RNA–Protein interactions for RNA: ENST00000534382.5

CTSB-231, Transcript of cathepsin B, human

TSL 4

Gene CTSB, Length 764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-231	ENST00000534382	HDGFL1	Q5TGJ6	251 aa		18.84	■□□□□ 0.61
CTSB-231	ENST00000534382	KIF6	Q6ZMV9	814 aa		18.84	■□□□□ 0.61
CTSB-231	ENST00000534382	TTLL7	Q6ZT98	887 aa		18.84	■□□□□ 0.61
CTSB-231	ENST00000534382	DDX21	Q9NR30	783 aa	Known RBP eCLIP	18.84	■□□□□ 0.61
CTSB-231	ENST00000534382	GRIN3B	O60391	1043 aa		18.83	■□□□□ 0.6
CTSB-231	ENST00000534382	ANXA1	P04083	346 aa		18.83	■□□□□ 0.6
CTSB-231	ENST00000534382	PROSER3	Q2NL68	480 aa		18.83	■□□□□ 0.6
CTSB-231	ENST00000534382	WDR63	Q8IWG1	891 aa		18.83	■□□□□ 0.6
CTSB-231	ENST00000534382	BCOR	Q6W2J9	1755 aa		18.83	■□□□□ 0.6
CTSB-231	ENST00000534382	DIEXF	Q68CQ4	756 aa	Known RBP	18.82	■□□□□ 0.6
CTSB-231	ENST00000534382	WWC3	Q9ULE0	1092 aa		18.82	■□□□□ 0.6
CTSB-231	ENST00000534382	NIP7	Q9Y221	180 aa	Known RBP eCLIP	18.82	■□□□□ 0.6
CTSB-231	ENST00000534382	NRXN2	Q9P2S2	1712 aa		18.82	■□□□□ 0.6
CTSB-231	ENST00000534382	ELL2	O00472	640 aa	Predicted RBP	18.81	■□□□□ 0.6
CTSB-231	ENST00000534382	KCNA3	P22001	575 aa		18.81	■□□□□ 0.6
CTSB-231	ENST00000534382	PRR5L	Q6MZQ0	368 aa		18.81	■□□□□ 0.6
CTSB-231	ENST00000534382	C8orf58	Q8NAV2	365 aa		18.81	■□□□□ 0.6
CTSB-231	ENST00000534382	TSR2	Q969E8	191 aa	Known RBP	18.81	■□□□□ 0.6
CTSB-231	ENST00000534382	ZBTB3	Q9H5J0	574 aa		18.81	■□□□□ 0.6
CTSB-231	ENST00000534382	CHPF2	Q9P2E5	772 aa		18.81	■□□□□ 0.6
CTSB-231	ENST00000534382	AFDN	P55196	1824 aa	Known RBP	18.81	■□□□□ 0.6
CTSB-231	ENST00000534382	CHRNA5	P30532	468 aa		18.8	■□□□□ 0.6
CTSB-231	ENST00000534382	COPS6	Q7L5N1	327 aa		18.8	■□□□□ 0.6
CTSB-231	ENST00000534382	DBF4	Q9UBU7	674 aa	Predicted RBP	18.8	■□□□□ 0.6
CTSB-231	ENST00000534382	UTRN	P46939	3433 aa		18.8	■□□□□ 0.6
CTSB-231	ENST00000534382	NPHP1	O15259	732 aa		18.79	■□□□□ 0.6
CTSB-231	ENST00000534382	AIMP1	Q12904	312 aa	Known RBP	18.79	■□□□□ 0.6
CTSB-231	ENST00000534382	GIGYF2	Q6Y7W6	1299 aa	Known RBP	18.79	■□□□□ 0.6
CTSB-231	ENST00000534382	NBPF5P	Q86XG9	351 aa	Predicted RBP	18.79	■□□□□ 0.6
CTSB-231	ENST00000534382	CNBD1	Q8NA66	436 aa		18.79	■□□□□ 0.6
CTSB-231	ENST00000534382	XAGE3	Q8WTP9	111 aa		18.79	■□□□□ 0.6
CTSB-231	ENST00000534382	PIM2	Q9P1W9	311 aa		18.79	■□□□□ 0.6
CTSB-231	ENST00000534382	KIAA1551	Q9HCM1	1747 aa		18.79	■□□□□ 0.6
CTSB-231	ENST00000534382	GOLGB1	Q14789	3259 aa	Known RBP	18.79	■□□□□ 0.6
CTSB-231	ENST00000534382	N4BP2	Q86UW6	1770 aa	Predicted RBP	18.78	■□□□□ 0.6
CTSB-231	ENST00000534382	TPTE2	Q6XPS3	522 aa		18.78	■□□□□ 0.6
CTSB-231	ENST00000534382	BRIP1	Q9BX63	1249 aa		18.78	■□□□□ 0.6
CTSB-231	ENST00000534382	CHMP4A	Q9BY43	222 aa		18.78	■□□□□ 0.6
CTSB-231	ENST00000534382	YY1	P25490	414 aa		18.77	■□□□□ 0.6
CTSB-231	ENST00000534382	ST5	P78524	1137 aa		18.77	■□□□□ 0.6
CTSB-231	ENST00000534382	CCDC24	Q8N4L8	307 aa		18.77	■□□□□ 0.6
CTSB-231	ENST00000534382	TSPYL6	Q8N831	410 aa		18.77	■□□□□ 0.6
CTSB-231	ENST00000534382	HYPK	Q9NX55	129 aa		18.77	■□□□□ 0.6
CTSB-231	ENST00000534382	BCS1L	Q9Y276	419 aa		18.77	■□□□□ 0.6
CTSB-231	ENST00000534382	ATP10D	Q9P241	1426 aa		18.76	■□□□□ 0.59
CTSB-231	ENST00000534382	PDE6B	P35913	854 aa		18.76	■□□□□ 0.59
CTSB-231	ENST00000534382	C2CD5	Q86YS7	1000 aa		18.76	■□□□□ 0.59
CTSB-231	ENST00000534382	PDZRN3	Q9UPQ7	1066 aa		18.76	■□□□□ 0.59
CTSB-231	ENST00000534382	FAM177B	A6PVY3	158 aa		18.75	■□□□□ 0.59
CTSB-231	ENST00000534382		H0YIN7	160 aa		18.75	■□□□□ 0.59
CTSB-231	ENST00000534382	GPT	P24298	496 aa		18.75	■□□□□ 0.59
CTSB-231	ENST00000534382	DALRD3	Q5D0E6	543 aa	Known RBP	18.75	■□□□□ 0.59
CTSB-231	ENST00000534382	CCDC30	Q5VVM6	783 aa		18.75	■□□□□ 0.59
CTSB-231	ENST00000534382	ZNF34	Q8IZ26	560 aa		18.75	■□□□□ 0.59
CTSB-231	ENST00000534382	FANCI	Q9NVI1	1328 aa		18.74	■□□□□ 0.59
CTSB-231	ENST00000534382	MIER1	Q8N108	512 aa		18.74	■□□□□ 0.59
CTSB-231	ENST00000534382	NYX	Q9GZU5	481 aa		18.74	■□□□□ 0.59
CTSB-231	ENST00000534382	NUP98	P52948	1817 aa		18.73	■□□□□ 0.59
CTSB-231	ENST00000534382	GTF2E1	P29083	439 aa	Predicted RBP	18.73	■□□□□ 0.59
CTSB-231	ENST00000534382	GOLGA2	Q08379	1002 aa		18.73	■□□□□ 0.59
CTSB-231	ENST00000534382	TWISTNB	Q3B726	338 aa	Predicted RBP	18.73	■□□□□ 0.59
CTSB-231	ENST00000534382	HSP90AB3P	Q58FF7	597 aa		18.73	■□□□□ 0.59
CTSB-231	ENST00000534382	PLBD2	Q8NHP8	589 aa		18.73	■□□□□ 0.59
CTSB-231	ENST00000534382	SPINK5	Q9NQ38	1064 aa	Predicted RBP	18.73	■□□□□ 0.59
CTSB-231	ENST00000534382	UBN2	Q6ZU65	1347 aa		18.73	■□□□□ 0.59
CTSB-231	ENST00000534382	ZNF521	Q96K83	1311 aa		18.73	■□□□□ 0.59
CTSB-231	ENST00000534382	PARP10	Q53GL7	1025 aa		18.72	■□□□□ 0.59
CTSB-231	ENST00000534382	SUSD4	Q5VX71	490 aa		18.72	■□□□□ 0.59
CTSB-231	ENST00000534382	ANKRD13D	Q6ZTN6	518 aa		18.72	■□□□□ 0.59
CTSB-231	ENST00000534382	MYH16	Q9H6N6	1097 aa		18.72	■□□□□ 0.59
CTSB-231	ENST00000534382	TCIRG1	Q13488	830 aa		18.71	■□□□□ 0.59
CTSB-231	ENST00000534382	PPP1R42	Q7Z4L9	355 aa		18.71	■□□□□ 0.59
CTSB-231	ENST00000534382	TTLL6	Q8N841	843 aa		18.71	■□□□□ 0.59
CTSB-231	ENST00000534382	PHAX	Q9H814	394 aa	Known RBP	18.71	■□□□□ 0.59
CTSB-231	ENST00000534382	BRCA1	P38398	1863 aa	Known RBP	18.71	■□□□□ 0.59
CTSB-231	ENST00000534382	IBTK	Q9P2D0	1353 aa	Predicted RBP	18.7	■□□□□ 0.58
CTSB-231	ENST00000534382	SRGN	P10124	158 aa		18.7	■□□□□ 0.58
CTSB-231	ENST00000534382	NUTM1	Q86Y26	1132 aa		18.7	■□□□□ 0.58
CTSB-231	ENST00000534382	ZNF622	Q969S3	477 aa	Known RBP eCLIP	18.7	■□□□□ 0.58
CTSB-231	ENST00000534382	CHD4	Q14839	1912 aa		18.7	■□□□□ 0.58
CTSB-231	ENST00000534382	ANKRD31	Q8N7Z5	1873 aa		18.69	■□□□□ 0.58
CTSB-231	ENST00000534382	KLRG2	A4D1S0	409 aa	Predicted RBP	18.69	■□□□□ 0.58
CTSB-231	ENST00000534382	EXOSC9	Q06265	439 aa	Known RBP	18.69	■□□□□ 0.58
CTSB-231	ENST00000534382	ARHGAP27	Q6ZUM4	889 aa		18.69	■□□□□ 0.58
CTSB-231	ENST00000534382	STK31	Q9BXU1	1019 aa		18.69	■□□□□ 0.58
CTSB-231	ENST00000534382	VAMP4	O75379	141 aa		18.68	■□□□□ 0.58
CTSB-231	ENST00000534382	NTSR2	O95665	410 aa		18.68	■□□□□ 0.58
CTSB-231	ENST00000534382	ERFE	Q4G0M1	354 aa		18.68	■□□□□ 0.58
CTSB-231	ENST00000534382	STYK1	Q6J9G0	422 aa		18.68	■□□□□ 0.58
CTSB-231	ENST00000534382	RIC3	Q7Z5B4	369 aa		18.68	■□□□□ 0.58
CTSB-231	ENST00000534382	NLRP10	Q86W26	655 aa		18.68	■□□□□ 0.58
CTSB-231	ENST00000534382	MASTL	Q96GX5	879 aa		18.68	■□□□□ 0.58
CTSB-231	ENST00000534382	UTP14A	Q9BVJ6	771 aa	Known RBP	18.68	■□□□□ 0.58
CTSB-231	ENST00000534382	TCERG1	O14776	1098 aa	Known RBP	18.67	■□□□□ 0.58
CTSB-231	ENST00000534382	CNKSR1	Q969H4	720 aa		18.67	■□□□□ 0.58
CTSB-231	ENST00000534382	NPR1	P16066	1061 aa		18.66	■□□□□ 0.58
CTSB-231	ENST00000534382	ABCC12	Q96J65	1359 aa		18.66	■□□□□ 0.58
CTSB-231	ENST00000534382	DLEC1	Q9Y238	1755 aa		18.65	■□□□□ 0.58
CTSB-231	ENST00000534382	DDX58	O95786	925 aa	Known RBP	18.65	■□□□□ 0.58
CTSB-231	ENST00000534382	SLC4A2	P04920	1241 aa		18.65	■□□□□ 0.58

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