RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 CAPN15O75808 1086 aa11.61□□□□□ -0.55
COPB1-210ENST00000533533 A1BGP04217 495 aa11.61□□□□□ -0.55
COPB1-210ENST00000533533 PPP2R1AP30153 589 aa11.61□□□□□ -0.55
COPB1-210ENST00000533533 ERFEQ4G0M1 354 aa11.61□□□□□ -0.55
COPB1-210ENST00000533533 CCDC24Q8N4L8 307 aa11.61□□□□□ -0.55
COPB1-210ENST00000533533 FMNL2Q96PY5 1086 aa11.61□□□□□ -0.55
COPB1-210ENST00000533533 SETDB2Q96T68 719 aa11.61□□□□□ -0.55
COPB1-210ENST00000533533 SPINK5Q9NQ38 1064 aaPredicted RBP11.61□□□□□ -0.55
COPB1-210ENST00000533533 CEMIPQ8WUJ3 1361 aa11.6□□□□□ -0.55
COPB1-210ENST00000533533 CAMTA2O94983 1202 aa11.6□□□□□ -0.55
COPB1-210ENST00000533533 NPM2Q86SE8 214 aaKnown RBP11.6□□□□□ -0.55
COPB1-210ENST00000533533 CNBD1Q8NA66 436 aa11.6□□□□□ -0.55
COPB1-210ENST00000533533 ZNF219Q9P2Y4 722 aaPredicted RBP11.6□□□□□ -0.55
COPB1-210ENST00000533533 LTBP3Q9NS15 1303 aa11.6□□□□□ -0.55
COPB1-210ENST00000533533 BCORQ6W2J9 1755 aa11.59□□□□□ -0.55
COPB1-210ENST00000533533 ARFGEF2Q9Y6D5 1785 aa11.59□□□□□ -0.55
COPB1-210ENST00000533533 NPHP1O15259 732 aa11.59□□□□□ -0.55
COPB1-210ENST00000533533 KCNQ3O43525 872 aa11.59□□□□□ -0.55
COPB1-210ENST00000533533 CNKSR1Q969H4 720 aa11.59□□□□□ -0.55
COPB1-210ENST00000533533 PHACTR3Q96KR7 559 aa11.59□□□□□ -0.55
COPB1-210ENST00000533533 TAOK3Q9H2K8 898 aa11.59□□□□□ -0.55
COPB1-210ENST00000533533 BTBD11A6QL63 1104 aa11.58□□□□□ -0.56
COPB1-210ENST00000533533 SRGNP10124 158 aa11.58□□□□□ -0.56
COPB1-210ENST00000533533 ST5P78524 1137 aa11.58□□□□□ -0.56
COPB1-210ENST00000533533 STYK1Q6J9G0 422 aa11.58□□□□□ -0.56
COPB1-210ENST00000533533 DZIP3Q86Y13 1208 aaKnown RBP11.58□□□□□ -0.56
COPB1-210ENST00000533533 TNS4Q8IZW8 715 aa11.58□□□□□ -0.56
COPB1-210ENST00000533533 PRKAR2BP31323 418 aa11.57□□□□□ -0.56
COPB1-210ENST00000533533 SOGA3Q5TF21 947 aa11.57□□□□□ -0.56
COPB1-210ENST00000533533 PRPF40BQ6NWY9 871 aaKnown RBP11.57□□□□□ -0.56
COPB1-210ENST00000533533 MASTLQ96GX5 879 aa11.57□□□□□ -0.56
COPB1-210ENST00000533533 RSPH6AQ9H0K4 717 aa11.57□□□□□ -0.56
COPB1-210ENST00000533533 NUDCQ9Y266 331 aa11.57□□□□□ -0.56
COPB1-210ENST00000533533 USP16Q9Y5T5 823 aa11.57□□□□□ -0.56
COPB1-210ENST00000533533 SCN4AP35499 1836 aa11.56□□□□□ -0.56
COPB1-210ENST00000533533 DDNO94850 711 aaPredicted RBP11.56□□□□□ -0.56
COPB1-210ENST00000533533 HSPA1AP0DMV8 641 aaKnown RBP11.56□□□□□ -0.56
COPB1-210ENST00000533533 HSPA1BP0DMV9 641 aaKnown RBP11.56□□□□□ -0.56
COPB1-210ENST00000533533 PIP4K2AP48426 406 aaPredicted RBP11.56□□□□□ -0.56
COPB1-210ENST00000533533 RALBP1Q15311 655 aa11.56□□□□□ -0.56
COPB1-210ENST00000533533 CHADLQ6NUI6 762 aa11.56□□□□□ -0.56
COPB1-210ENST00000533533 CLEC4GQ6UXB4 293 aa11.56□□□□□ -0.56
COPB1-210ENST00000533533 PRAMEF22A3QJZ6 481 aa11.55□□□□□ -0.56
COPB1-210ENST00000533533 SNRPA1P09661 255 aaKnown RBP11.55□□□□□ -0.56
COPB1-210ENST00000533533 DSG3P32926 999 aa11.55□□□□□ -0.56
COPB1-210ENST00000533533 NBPF5PQ86XG9 351 aaPredicted RBP11.55□□□□□ -0.56
COPB1-210ENST00000533533 C7orf43Q8WVR3 580 aa11.55□□□□□ -0.56
COPB1-210ENST00000533533 CREBZFQ9NS37 354 aa11.55□□□□□ -0.56
COPB1-210ENST00000533533 POTEIP0CG38 1075 aa11.54□□□□□ -0.56
COPB1-210ENST00000533533 POTEJP0CG39 1038 aa11.54□□□□□ -0.56
COPB1-210ENST00000533533 U2AF1L5P0DN76 240 aaPredicted RBP11.54□□□□□ -0.56
COPB1-210ENST00000533533 U2AF1Q01081 240 aaKnown RBP eCLIP11.54□□□□□ -0.56
COPB1-210ENST00000533533 ZNF652Q9Y2D9 606 aa11.54□□□□□ -0.56
COPB1-210ENST00000533533 KLRG2A4D1S0 409 aaPredicted RBP11.53□□□□□ -0.56
COPB1-210ENST00000533533 IQCA1LA6NCM1 817 aa11.53□□□□□ -0.56
COPB1-210ENST00000533533 NPR1P16066 1061 aa11.53□□□□□ -0.56
COPB1-210ENST00000533533 CCDC93Q567U6 631 aa11.53□□□□□ -0.56
COPB1-210ENST00000533533 TPTE2Q6XPS3 522 aa11.53□□□□□ -0.56
COPB1-210ENST00000533533 MCM10Q7L590 875 aa11.53□□□□□ -0.56
COPB1-210ENST00000533533 RTF1Q92541 710 aaKnown RBP11.53□□□□□ -0.56
COPB1-210ENST00000533533 L3MBTL3Q96JM7 780 aaPredicted RBP11.53□□□□□ -0.56
COPB1-210ENST00000533533 MYBBP1AQ9BQG0 1328 aaKnown RBP11.53□□□□□ -0.56
COPB1-210ENST00000533533 NBPF26B4DH59 902 aa11.52□□□□□ -0.57
COPB1-210ENST00000533533 RGL2O15211 777 aa11.52□□□□□ -0.57
COPB1-210ENST00000533533 NBPF10Q6P3W6 841 aaKnown RBP11.52□□□□□ -0.57
COPB1-210ENST00000533533 NBPF15Q8N660 670 aa11.52□□□□□ -0.57
COPB1-210ENST00000533533 MKRN1Q9UHC7 482 aaKnown RBP11.52□□□□□ -0.57
COPB1-210ENST00000533533 NIP7Q9Y221 180 aaKnown RBP eCLIP11.52□□□□□ -0.57
COPB1-210ENST00000533533 HTATSF1O43719 755 aaKnown RBP11.51□□□□□ -0.57
COPB1-210ENST00000533533 FKBP4Q02790 459 aaKnown RBP eCLIP11.51□□□□□ -0.57
COPB1-210ENST00000533533 DCTN1Q14203 1278 aa11.51□□□□□ -0.57
COPB1-210ENST00000533533 LDHDQ86WU2 507 aa11.51□□□□□ -0.57
COPB1-210ENST00000533533 TAF1DQ9H5J8 278 aaPredicted RBP11.51□□□□□ -0.57
COPB1-210ENST00000533533 PRKRIP1Q9H875 184 aaPredicted RBP11.51□□□□□ -0.57
COPB1-210ENST00000533533 ZNF277Q9NRM2 450 aaPredicted RBP11.51□□□□□ -0.57
COPB1-210ENST00000533533 PASKQ96RG2 1323 aa11.51□□□□□ -0.57
COPB1-210ENST00000533533 NUP98P52948 1817 aa11.51□□□□□ -0.57
COPB1-210ENST00000533533 NEFMP07197 916 aa11.5□□□□□ -0.57
COPB1-210ENST00000533533 OLFM4Q6UX06 510 aa11.5□□□□□ -0.57
COPB1-210ENST00000533533 RTKN2Q8IZC4 609 aa11.5□□□□□ -0.57
COPB1-210ENST00000533533 DLG5Q8TDM6 1919 aa11.5□□□□□ -0.57
COPB1-210ENST00000533533 LAMB4A4D0S4 1761 aa11.49□□□□□ -0.57
COPB1-210ENST00000533533 FAM177BA6PVY3 158 aa11.49□□□□□ -0.57
COPB1-210ENST00000533533 ANP32CO43423 234 aa11.49□□□□□ -0.57
COPB1-210ENST00000533533 ALDH1B1P30837 517 aa11.49□□□□□ -0.57
COPB1-210ENST00000533533 TAF7Q15545 349 aaPredicted RBP11.49□□□□□ -0.57
COPB1-210ENST00000533533 HLFQ16534 295 aa11.49□□□□□ -0.57
COPB1-210ENST00000533533 ZNF541Q9H0D2 1346 aa11.49□□□□□ -0.57
COPB1-210ENST00000533533 CNTNAP1P78357 1384 aa11.49□□□□□ -0.57
COPB1-210ENST00000533533 ITGBL1O95965 494 aaPredicted RBP11.48□□□□□ -0.57
COPB1-210ENST00000533533 GTF2E1P29083 439 aaPredicted RBP11.48□□□□□ -0.57
COPB1-210ENST00000533533 EAPPQ56P03 285 aaPredicted RBP11.48□□□□□ -0.57
COPB1-210ENST00000533533 MIS18AQ9NYP9 233 aa11.48□□□□□ -0.57
COPB1-210ENST00000533533 HACL1Q9UJ83 578 aa11.48□□□□□ -0.57
COPB1-210ENST00000533533 ADAMTSL1Q8N6G6 1762 aa11.48□□□□□ -0.57
COPB1-210ENST00000533533 TMEM88BA6NKF7 163 aa11.47□□□□□ -0.57
COPB1-210ENST00000533533 FZD9O00144 591 aa11.47□□□□□ -0.57
COPB1-210ENST00000533533 EPHX2P34913 555 aa11.47□□□□□ -0.57
COPB1-210ENST00000533533 IARSP41252 1262 aaKnown RBP11.47□□□□□ -0.57
COPB1-210ENST00000533533 WDR43Q15061 677 aaKnown RBP eCLIP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms