RNA–Protein interactions for RNA: ENST00000534216.5

ATPAF1-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-211ENST00000534216 PHF24Q9UPV7 400 aa7.87□□□□□ -1.15
ATPAF1-211ENST00000534216 PCDHGC4Q9Y5F7 938 aa7.87□□□□□ -1.15
ATPAF1-211ENST00000534216 GJA3Q9Y6H8 435 aa7.87□□□□□ -1.15
ATPAF1-211ENST00000534216 ATXN7O15265 892 aaPredicted RBP7.86□□□□□ -1.15
ATPAF1-211ENST00000534216 LORP23490 312 aaPredicted RBP7.86□□□□□ -1.15
ATPAF1-211ENST00000534216 SUZ12Q15022 739 aaKnown RBP7.86□□□□□ -1.15
ATPAF1-211ENST00000534216 SAMD5Q5TGI4 173 aa7.86□□□□□ -1.15
ATPAF1-211ENST00000534216 LRRC69Q6ZNQ3 347 aa7.86□□□□□ -1.15
ATPAF1-211ENST00000534216 ABHD17AQ96GS6 310 aa7.86□□□□□ -1.15
ATPAF1-211ENST00000534216 NGLY1Q96IV0 654 aa7.86□□□□□ -1.15
ATPAF1-211ENST00000534216 MBIPQ9NS73 344 aa7.86□□□□□ -1.15
ATPAF1-211ENST00000534216 ATXN7L1Q9ULK2 861 aaPredicted RBP7.86□□□□□ -1.15
ATPAF1-211ENST00000534216 FKBP5Q13451 457 aaPredicted RBP7.85□□□□□ -1.15
ATPAF1-211ENST00000534216 NEUROD4Q9HD90 331 aa7.85□□□□□ -1.15
ATPAF1-211ENST00000534216 SLURP2P0DP57 97 aa7.84□□□□□ -1.15
ATPAF1-211ENST00000534216 MX2P20592 715 aa7.84□□□□□ -1.15
ATPAF1-211ENST00000534216 SRSF11Q05519 484 aaKnown RBP7.84□□□□□ -1.15
ATPAF1-211ENST00000534216 RTN1Q16799 776 aa7.84□□□□□ -1.15
ATPAF1-211ENST00000534216 VTI1AQ96AJ9 217 aa7.84□□□□□ -1.15
ATPAF1-211ENST00000534216 CXXC1Q9P0U4 656 aaPredicted RBP7.84□□□□□ -1.15
ATPAF1-211ENST00000534216 SLAIN2Q9P270 581 aa7.84□□□□□ -1.15
ATPAF1-211ENST00000534216 DCDC2BA2VCK2 349 aa7.83□□□□□ -1.16
ATPAF1-211ENST00000534216 TMEM88BA6NKF7 163 aa7.83□□□□□ -1.16
ATPAF1-211ENST00000534216 ADAMTS2O95450 1211 aa7.83□□□□□ -1.16
ATPAF1-211ENST00000534216 FAM157BP0CG42 384 aa7.83□□□□□ -1.16
ATPAF1-211ENST00000534216 MAPTP10636 758 aaKnown RBP7.83□□□□□ -1.16
ATPAF1-211ENST00000534216 TNP2Q05952 138 aa7.83□□□□□ -1.16
ATPAF1-211ENST00000534216 ZSCAN1Q8NBB4 408 aa7.83□□□□□ -1.16
ATPAF1-211ENST00000534216 ZNF280CQ8ND82 737 aa7.83□□□□□ -1.16
ATPAF1-211ENST00000534216 HSH2DQ96JZ2 352 aa7.83□□□□□ -1.16
ATPAF1-211ENST00000534216 ANKIB1Q9P2G1 1089 aa7.83□□□□□ -1.16
ATPAF1-211ENST00000534216 HCN2Q9UL51 889 aa7.83□□□□□ -1.16
ATPAF1-211ENST00000534216 IGF1RP08069 1367 aa7.83□□□□□ -1.16
ATPAF1-211ENST00000534216 FGFR3P22607 806 aa7.82□□□□□ -1.16
ATPAF1-211ENST00000534216 SUSD3Q96L08 255 aa7.82□□□□□ -1.16
ATPAF1-211ENST00000534216 QTRT2Q9H974 415 aaKnown RBP7.82□□□□□ -1.16
ATPAF1-211ENST00000534216 NSFL1CQ9UNZ2 370 aaKnown RBP7.82□□□□□ -1.16
ATPAF1-211ENST00000534216 KHNYNO15037 678 aaKnown RBP7.81□□□□□ -1.16
ATPAF1-211ENST00000534216 EFSO43281 561 aa7.81□□□□□ -1.16
ATPAF1-211ENST00000534216 ATP2B4P23634 1241 aa7.81□□□□□ -1.16
ATPAF1-211ENST00000534216 CTBSQ01459 385 aa7.81□□□□□ -1.16
ATPAF1-211ENST00000534216 HIF1AQ16665 826 aa7.81□□□□□ -1.16
ATPAF1-211ENST00000534216 MYO19Q96H55 970 aa7.81□□□□□ -1.16
ATPAF1-211ENST00000534216 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.81□□□□□ -1.16
ATPAF1-211ENST00000534216 MAP2K3P46734 347 aa7.8□□□□□ -1.16
ATPAF1-211ENST00000534216 COL26A1Q96A83 441 aa7.8□□□□□ -1.16
ATPAF1-211ENST00000534216 C2CD2LO14523 706 aa7.79□□□□□ -1.16
ATPAF1-211ENST00000534216 BMP4P12644 408 aa7.79□□□□□ -1.16
ATPAF1-211ENST00000534216 CD33P20138 364 aa7.79□□□□□ -1.16
ATPAF1-211ENST00000534216 LAMC2Q13753 1193 aa7.79□□□□□ -1.16
ATPAF1-211ENST00000534216 FAM182BQ5T319 152 aa7.79□□□□□ -1.16
ATPAF1-211ENST00000534216 IER5Q5VY09 327 aa7.79□□□□□ -1.16
ATPAF1-211ENST00000534216 CAPN12Q6ZSI9 719 aa7.79□□□□□ -1.16
ATPAF1-211ENST00000534216 WHAMMQ8TF30 809 aa7.79□□□□□ -1.16
ATPAF1-211ENST00000534216 MKNK1Q9BUB5 465 aa7.79□□□□□ -1.16
ATPAF1-211ENST00000534216 STRN4Q9NRL3 753 aa7.79□□□□□ -1.16
ATPAF1-211ENST00000534216 KLK14Q9P0G3 267 aa7.79□□□□□ -1.16
ATPAF1-211ENST00000534216 LRFN2Q9ULH4 789 aa7.79□□□□□ -1.16
ATPAF1-211ENST00000534216 BCS1LQ9Y276 419 aa7.79□□□□□ -1.16
ATPAF1-211ENST00000534216 CARNS1A5YM72 827 aa7.78□□□□□ -1.16
ATPAF1-211ENST00000534216 TGFBR3LH3BV60 316 aa7.78□□□□□ -1.16
ATPAF1-211ENST00000534216 TYRO3Q06418 890 aa7.78□□□□□ -1.16
ATPAF1-211ENST00000534216 DGKZQ13574 1117 aa7.78□□□□□ -1.16
ATPAF1-211ENST00000534216 COX20Q5RI15 118 aa7.78□□□□□ -1.16
ATPAF1-211ENST00000534216 ZNF385CQ66K41 422 aaPredicted RBP7.78□□□□□ -1.16
ATPAF1-211ENST00000534216 BTLAQ7Z6A9 289 aa7.78□□□□□ -1.16
ATPAF1-211ENST00000534216 ACDQ96AP0 544 aa7.78□□□□□ -1.16
ATPAF1-211ENST00000534216 CEP63Q96MT8 703 aa7.78□□□□□ -1.16
ATPAF1-211ENST00000534216 MARK1Q9P0L2 795 aa7.78□□□□□ -1.16
ATPAF1-211ENST00000534216 SFSWAPQ12872 951 aaKnown RBP7.77□□□□□ -1.17
ATPAF1-211ENST00000534216 C11orf91Q3C1V1 193 aa7.77□□□□□ -1.17
ATPAF1-211ENST00000534216 LYPD4Q6UWN0 246 aa7.77□□□□□ -1.17
ATPAF1-211ENST00000534216 SAP130Q9H0E3 1048 aa7.77□□□□□ -1.17
ATPAF1-211ENST00000534216 BRD7Q9NPI1 651 aa7.77□□□□□ -1.17
ATPAF1-211ENST00000534216 DMGDHQ9UI17 866 aaKnown RBP7.77□□□□□ -1.17
ATPAF1-211ENST00000534216 USTQ9Y2C2 406 aa7.77□□□□□ -1.17
ATPAF1-211ENST00000534216 PTCD1O75127 700 aaKnown RBP7.76□□□□□ -1.17
ATPAF1-211ENST00000534216 CELA2BP08218 269 aaPredicted RBP7.76□□□□□ -1.17
ATPAF1-211ENST00000534216 SSFA2P28290 1259 aa7.76□□□□□ -1.17
ATPAF1-211ENST00000534216 C16orf46Q6P387 395 aa7.76□□□□□ -1.17
ATPAF1-211ENST00000534216 OXCT2Q9BYC2 517 aaPredicted RBP7.76□□□□□ -1.17
ATPAF1-211ENST00000534216 KCNQ4P56696 695 aa7.75□□□□□ -1.17
ATPAF1-211ENST00000534216 NAA30Q147X3 362 aaPredicted RBP7.75□□□□□ -1.17
ATPAF1-211ENST00000534216 GRIN2CQ14957 1233 aa7.75□□□□□ -1.17
ATPAF1-211ENST00000534216 SVOPQ8N4V2 548 aa7.75□□□□□ -1.17
ATPAF1-211ENST00000534216 ARAFP10398 606 aa7.74□□□□□ -1.17
ATPAF1-211ENST00000534216 BCRP11274 1271 aa7.74□□□□□ -1.17
ATPAF1-211ENST00000534216 RETREG2Q8NC44 543 aa7.74□□□□□ -1.17
ATPAF1-211ENST00000534216 IFT43Q96FT9 208 aa7.74□□□□□ -1.17
ATPAF1-211ENST00000534216 SEPT3Q9UH03 358 aa7.74□□□□□ -1.17
ATPAF1-211ENST00000534216 KCNH4Q9UQ05 1017 aa7.74□□□□□ -1.17
ATPAF1-211ENST00000534216 FAM181BA6NEQ2 426 aa7.73□□□□□ -1.17
ATPAF1-211ENST00000534216 MICAL2O94851 1124 aa7.73□□□□□ -1.17
ATPAF1-211ENST00000534216 ARHGEF15O94989 841 aa7.73□□□□□ -1.17
ATPAF1-211ENST00000534216 SCNN1AP37088 669 aa7.73□□□□□ -1.17
ATPAF1-211ENST00000534216 IDH3AP50213 366 aa7.73□□□□□ -1.17
ATPAF1-211ENST00000534216 PHLDB3Q6NSJ2 640 aa7.73□□□□□ -1.17
ATPAF1-211ENST00000534216 GOLGA6L1Q8N7Z2 621 aa7.73□□□□□ -1.17
ATPAF1-211ENST00000534216 AVENQ9NQS1 362 aaPredicted RBP7.73□□□□□ -1.17
ATPAF1-211ENST00000534216 LRRC4BQ9NT99 713 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms