ENST00000535190 ZC3H4Q9UPT8 1303 aaKnown RBP10.55□□□□□ -0.72
NPIPB3-207ENST00000535190 DICER1Q9UPY3 1922 aaKnown RBP10.54□□□□□ -0.72
NPIPB3-207ENST00000535190 NEFMP07197 916 aa10.54□□□□□ -0.72
NPIPB3-207ENST00000535190 NPM2Q86SE8 214 aaKnown RBP10.54□□□□□ -0.72
NPIPB3-207ENST00000535190 NBPF5PQ86XG9 351 aaPredicted RBP10.54□□□□□ -0.72
NPIPB3-207ENST00000535190 CNKSR1Q969H4 720 aa10.54□□□□□ -0.72
NPIPB3-207ENST00000535190 TRIM35Q9UPQ4 493 aa10.54□□□□□ -0.72
NPIPB3-207ENST00000535190 NIP7Q9Y221 180 aaKnown RBP eCLIP10.54□□□□□ -0.72
NPIPB3-207ENST00000535190 LAMB4A4D0S4 1761 aa10.54□□□□□ -0.72
NPIPB3-207ENST00000535190 MAP3K15Q6ZN16 1313 aa10.54□□□□□ -0.72
NPIPB3-207ENST00000535190 MYBBP1AQ9BQG0 1328 aaKnown RBP10.54□□□□□ -0.72
NPIPB3-207ENST00000535190 LTBP3Q9NS15 1303 aa10.54□□□□□ -0.72
NPIPB3-207ENST00000535190 CHL1O00533 1208 aa10.53□□□□□ -0.72
NPIPB3-207ENST00000535190 ST5P78524 1137 aa10.53□□□□□ -0.72
NPIPB3-207ENST00000535190 PRPF40BQ6NWY9 871 aaKnown RBP10.53□□□□□ -0.72
NPIPB3-207ENST00000535190 TPTE2Q6XPS3 522 aa10.53□□□□□ -0.72
NPIPB3-207ENST00000535190 ZNF34Q8IZ26 560 aa10.53□□□□□ -0.72
NPIPB3-207ENST00000535190 ADAMTS8Q9UP79 889 aa10.53□□□□□ -0.72
NPIPB3-207ENST00000535190 ZNF652Q9Y2D9 606 aa10.53□□□□□ -0.72
NPIPB3-207ENST00000535190 RRP7AQ9Y3A4 280 aaKnown RBP10.53□□□□□ -0.72
NPIPB3-207ENST00000535190 KDM2BQ8NHM5 1336 aa10.53□□□□□ -0.72
NPIPB3-207ENST00000535190 MAPK8IP3Q9UPT6 1336 aa10.53□□□□□ -0.72
NPIPB3-207ENST00000535190 ARFGEF2Q9Y6D5 1785 aa10.52□□□□□ -0.72
NPIPB3-207ENST00000535190 NGEFQ8N5V2 710 aa10.52□□□□□ -0.73
NPIPB3-207ENST00000535190 PRKRIP1Q9H875 184 aaPredicted RBP10.52□□□□□ -0.73
NPIPB3-207ENST00000535190 ERBB4Q15303 1308 aa10.52□□□□□ -0.73
NPIPB3-207ENST00000535190 NPR1P16066 1061 aa10.51□□□□□ -0.73
NPIPB3-207ENST00000535190 FSTL1Q12841 308 aa10.51□□□□□ -0.73
NPIPB3-207ENST00000535190 PROSER3Q2NL68 480 aa10.51□□□□□ -0.73
NPIPB3-207ENST00000535190 CRY2Q49AN0 593 aa10.51□□□□□ -0.73
NPIPB3-207ENST00000535190 SUSD4Q5VX71 490 aa10.51□□□□□ -0.73
NPIPB3-207ENST00000535190 GIGYF2Q6Y7W6 1299 aaKnown RBP10.51□□□□□ -0.73
NPIPB3-207ENST00000535190 CCDC146Q8IYE0 955 aa10.51□□□□□ -0.73
NPIPB3-207ENST00000535190 RUNDC1Q96C34 613 aa10.51□□□□□ -0.73
NPIPB3-207ENST00000535190 ZNF219Q9P2Y4 722 aaPredicted RBP10.51□□□□□ -0.73
NPIPB3-207ENST00000535190 TSPYL4Q9UJ04 414 aa10.51□□□□□ -0.73
NPIPB3-207ENST00000535190 UBN2Q6ZU65 1347 aa10.51□□□□□ -0.73
NPIPB3-207ENST00000535190 CACNA1SQ13698 1873 aa10.51□□□□□ -0.73
NPIPB3-207ENST00000535190 SNED1Q8TER0 1413 aa10.5□□□□□ -0.73
NPIPB3-207ENST00000535190 FAM177BA6PVY3 158 aa10.5□□□□□ -0.73
NPIPB3-207ENST00000535190 MYL6BP14649 208 aa10.5□□□□□ -0.73
NPIPB3-207ENST00000535190 VEGFAP15692 232 aaPredicted RBP10.5□□□□□ -0.73
NPIPB3-207ENST00000535190 HOXA10P31260 410 aaPredicted RBP10.5□□□□□ -0.73
NPIPB3-207ENST00000535190 APLP1P51693 650 aa10.5□□□□□ -0.73
NPIPB3-207ENST00000535190 KRT24Q2M2I5 525 aa10.5□□□□□ -0.73
NPIPB3-207ENST00000535190 ERFEQ4G0M1 354 aa10.5□□□□□ -0.73
NPIPB3-207ENST00000535190 OLFM4Q6UX06 510 aa10.5□□□□□ -0.73
NPIPB3-207ENST00000535190 NUTM1Q86Y26 1132 aa10.5□□□□□ -0.73
NPIPB3-207ENST00000535190 TNRC6CQ9HCJ0 1690 aaKnown RBP10.5□□□□□ -0.73
NPIPB3-207ENST00000535190 ABCC12Q96J65 1359 aa10.5□□□□□ -0.73
NPIPB3-207ENST00000535190 NTSR2O95665 410 aa10.49□□□□□ -0.73
NPIPB3-207ENST00000535190 ANXA1P04083 346 aa10.49□□□□□ -0.73
NPIPB3-207ENST00000535190 EIF2S2P20042 333 aaKnown RBP10.49□□□□□ -0.73
NPIPB3-207ENST00000535190 SLC10A5Q5PT55 438 aa10.49□□□□□ -0.73
NPIPB3-207ENST00000535190 TAOK3Q9H2K8 898 aa10.49□□□□□ -0.73
NPIPB3-207ENST00000535190 ZBTB3Q9H5J0 574 aa10.49□□□□□ -0.73
NPIPB3-207ENST00000535190 WDR90Q96KV7 1748 aa10.49□□□□□ -0.73
NPIPB3-207ENST00000535190 NPHP1O15259 732 aa10.48□□□□□ -0.73
NPIPB3-207ENST00000535190 ZNF853P0CG23 659 aa10.48□□□□□ -0.73
NPIPB3-207ENST00000535190 GPTP24298 496 aa10.48□□□□□ -0.73
NPIPB3-207ENST00000535190 ALDH1B1P30837 517 aa10.48□□□□□ -0.73
NPIPB3-207ENST00000535190 LMOD3Q0VAK6 560 aa10.48□□□□□ -0.73
NPIPB3-207ENST00000535190 NEUROD2Q15784 382 aa10.48□□□□□ -0.73
NPIPB3-207ENST00000535190 SOGA3Q5TF21 947 aa10.48□□□□□ -0.73
NPIPB3-207ENST00000535190 C3orf67Q6ZVT6 689 aa10.48□□□□□ -0.73
NPIPB3-207ENST00000535190 NYXQ9GZU5 481 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms