RNA–Protein interactions for RNA: ENST00000534313.5

SIPA1-209, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,521 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-209ENST00000534313 COL9A3Q14050 684 aaPredicted RBP20.79■□□□□ 0.92
SIPA1-209ENST00000534313 C1orf141Q5JVX7 400 aa20.79■□□□□ 0.92
SIPA1-209ENST00000534313 AACSQ86V21 672 aa20.79■□□□□ 0.92
SIPA1-209ENST00000534313 KLHDC4Q8TBB5 520 aa20.79■□□□□ 0.92
SIPA1-209ENST00000534313 ORAI2Q96SN7 254 aa20.79■□□□□ 0.92
SIPA1-209ENST00000534313 SLIT1O75093 1534 aa20.79■□□□□ 0.92
SIPA1-209ENST00000534313 TTC14Q96N46 770 aa20.79■□□□□ 0.92
SIPA1-209ENST00000534313 SYT1P21579 422 aa20.78■□□□□ 0.92
SIPA1-209ENST00000534313 PLEKHO1Q53GL0 409 aaPredicted RBP20.78■□□□□ 0.92
SIPA1-209ENST00000534313 JARID2Q92833 1246 aaPredicted RBP20.78■□□□□ 0.92
SIPA1-209ENST00000534313 TCEANC2Q96MN5 208 aa20.78■□□□□ 0.92
SIPA1-209ENST00000534313 DBF4Q9UBU7 674 aaPredicted RBP20.78■□□□□ 0.92
SIPA1-209ENST00000534313 SMC3Q9UQE7 1217 aa20.78■□□□□ 0.92
SIPA1-209ENST00000534313 PXDNLA1KZ92 1463 aa20.78■□□□□ 0.92
SIPA1-209ENST00000534313 TUBGCP6Q96RT7 1819 aa20.78■□□□□ 0.92
SIPA1-209ENST00000534313 AKAP4Q5JQC9 854 aa20.78■□□□□ 0.92
SIPA1-209ENST00000534313 RNMTO43148 476 aaKnown RBP20.78■□□□□ 0.92
SIPA1-209ENST00000534313 GLRX3O76003 335 aaKnown RBP20.78■□□□□ 0.92
SIPA1-209ENST00000534313 NOL7Q9UMY1 257 aaKnown RBP20.78■□□□□ 0.92
SIPA1-209ENST00000534313 LIMCH1Q9UPQ0 1083 aa20.78■□□□□ 0.92
SIPA1-209ENST00000534313 ANKARQ7Z5J8 1434 aa20.77■□□□□ 0.92
SIPA1-209ENST00000534313 NECAB1Q8N987 351 aa20.77■□□□□ 0.92
SIPA1-209ENST00000534313 KCNJ4P48050 445 aa20.77■□□□□ 0.92
SIPA1-209ENST00000534313 SLC39A6Q13433 755 aa20.77■□□□□ 0.92
SIPA1-209ENST00000534313 FAM227BQ96M60 508 aa20.77■□□□□ 0.92
SIPA1-209ENST00000534313 STX6O43752 255 aa20.77■□□□□ 0.91
SIPA1-209ENST00000534313 PIP4K2AP48426 406 aaPredicted RBP20.77■□□□□ 0.91
SIPA1-209ENST00000534313 ECHDC1Q9NTX5 307 aa20.76■□□□□ 0.91
SIPA1-209ENST00000534313 UQCRHLA0A096LP55 91 aa20.76■□□□□ 0.91
SIPA1-209ENST00000534313 OFD1O75665 1012 aa20.76■□□□□ 0.91
SIPA1-209ENST00000534313 UQCRHP07919 91 aa20.76■□□□□ 0.91
SIPA1-209ENST00000534313 ZSCAN22P10073 491 aaPredicted RBP20.76■□□□□ 0.91
SIPA1-209ENST00000534313 HSP90AB4PQ58FF6 505 aa20.76■□□□□ 0.91
SIPA1-209ENST00000534313 TLR7Q9NYK1 1049 aaKnown RBP20.76■□□□□ 0.91
SIPA1-209ENST00000534313 GIGYF1O75420 1035 aaPredicted RBP20.75■□□□□ 0.91
SIPA1-209ENST00000534313 SYAP1Q96A49 352 aaPredicted RBP20.75■□□□□ 0.91
SIPA1-209ENST00000534313 SUCLG2Q96I99 432 aa20.75■□□□□ 0.91
SIPA1-209ENST00000534313 MYL6BP14649 208 aa20.75■□□□□ 0.91
SIPA1-209ENST00000534313 MARF1Q9Y4F3 1742 aaKnown RBP20.75■□□□□ 0.91
SIPA1-209ENST00000534313 GCP02774 474 aa20.75■□□□□ 0.91
SIPA1-209ENST00000534313 ZNF830Q96NB3 372 aaPredicted RBP20.75■□□□□ 0.91
SIPA1-209ENST00000534313 PDRG1Q9NUG6 133 aa20.75■□□□□ 0.91
SIPA1-209ENST00000534313 TCHHQ07283 1943 aa20.74■□□□□ 0.91
SIPA1-209ENST00000534313 VPS37CA5D8V6 355 aaPredicted RBP20.74■□□□□ 0.91
SIPA1-209ENST00000534313 GJB2P29033 226 aa20.74■□□□□ 0.91
SIPA1-209ENST00000534313 BOLA2Q9H3K6 86 aa20.74■□□□□ 0.91
SIPA1-209ENST00000534313 PXDNQ92626 1479 aa20.74■□□□□ 0.91
SIPA1-209ENST00000534313 ANKRD24Q8TF21 1146 aa20.74■□□□□ 0.91
SIPA1-209ENST00000534313 BICC1Q9H694 974 aaKnown RBP20.74■□□□□ 0.91
SIPA1-209ENST00000534313 PRDM10Q9NQV6 1147 aa20.74■□□□□ 0.91
SIPA1-209ENST00000534313 AXIN2Q9Y2T1 843 aa20.74■□□□□ 0.91
SIPA1-209ENST00000534313 CHMP3Q9Y3E7 222 aa20.74■□□□□ 0.91
SIPA1-209ENST00000534313 KSR2Q6VAB6 950 aa20.74■□□□□ 0.91
SIPA1-209ENST00000534313 ZKSCAN5Q9Y2L8 839 aa20.74■□□□□ 0.91
SIPA1-209ENST00000534313 HYPKQ9NX55 129 aa20.73■□□□□ 0.91
SIPA1-209ENST00000534313 USP25Q9UHP3 1055 aa20.73■□□□□ 0.91
SIPA1-209ENST00000534313 DNM1Q05193 864 aaKnown RBP20.73■□□□□ 0.91
SIPA1-209ENST00000534313 EAF2Q96CJ1 260 aaPredicted RBP20.73■□□□□ 0.91
SIPA1-209ENST00000534313 HCLS1P14317 486 aaPredicted RBP20.73■□□□□ 0.91
SIPA1-209ENST00000534313 HOXB7P09629 217 aa20.72■□□□□ 0.91
SIPA1-209ENST00000534313 EDC3Q96F86 508 aaKnown RBP20.72■□□□□ 0.91
SIPA1-209ENST00000534313 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.72■□□□□ 0.91
SIPA1-209ENST00000534313 F13A1P00488 732 aa20.72■□□□□ 0.91
SIPA1-209ENST00000534313 IL17RAQ96F46 866 aa20.72■□□□□ 0.91
SIPA1-209ENST00000534313 TTC41PQ6P2S7 1318 aa20.72■□□□□ 0.91
SIPA1-209ENST00000534313 SASH1O94885 1247 aa20.71■□□□□ 0.91
SIPA1-209ENST00000534313 ZC3H6P61129 1189 aaKnown RBP20.71■□□□□ 0.91
SIPA1-209ENST00000534313 FERMT3Q86UX7 667 aa20.71■□□□□ 0.91
SIPA1-209ENST00000534313 KAZALD1Q96I82 304 aa20.71■□□□□ 0.91
SIPA1-209ENST00000534313 NDUFB9Q9Y6M9 179 aa20.71■□□□□ 0.91
SIPA1-209ENST00000534313 NMIQ13287 307 aaPredicted RBP20.71■□□□□ 0.91
SIPA1-209ENST00000534313 FAM173BQ6P4H8 233 aa20.71■□□□□ 0.91
SIPA1-209ENST00000534313 KCNH5Q8NCM2 988 aa20.71■□□□□ 0.91
SIPA1-209ENST00000534313 RUFY2Q8WXA3 655 aa20.71■□□□□ 0.91
SIPA1-209ENST00000534313 CCDC9Q9Y3X0 531 aaKnown RBP20.71■□□□□ 0.91
SIPA1-209ENST00000534313 TAF6LQ9Y6J9 622 aa20.71■□□□□ 0.91
SIPA1-209ENST00000534313 RBM8AQ9Y5S9 174 aaKnown RBP20.71■□□□□ 0.91
SIPA1-209ENST00000534313 LTN1O94822 1766 aa20.71■□□□□ 0.91
SIPA1-209ENST00000534313 CACNA1FO60840 1977 aa20.7■□□□□ 0.91
SIPA1-209ENST00000534313 GIMAP6Q6P9H5 292 aa20.7■□□□□ 0.9
SIPA1-209ENST00000534313 G3BP1Q13283 466 aaKnown RBP eCLIP20.7■□□□□ 0.9
SIPA1-209ENST00000534313 ME3Q16798 604 aa20.7■□□□□ 0.9
SIPA1-209ENST00000534313 GPATCH3Q96I76 525 aa20.7■□□□□ 0.9
SIPA1-209ENST00000534313 CYP46A1Q9Y6A2 500 aa20.7■□□□□ 0.9
SIPA1-209ENST00000534313 RGPD2P0DJD1 1756 aa20.7■□□□□ 0.9
SIPA1-209ENST00000534313 GRM8O00222 908 aa20.7■□□□□ 0.9
SIPA1-209ENST00000534313 HS1BP3Q53T59 392 aa20.7■□□□□ 0.9
SIPA1-209ENST00000534313 RIC3Q7Z5B4 369 aa20.7■□□□□ 0.9
SIPA1-209ENST00000534313 CCDC39Q9UFE4 941 aa20.7■□□□□ 0.9
SIPA1-209ENST00000534313 ST3GAL1Q11201 340 aa20.69■□□□□ 0.9
SIPA1-209ENST00000534313 FSD1Q9BTV5 496 aa20.68■□□□□ 0.9
SIPA1-209ENST00000534313 A0A0D9SFI3 127 aa20.68■□□□□ 0.9
SIPA1-209ENST00000534313 PHF14O94880 888 aa20.68■□□□□ 0.9
SIPA1-209ENST00000534313 CHGBP05060 677 aa20.68■□□□□ 0.9
SIPA1-209ENST00000534313 ANKLE2Q86XL3 938 aa20.68■□□□□ 0.9
SIPA1-209ENST00000534313 STK3Q13188 491 aa20.67■□□□□ 0.9
SIPA1-209ENST00000534313 MTX1Q13505 466 aa20.67■□□□□ 0.9
SIPA1-209ENST00000534313 AMOTQ4VCS5 1084 aa20.67■□□□□ 0.9
SIPA1-209ENST00000534313 CCDC183Q5T5S1 534 aa20.67■□□□□ 0.9
SIPA1-209ENST00000534313 CREB3L3Q68CJ9 461 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms