RNA–Protein interactions for RNA: ENST00000533413.5

CKAP5-212, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best)

Gene CKAP5, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-212ENST00000533413 SCP2P22307 547 aa6.63□□□□□ -1.35
CKAP5-212ENST00000533413 UNC5CLQ8IV45 518 aa6.63□□□□□ -1.35
CKAP5-212ENST00000533413 C8orf37Q96NL8 207 aa6.63□□□□□ -1.35
CKAP5-212ENST00000533413 TMEM51Q9NW97 253 aa6.63□□□□□ -1.35
CKAP5-212ENST00000533413 THSD7AQ9UPZ6 1657 aa6.62□□□□□ -1.35
CKAP5-212ENST00000533413 PARP4Q9UKK3 1724 aaKnown RBP6.62□□□□□ -1.35
CKAP5-212ENST00000533413 TRIM66O15016 1216 aa6.62□□□□□ -1.35
CKAP5-212ENST00000533413 WDHD1O75717 1129 aaPredicted RBP6.62□□□□□ -1.35
CKAP5-212ENST00000533413 PSEN1P49768 467 aa6.62□□□□□ -1.35
CKAP5-212ENST00000533413 ZKSCAN2Q63HK3 967 aa6.62□□□□□ -1.35
CKAP5-212ENST00000533413 C11orf96Q7Z7L8 435 aa6.62□□□□□ -1.35
CKAP5-212ENST00000533413 TBC1D32Q96NH3 1257 aa6.62□□□□□ -1.35
CKAP5-212ENST00000533413 UBA5Q9GZZ9 404 aa6.62□□□□□ -1.35
CKAP5-212ENST00000533413 MAF1Q9H063 256 aa6.62□□□□□ -1.35
CKAP5-212ENST00000533413 USP21Q9UK80 565 aa6.62□□□□□ -1.35
CKAP5-212ENST00000533413 PDZRN3Q9UPQ7 1066 aa6.62□□□□□ -1.35
CKAP5-212ENST00000533413 GLI3P10071 1580 aa6.62□□□□□ -1.35
CKAP5-212ENST00000533413 DCAF8L1A6NGE4 600 aa6.62□□□□□ -1.35
CKAP5-212ENST00000533413 NLRP6P59044 892 aa6.62□□□□□ -1.35
CKAP5-212ENST00000533413 RBM6P78332 1123 aaKnown RBP6.62□□□□□ -1.35
CKAP5-212ENST00000533413 VPS72Q15906 364 aa6.62□□□□□ -1.35
CKAP5-212ENST00000533413 MORC1Q86VD1 984 aa6.62□□□□□ -1.35
CKAP5-212ENST00000533413 SMC5Q8IY18 1101 aa6.62□□□□□ -1.35
CKAP5-212ENST00000533413 KRI1Q8N9T8 703 aaKnown RBP6.62□□□□□ -1.35
CKAP5-212ENST00000533413 TBC1D2Q9BYX2 928 aa6.62□□□□□ -1.35
CKAP5-212ENST00000533413 SLC12A5Q9H2X9 1139 aa6.62□□□□□ -1.35
CKAP5-212ENST00000533413 FAN1Q9Y2M0 1017 aa6.62□□□□□ -1.35
CKAP5-212ENST00000533413 ADAMTS2O95450 1211 aa6.61□□□□□ -1.35
CKAP5-212ENST00000533413 BDNFP23560 247 aa6.61□□□□□ -1.35
CKAP5-212ENST00000533413 ARHGEF1Q92888 912 aaKnown RBP6.61□□□□□ -1.35
CKAP5-212ENST00000533413 RUNDC1Q96C34 613 aa6.61□□□□□ -1.35
CKAP5-212ENST00000533413 CHMP5Q9NZZ3 219 aa6.61□□□□□ -1.35
CKAP5-212ENST00000533413 RGS17Q9UGC6 210 aaPredicted RBP6.61□□□□□ -1.35
CKAP5-212ENST00000533413 CAMTA1Q9Y6Y1 1673 aa6.61□□□□□ -1.35
CKAP5-212ENST00000533413 RGPD5Q99666 1765 aa6.61□□□□□ -1.35
CKAP5-212ENST00000533413 NSD3Q9BZ95 1437 aa6.61□□□□□ -1.35
CKAP5-212ENST00000533413 VGLL3A8MV65 326 aa6.61□□□□□ -1.35
CKAP5-212ENST00000533413 GCP02774 474 aa6.61□□□□□ -1.35
CKAP5-212ENST00000533413 XRCC6P12956 609 aaKnown RBP eCLIP6.61□□□□□ -1.35
CKAP5-212ENST00000533413 RXRBP28702 533 aa6.61□□□□□ -1.35
CKAP5-212ENST00000533413 MCM4P33991 863 aa6.61□□□□□ -1.35
CKAP5-212ENST00000533413 RARSP54136 660 aaKnown RBP6.61□□□□□ -1.35
CKAP5-212ENST00000533413 NBPF20Q3BBV1 942 aa6.61□□□□□ -1.35
CKAP5-212ENST00000533413 ZNF513Q8N8E2 541 aaPredicted RBP6.61□□□□□ -1.35
CKAP5-212ENST00000533413 CXorf38Q8TB03 319 aa6.61□□□□□ -1.35
CKAP5-212ENST00000533413 UBXN4Q92575 508 aa6.61□□□□□ -1.35
CKAP5-212ENST00000533413 RRP7AQ9Y3A4 280 aaKnown RBP6.61□□□□□ -1.35
CKAP5-212ENST00000533413 CTDP1Q9Y5B0 961 aaPredicted RBP6.61□□□□□ -1.35
CKAP5-212ENST00000533413 KIAA0232Q92628 1395 aa6.61□□□□□ -1.35
CKAP5-212ENST00000533413 COG3Q96JB2 828 aa6.61□□□□□ -1.35
CKAP5-212ENST00000533413 CFAP53Q96M91 514 aa6.61□□□□□ -1.35
CKAP5-212ENST00000533413 ANTXR1Q9H6X2 564 aa6.61□□□□□ -1.35
CKAP5-212ENST00000533413 PRDM11Q9NQV5 511 aa6.61□□□□□ -1.35
CKAP5-212ENST00000533413 COL5A2P05997 1499 aaPredicted RBP6.6□□□□□ -1.35
CKAP5-212ENST00000533413 TNNT2P45379 298 aaPredicted RBP6.6□□□□□ -1.35
CKAP5-212ENST00000533413 RIPK4P57078 832 aa6.6□□□□□ -1.35
CKAP5-212ENST00000533413 TSR1Q2NL82 804 aaKnown RBP6.6□□□□□ -1.35
CKAP5-212ENST00000533413 HSCBQ8IWL3 235 aa6.6□□□□□ -1.35
CKAP5-212ENST00000533413 G3BP2Q9UN86 482 aaKnown RBP6.6□□□□□ -1.35
CKAP5-212ENST00000533413 THRAP3Q9Y2W1 955 aaKnown RBP6.6□□□□□ -1.35
CKAP5-212ENST00000533413 PCDHB15Q9Y5E8 787 aa6.6□□□□□ -1.35
CKAP5-212ENST00000533413 PLEKHG2Q9H7P9 1386 aa6.6□□□□□ -1.35
CKAP5-212ENST00000533413 CCDC189A1A4V9 331 aa6.6□□□□□ -1.35
CKAP5-212ENST00000533413 WDR63Q8IWG1 891 aa6.6□□□□□ -1.35
CKAP5-212ENST00000533413 TSPAN18Q96SJ8 248 aa6.6□□□□□ -1.35
CKAP5-212ENST00000533413 BCL2L13Q9BXK5 485 aa6.6□□□□□ -1.35
CKAP5-212ENST00000533413 C22orf23Q9BZE7 217 aa6.6□□□□□ -1.35
CKAP5-212ENST00000533413 ISY1Q9ULR0 285 aaKnown RBP6.6□□□□□ -1.35
CKAP5-212ENST00000533413 FAM83GA6ND36 823 aa6.59□□□□□ -1.35
CKAP5-212ENST00000533413 STK10O94804 968 aaKnown RBP6.59□□□□□ -1.35
CKAP5-212ENST00000533413 ZNF16P17020 682 aaPredicted RBP6.59□□□□□ -1.35
CKAP5-212ENST00000533413 NAALADL2Q58DX5 795 aa6.59□□□□□ -1.35
CKAP5-212ENST00000533413 DDX46Q7L014 1031 aaKnown RBP6.59□□□□□ -1.35
CKAP5-212ENST00000533413 MTERF4Q7Z6M4 381 aaKnown RBP6.59□□□□□ -1.35
CKAP5-212ENST00000533413 TCP11L2Q8N4U5 519 aa6.59□□□□□ -1.35
CKAP5-212ENST00000533413 QTRT2Q9H974 415 aaKnown RBP6.59□□□□□ -1.35
CKAP5-212ENST00000533413 GNL3LQ9NVN8 582 aaKnown RBP6.59□□□□□ -1.35
CKAP5-212ENST00000533413 CRB1P82279 1406 aa6.59□□□□□ -1.35
CKAP5-212ENST00000533413 RGS12O14924 1447 aa6.59□□□□□ -1.35
CKAP5-212ENST00000533413 GYS2P54840 703 aa6.59□□□□□ -1.35
CKAP5-212ENST00000533413 WDR78Q5VTH9 848 aa6.59□□□□□ -1.35
CKAP5-212ENST00000533413 LARGE2Q8N3Y3 721 aa6.59□□□□□ -1.35
CKAP5-212ENST00000533413 OTUD6BQ8N6M0 293 aa6.59□□□□□ -1.35
CKAP5-212ENST00000533413 CABLES1Q8TDN4 633 aa6.59□□□□□ -1.35
CKAP5-212ENST00000533413 CARD10Q9BWT7 1032 aa6.59□□□□□ -1.35
CKAP5-212ENST00000533413 CHPF2Q9P2E5 772 aa6.59□□□□□ -1.35
CKAP5-212ENST00000533413 ERBB4Q15303 1308 aa6.59□□□□□ -1.35
CKAP5-212ENST00000533413 MAP2P11137 1827 aaKnown RBP6.59□□□□□ -1.35
CKAP5-212ENST00000533413 RGPD1P0DJD0 1748 aa6.59□□□□□ -1.36
CKAP5-212ENST00000533413 DDX11L8A8MPP1 907 aa6.58□□□□□ -1.36
CKAP5-212ENST00000533413 KIF20AO95235 890 aa6.58□□□□□ -1.36
CKAP5-212ENST00000533413 MRE11P49959 708 aa6.58□□□□□ -1.36
CKAP5-212ENST00000533413 NOM1Q5C9Z4 860 aaKnown RBP6.58□□□□□ -1.36
CKAP5-212ENST00000533413 POTEAQ6S8J7 498 aa6.58□□□□□ -1.36
CKAP5-212ENST00000533413 ARHGEF25Q86VW2 580 aa6.58□□□□□ -1.36
CKAP5-212ENST00000533413 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.58□□□□□ -1.36
CKAP5-212ENST00000533413 GJD4Q96KN9 370 aaPredicted RBP6.58□□□□□ -1.36
CKAP5-212ENST00000533413 CARD14Q9BXL6 1004 aa6.58□□□□□ -1.36
CKAP5-212ENST00000533413 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.58□□□□□ -1.365e-7■■■■■ 26.8
CKAP5-212ENST00000533413 NRBP1Q9UHY1 535 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms