RNA–Protein interactions for RNA: ENST00000533756.5

PACS1-213, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-213ENST00000533756 NOGQ13253 232 aa12.66□□□□□ -0.38
PACS1-213ENST00000533756 SOS1Q07889 1333 aaPredicted RBP12.65□□□□□ -0.38
PACS1-213ENST00000533756 FZD9O00144 591 aa12.65□□□□□ -0.38
PACS1-213ENST00000533756 POLA2Q14181 598 aa12.65□□□□□ -0.38
PACS1-213ENST00000533756 STYK1Q6J9G0 422 aa12.65□□□□□ -0.38
PACS1-213ENST00000533756 CTU1Q7Z7A3 348 aaKnown RBP12.65□□□□□ -0.38
PACS1-213ENST00000533756 BCL2L12Q9HB09 334 aa12.65□□□□□ -0.38
PACS1-213ENST00000533756 TRAF5O00463 557 aa12.64□□□□□ -0.39
PACS1-213ENST00000533756 AKAP4Q5JQC9 854 aa12.64□□□□□ -0.39
PACS1-213ENST00000533756 PRPF40BQ6NWY9 871 aaKnown RBP12.64□□□□□ -0.39
PACS1-213ENST00000533756 BICDL1Q6ZP65 573 aa12.64□□□□□ -0.39
PACS1-213ENST00000533756 HPS5Q9UPZ3 1129 aa12.64□□□□□ -0.39
PACS1-213ENST00000533756 ROCK2O75116 1388 aaKnown RBP12.64□□□□□ -0.39
PACS1-213ENST00000533756 TRPM7Q96QT4 1865 aa12.63□□□□□ -0.39
PACS1-213ENST00000533756 LMOD1P29536 600 aaPredicted RBP12.63□□□□□ -0.39
PACS1-213ENST00000533756 CABP4P57796 275 aa12.63□□□□□ -0.39
PACS1-213ENST00000533756 FKBP4Q02790 459 aaKnown RBP eCLIP12.63□□□□□ -0.39
PACS1-213ENST00000533756 PKN2Q16513 984 aaKnown RBP12.63□□□□□ -0.39
PACS1-213ENST00000533756 CCDC93Q567U6 631 aa12.63□□□□□ -0.39
PACS1-213ENST00000533756 USP50Q70EL3 339 aaPredicted RBP12.63□□□□□ -0.39
PACS1-213ENST00000533756 SLC17A8Q8NDX2 589 aa12.63□□□□□ -0.39
PACS1-213ENST00000533756 FYB1O15117 783 aa12.62□□□□□ -0.39
PACS1-213ENST00000533756 C7orf43Q8WVR3 580 aa12.62□□□□□ -0.39
PACS1-213ENST00000533756 CELF2O95319 508 aaKnown RBP12.61□□□□□ -0.39
PACS1-213ENST00000533756 ATXN8OSP0DMR3 200 aa12.61□□□□□ -0.39
PACS1-213ENST00000533756 SRGNP10124 158 aa12.61□□□□□ -0.39
PACS1-213ENST00000533756 MASTLQ96GX5 879 aa12.61□□□□□ -0.39
PACS1-213ENST00000533756 EYA1Q99502 592 aa12.61□□□□□ -0.39
PACS1-213ENST00000533756 GGNBP2Q9H3C7 697 aa12.61□□□□□ -0.39
PACS1-213ENST00000533756 ZNF277Q9NRM2 450 aaPredicted RBP12.61□□□□□ -0.39
PACS1-213ENST00000533756 COL15A1P39059 1388 aa12.6□□□□□ -0.39
PACS1-213ENST00000533756 PRR5LQ6MZQ0 368 aa12.6□□□□□ -0.39
PACS1-213ENST00000533756 ZIC5Q96T25 663 aa12.6□□□□□ -0.39
PACS1-213ENST00000533756 ANKRD31Q8N7Z5 1873 aa12.59□□□□□ -0.39
PACS1-213ENST00000533756 RTKN2Q8IZC4 609 aa12.59□□□□□ -0.39
PACS1-213ENST00000533756 SLX4Q8IY92 1834 aa12.59□□□□□ -0.39
PACS1-213ENST00000533756 TJP1Q07157 1748 aa12.59□□□□□ -0.39
PACS1-213ENST00000533756 CYP19A1P11511 503 aaPredicted RBP12.58□□□□□ -0.4
PACS1-213ENST00000533756 IARSP41252 1262 aaKnown RBP12.58□□□□□ -0.4
PACS1-213ENST00000533756 EPS15P42566 896 aa12.58□□□□□ -0.4
PACS1-213ENST00000533756 DNAJC10Q8IXB1 793 aa12.58□□□□□ -0.4
PACS1-213ENST00000533756 JDP2Q8WYK2 163 aa12.58□□□□□ -0.4
PACS1-213ENST00000533756 RNF186Q9NXI6 227 aa12.58□□□□□ -0.4
PACS1-213ENST00000533756 COL11A2P13942 1736 aaPredicted RBP12.57□□□□□ -0.4
PACS1-213ENST00000533756 TRPA1O75762 1119 aa12.57□□□□□ -0.4
PACS1-213ENST00000533756 SCNN1DP51172 638 aa12.57□□□□□ -0.4
PACS1-213ENST00000533756 EIF6P56537 245 aaKnown RBP12.57□□□□□ -0.4
PACS1-213ENST00000533756 NFATC2IPQ8NCF5 419 aa12.57□□□□□ -0.4
PACS1-213ENST00000533756 L3MBTL2Q969R5 705 aa12.57□□□□□ -0.4
PACS1-213ENST00000533756 GJA3Q9Y6H8 435 aa12.57□□□□□ -0.4
PACS1-213ENST00000533756 WASHC2AQ641Q2 1341 aa12.56□□□□□ -0.4
PACS1-213ENST00000533756 ARFGEF2Q9Y6D5 1785 aa12.56□□□□□ -0.4
PACS1-213ENST00000533756 TBC1D9BQ66K14 1250 aa12.55□□□□□ -0.4
PACS1-213ENST00000533756 SYNE4Q8N205 404 aa12.55□□□□□ -0.4
PACS1-213ENST00000533756 CCDC24Q8N4L8 307 aa12.55□□□□□ -0.4
PACS1-213ENST00000533756 PGAP2Q9UHJ9 254 aa12.55□□□□□ -0.4
PACS1-213ENST00000533756 ZBTB1Q9Y2K1 713 aa12.55□□□□□ -0.4
PACS1-213ENST00000533756 EMILIN1Q9Y6C2 1016 aa12.55□□□□□ -0.4
PACS1-213ENST00000533756 A0A087WZG4 1122 aa12.54□□□□□ -0.4
PACS1-213ENST00000533756 ST20-MTHFSA0A0A6YYL1 179 aa12.54□□□□□ -0.4
PACS1-213ENST00000533756 FAM155AB1AL88 458 aaPredicted RBP12.54□□□□□ -0.4
PACS1-213ENST00000533756 MTHFSP49914 203 aa12.54□□□□□ -0.4
PACS1-213ENST00000533756 HUNKP57058 714 aa12.54□□□□□ -0.4
PACS1-213ENST00000533756 ST5P78524 1137 aa12.54□□□□□ -0.4
PACS1-213ENST00000533756 KIF23Q02241 960 aaPredicted RBP12.54□□□□□ -0.4
PACS1-213ENST00000533756 PLEKHO1Q53GL0 409 aaPredicted RBP12.54□□□□□ -0.4
PACS1-213ENST00000533756 CCDC102AQ96A19 550 aa12.54□□□□□ -0.4
PACS1-213ENST00000533756 ADARB2Q9NS39 739 aaKnown RBP12.54□□□□□ -0.4
PACS1-213ENST00000533756 PITPNM2Q9BZ72 1349 aa12.54□□□□□ -0.4
PACS1-213ENST00000533756 RGMBQ6NW40 437 aa12.53□□□□□ -0.4
PACS1-213ENST00000533756 CNBD1Q8NA66 436 aa12.53□□□□□ -0.4
PACS1-213ENST00000533756 GLIS2Q9BZE0 524 aaPredicted RBP12.53□□□□□ -0.4
PACS1-213ENST00000533756 COLQQ9Y215 455 aaPredicted RBP12.53□□□□□ -0.4
PACS1-213ENST00000533756 NPR1P16066 1061 aa12.52□□□□□ -0.41
PACS1-213ENST00000533756 MNX1P50219 401 aaPredicted RBP12.52□□□□□ -0.41
PACS1-213ENST00000533756 AMOTQ4VCS5 1084 aa12.52□□□□□ -0.41
PACS1-213ENST00000533756 CDC37L1Q7L3B6 337 aa12.52□□□□□ -0.41
PACS1-213ENST00000533756 REM2Q8IYK8 340 aaPredicted RBP12.52□□□□□ -0.41
PACS1-213ENST00000533756 ZC3H15Q8WU90 426 aaKnown RBP12.52□□□□□ -0.41
PACS1-213ENST00000533756 PSMD1Q99460 953 aa12.52□□□□□ -0.41
PACS1-213ENST00000533756 ZNF408Q9H9D4 720 aa12.52□□□□□ -0.41
PACS1-213ENST00000533756 HDAC9Q9UKV0 1011 aa12.52□□□□□ -0.41
PACS1-213ENST00000533756 NPHP1O15259 732 aa12.51□□□□□ -0.41
PACS1-213ENST00000533756 PPM1GO15355 546 aaPredicted RBP12.51□□□□□ -0.41
PACS1-213ENST00000533756 EIF5P55010 431 aaKnown RBP12.51□□□□□ -0.41
PACS1-213ENST00000533756 ZNF530Q6P9A1 599 aaPredicted RBP12.51□□□□□ -0.41
PACS1-213ENST00000533756 FBXO46Q6PJ61 603 aaPredicted RBP12.51□□□□□ -0.41
PACS1-213ENST00000533756 SETDB2Q96T68 719 aa12.51□□□□□ -0.41
PACS1-213ENST00000533756 CACNA1SQ13698 1873 aa12.51□□□□□ -0.41
PACS1-213ENST00000533756 SZT2Q5T011 3432 aa12.5□□□□□ -0.41
PACS1-213ENST00000533756 CSRNP1Q96S65 589 aa12.5□□□□□ -0.41
PACS1-213ENST00000533756 GPRC5DQ9NZD1 345 aa12.5□□□□□ -0.41
PACS1-213ENST00000533756 BCORQ6W2J9 1755 aa12.5□□□□□ -0.41
PACS1-213ENST00000533756 KLRG2A4D1S0 409 aaPredicted RBP12.49□□□□□ -0.41
PACS1-213ENST00000533756 SLC24A1O60721 1099 aa12.49□□□□□ -0.41
PACS1-213ENST00000533756 CANXP27824 592 aaKnown RBP12.49□□□□□ -0.41
PACS1-213ENST00000533756 C1orf141Q5JVX7 400 aa12.49□□□□□ -0.41
PACS1-213ENST00000533756 OLFM4Q6UX06 510 aa12.49□□□□□ -0.41
PACS1-213ENST00000533756 VSIG10Q8N0Z9 540 aa12.49□□□□□ -0.41
PACS1-213ENST00000533756 ALDH1B1P30837 517 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms