RNA–Protein interactions for RNA: ENST00000533957.1

CLNS1A-212, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 4

Gene CLNS1A, Length 369 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-212ENST00000533957 SLCO4C1Q6ZQN7 724 aa8.52□□□□□ -1.05
CLNS1A-212ENST00000533957 KIF27Q86VH2 1401 aa8.52□□□□□ -1.05
CLNS1A-212ENST00000533957 RUSC2Q8N2Y8 1516 aa8.51□□□□□ -1.05
CLNS1A-212ENST00000533957 LZTS3O60299 673 aaPredicted RBP8.51□□□□□ -1.05
CLNS1A-212ENST00000533957 ARAFP10398 606 aa8.51□□□□□ -1.05
CLNS1A-212ENST00000533957 EPXP11678 715 aa8.51□□□□□ -1.05
CLNS1A-212ENST00000533957 TNP2Q05952 138 aa8.51□□□□□ -1.05
CLNS1A-212ENST00000533957 LINC00114Q6XXX2 140 aa8.51□□□□□ -1.05
CLNS1A-212ENST00000533957 BTBD6Q96KE9 485 aa8.51□□□□□ -1.05
CLNS1A-212ENST00000533957 HCN2Q9UL51 889 aa8.51□□□□□ -1.05
CLNS1A-212ENST00000533957 USP3Q9Y6I4 520 aa8.51□□□□□ -1.05
CLNS1A-212ENST00000533957 CEP170Q5SW79 1584 aa8.51□□□□□ -1.05
CLNS1A-212ENST00000533957 PRXQ9BXM0 1461 aa8.51□□□□□ -1.05
CLNS1A-212ENST00000533957 RIMBP3CA6NJZ7 1639 aa8.51□□□□□ -1.05
CLNS1A-212ENST00000533957 RIMBP3BA6NNM3 1639 aa8.51□□□□□ -1.05
CLNS1A-212ENST00000533957 RIMBP3Q9UFD9 1639 aa8.51□□□□□ -1.05
CLNS1A-212ENST00000533957 KRBA1A5PL33 1030 aa8.5□□□□□ -1.05
CLNS1A-212ENST00000533957 PROCP04070 461 aa8.5□□□□□ -1.05
CLNS1A-212ENST00000533957 MAPTP10636 758 aaKnown RBP8.5□□□□□ -1.05
CLNS1A-212ENST00000533957 SKIP12755 728 aa8.5□□□□□ -1.05
CLNS1A-212ENST00000533957 AMPD1P23109 780 aa8.5□□□□□ -1.05
CLNS1A-212ENST00000533957 COL8A1P27658 744 aa8.5□□□□□ -1.05
CLNS1A-212ENST00000533957 EML3Q32P44 896 aa8.5□□□□□ -1.05
CLNS1A-212ENST00000533957 NBPF1Q3BBV0 1214 aa8.5□□□□□ -1.05
CLNS1A-212ENST00000533957 ZIC5Q96T25 663 aa8.5□□□□□ -1.05
CLNS1A-212ENST00000533957 CABP1Q9NZU7 370 aa8.5□□□□□ -1.05
CLNS1A-212ENST00000533957 NOD1Q9Y239 953 aa8.5□□□□□ -1.05
CLNS1A-212ENST00000533957 GRIN2AQ12879 1464 aa8.5□□□□□ -1.05
CLNS1A-212ENST00000533957 NEURL1BA8MQ27 555 aa8.49□□□□□ -1.05
CLNS1A-212ENST00000533957 BACH1O14867 736 aa8.49□□□□□ -1.05
CLNS1A-212ENST00000533957 TATP17735 454 aaPredicted RBP8.49□□□□□ -1.05
CLNS1A-212ENST00000533957 NFATC2IPQ8NCF5 419 aa8.49□□□□□ -1.05
CLNS1A-212ENST00000533957 ZDHHC3Q9NYG2 299 aa8.49□□□□□ -1.05
CLNS1A-212ENST00000533957 SHROOM2Q13796 1616 aa8.49□□□□□ -1.05
CLNS1A-212ENST00000533957 CTTNBP2Q8WZ74 1663 aa8.49□□□□□ -1.05
CLNS1A-212ENST00000533957 PRKCSHP14314 528 aaPredicted RBP8.48□□□□□ -1.05
CLNS1A-212ENST00000533957 GTF2IP78347 998 aa8.48□□□□□ -1.05
CLNS1A-212ENST00000533957 FAM182BQ5T319 152 aa8.48□□□□□ -1.05
CLNS1A-212ENST00000533957 ALYREFQ86V81 257 aaKnown RBP8.48□□□□□ -1.05
CLNS1A-212ENST00000533957 KLF15Q9UIH9 416 aa8.48□□□□□ -1.05
CLNS1A-212ENST00000533957 PARP3Q9Y6F1 533 aa8.48□□□□□ -1.05
CLNS1A-212ENST00000533957 DCDC2BA2VCK2 349 aa8.47□□□□□ -1.05
CLNS1A-212ENST00000533957 CD33P20138 364 aa8.47□□□□□ -1.05
CLNS1A-212ENST00000533957 DIEXFQ68CQ4 756 aaKnown RBP8.47□□□□□ -1.05
CLNS1A-212ENST00000533957 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.47□□□□□ -1.05
CLNS1A-212ENST00000533957 SCHIP1Q9P0W5 487 aaPredicted RBP8.47□□□□□ -1.05
CLNS1A-212ENST00000533957 MAP3K1Q13233 1512 aa8.47□□□□□ -1.05
CLNS1A-212ENST00000533957 FHAD1B1AJZ9 1412 aa8.46□□□□□ -1.05
CLNS1A-212ENST00000533957 KHNYNO15037 678 aaKnown RBP8.46□□□□□ -1.06
CLNS1A-212ENST00000533957 NCOA4Q13772 614 aa8.46□□□□□ -1.06
CLNS1A-212ENST00000533957 POM121Q96HA1 1249 aa8.46□□□□□ -1.06
CLNS1A-212ENST00000533957 SUV39H2Q9H5I1 410 aa8.46□□□□□ -1.06
CLNS1A-212ENST00000533957 ZNF358Q9NW07 568 aa8.46□□□□□ -1.06
CLNS1A-212ENST00000533957 ARHGEF11O15085 1522 aa8.45□□□□□ -1.06
CLNS1A-212ENST00000533957 ADAM23O75077 832 aa8.45□□□□□ -1.06
CLNS1A-212ENST00000533957 PSME1Q06323 249 aa8.45□□□□□ -1.06
CLNS1A-212ENST00000533957 WWC1Q8IX03 1113 aa8.45□□□□□ -1.06
CLNS1A-212ENST00000533957 DEPDC4Q8N2C3 294 aa8.45□□□□□ -1.06
CLNS1A-212ENST00000533957 AVENQ9NQS1 362 aaPredicted RBP8.45□□□□□ -1.06
CLNS1A-212ENST00000533957 GJA3Q9Y6H8 435 aa8.45□□□□□ -1.06
CLNS1A-212ENST00000533957 ACIN1Q9UKV3 1341 aaKnown RBP8.45□□□□□ -1.06
CLNS1A-212ENST00000533957 NUP160Q12769 1436 aa8.45□□□□□ -1.06
CLNS1A-212ENST00000533957 PIK3R2O00459 728 aa8.44□□□□□ -1.06
CLNS1A-212ENST00000533957 GNB5O14775 395 aa8.44□□□□□ -1.06
CLNS1A-212ENST00000533957 FAM157BP0CG42 384 aa8.44□□□□□ -1.06
CLNS1A-212ENST00000533957 ADH6P28332 368 aa8.44□□□□□ -1.06
CLNS1A-212ENST00000533957 TXLNAP40222 546 aa8.44□□□□□ -1.06
CLNS1A-212ENST00000533957 GRIN2CQ14957 1233 aa8.44□□□□□ -1.06
CLNS1A-212ENST00000533957 SAMD5Q5TGI4 173 aa8.44□□□□□ -1.06
CLNS1A-212ENST00000533957 BICDL1Q6ZP65 573 aa8.44□□□□□ -1.06
CLNS1A-212ENST00000533957 ZDHHC1Q8WTX9 485 aa8.44□□□□□ -1.06
CLNS1A-212ENST00000533957 L3MBTL2Q969R5 705 aa8.44□□□□□ -1.06
CLNS1A-212ENST00000533957 TIMELESSQ9UNS1 1208 aa8.44□□□□□ -1.06
CLNS1A-212ENST00000533957 NOS2P35228 1153 aa8.43□□□□□ -1.06
CLNS1A-212ENST00000533957 DGKGP49619 791 aa8.43□□□□□ -1.06
CLNS1A-212ENST00000533957 EPHA4P54764 986 aa8.43□□□□□ -1.06
CLNS1A-212ENST00000533957 TEAD4Q15561 434 aa8.43□□□□□ -1.06
CLNS1A-212ENST00000533957 FCHSD1Q86WN1 690 aa8.43□□□□□ -1.06
CLNS1A-212ENST00000533957 STRN4Q9NRL3 753 aa8.43□□□□□ -1.06
CLNS1A-212ENST00000533957 PRR12Q9ULL5 1215 aa8.43□□□□□ -1.06
CLNS1A-212ENST00000533957 USP17L5A8MUK1 530 aa8.42□□□□□ -1.06
CLNS1A-212ENST00000533957 ZBTB7BO15156 539 aaPredicted RBP8.42□□□□□ -1.06
CLNS1A-212ENST00000533957 EFSO43281 561 aa8.42□□□□□ -1.06
CLNS1A-212ENST00000533957 RAD21O60216 631 aa8.42□□□□□ -1.06
CLNS1A-212ENST00000533957 PCBP4P57723 403 aaKnown RBP8.42□□□□□ -1.06
CLNS1A-212ENST00000533957 CHSY3Q70JA7 882 aa8.42□□□□□ -1.06
CLNS1A-212ENST00000533957 TNS4Q8IZW8 715 aa8.42□□□□□ -1.06
CLNS1A-212ENST00000533957 C7orf43Q8WVR3 580 aa8.42□□□□□ -1.06
CLNS1A-212ENST00000533957 MARK1Q9P0L2 795 aa8.42□□□□□ -1.06
CLNS1A-212ENST00000533957 RAPGEF2Q9Y4G8 1499 aa8.42□□□□□ -1.06
CLNS1A-212ENST00000533957 BAG6P46379 1132 aa8.41□□□□□ -1.06
CLNS1A-212ENST00000533957 LAMC2Q13753 1193 aa8.41□□□□□ -1.06
CLNS1A-212ENST00000533957 ZNF468Q5VIY5 522 aaPredicted RBP8.41□□□□□ -1.06
CLNS1A-212ENST00000533957 POM121CA8CG34 1229 aa8.4□□□□□ -1.06
CLNS1A-212ENST00000533957 EML1O00423 815 aa8.4□□□□□ -1.06
CLNS1A-212ENST00000533957 TBCELQ5QJ74 424 aa8.4□□□□□ -1.06
CLNS1A-212ENST00000533957 TRIM50Q86XT4 487 aa8.4□□□□□ -1.06
CLNS1A-212ENST00000533957 SLC9A9Q8IVB4 645 aa8.4□□□□□ -1.06
CLNS1A-212ENST00000533957 ADAMTS19Q8TE59 1207 aa8.4□□□□□ -1.06
CLNS1A-212ENST00000533957 ERCC6L2Q5T890 1561 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms