RNA–Protein interactions for RNA: ENST00000533408.1

PTP4A2-215, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 376 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-215ENST00000533408 BCL2L13Q9BXK5 485 aa26.88■■□□□ 1.89
PTP4A2-215ENST00000533408 API5Q9BZZ5 524 aaKnown RBP26.88■■□□□ 1.89
PTP4A2-215ENST00000533408 MAP3K15Q6ZN16 1313 aa26.88■■□□□ 1.89
PTP4A2-215ENST00000533408 KSR2Q6VAB6 950 aa26.87■■□□□ 1.89
PTP4A2-215ENST00000533408 TBC1D2BQ9UPU7 963 aa26.87■■□□□ 1.89
PTP4A2-215ENST00000533408 PNPLA7Q6ZV29 1317 aa26.86■■□□□ 1.89
PTP4A2-215ENST00000533408 MYH14Q7Z406 1995 aaKnown RBP26.86■■□□□ 1.89
PTP4A2-215ENST00000533408 BCAR3O75815 825 aa26.85■■□□□ 1.89
PTP4A2-215ENST00000533408 NEXNQ0ZGT2 675 aa26.85■■□□□ 1.89
PTP4A2-215ENST00000533408 ZKSCAN2Q63HK3 967 aa26.85■■□□□ 1.89
PTP4A2-215ENST00000533408 COL23A1Q86Y22 540 aaPredicted RBP26.85■■□□□ 1.89
PTP4A2-215ENST00000533408 NLGN1Q8N2Q7 840 aa26.85■■□□□ 1.89
PTP4A2-215ENST00000533408 NOB1Q9ULX3 412 aaKnown RBP26.85■■□□□ 1.89
PTP4A2-215ENST00000533408 USP42Q9H9J4 1324 aaKnown RBP26.85■■□□□ 1.89
PTP4A2-215ENST00000533408 TTLL7Q6ZT98 887 aa26.84■■□□□ 1.89
PTP4A2-215ENST00000533408 FRAT1Q92837 279 aaPredicted RBP26.84■■□□□ 1.89
PTP4A2-215ENST00000533408 G2E3Q7L622 706 aa26.83■■□□□ 1.89
PTP4A2-215ENST00000533408 PI4KAP2A4QPH2 592 aa26.82■■□□□ 1.88
PTP4A2-215ENST00000533408 CAMTA2O94983 1202 aa26.82■■□□□ 1.88
PTP4A2-215ENST00000533408 GIGYF2Q6Y7W6 1299 aaKnown RBP26.82■■□□□ 1.88
PTP4A2-215ENST00000533408 PI4KAP1Q8N8J0 262 aa26.82■■□□□ 1.88
PTP4A2-215ENST00000533408 UBR3Q6ZT12 1888 aa26.81■■□□□ 1.88
PTP4A2-215ENST00000533408 R3HDM1Q15032 1099 aaKnown RBP26.81■■□□□ 1.88
PTP4A2-215ENST00000533408 USPL1Q5W0Q7 1092 aa26.81■■□□□ 1.88
PTP4A2-215ENST00000533408 ATF7IPQ6VMQ6 1270 aa26.81■■□□□ 1.88
PTP4A2-215ENST00000533408 ZBTB3Q9H5J0 574 aa26.81■■□□□ 1.88
PTP4A2-215ENST00000533408 DNAAF4Q8WXU2 420 aa26.8■■□□□ 1.88
PTP4A2-215ENST00000533408 MAP3K2Q9Y2U5 619 aa26.8■■□□□ 1.88
PTP4A2-215ENST00000533408 AMIGO3Q86WK7 504 aa26.79■■□□□ 1.88
PTP4A2-215ENST00000533408 METTL22Q9BUU2 404 aaPredicted RBP26.79■■□□□ 1.88
PTP4A2-215ENST00000533408 QSER1Q2KHR3 1735 aa26.79■■□□□ 1.88
PTP4A2-215ENST00000533408 TCIRG1Q13488 830 aa26.78■■□□□ 1.88
PTP4A2-215ENST00000533408 GYS1P13807 737 aa26.76■■□□□ 1.87
PTP4A2-215ENST00000533408 FTSJ3Q8IY81 847 aaKnown RBP26.76■■□□□ 1.87
PTP4A2-215ENST00000533408 SETDB2Q96T68 719 aa26.76■■□□□ 1.87
PTP4A2-215ENST00000533408 SRP68Q9UHB9 627 aaKnown RBP26.76■■□□□ 1.87
PTP4A2-215ENST00000533408 CCT4P50991 539 aaKnown RBP26.75■■□□□ 1.87
PTP4A2-215ENST00000533408 TRIM28Q13263 835 aaKnown RBP26.75■■□□□ 1.87
PTP4A2-215ENST00000533408 PARP10Q53GL7 1025 aa26.75■■□□□ 1.87
PTP4A2-215ENST00000533408 SMIM5Q71RC9 77 aa26.75■■□□□ 1.87
PTP4A2-215ENST00000533408 LINS1Q8NG48 757 aa26.75■■□□□ 1.87
PTP4A2-215ENST00000533408 SLC4A10Q6U841 1118 aa26.74■■□□□ 1.87
PTP4A2-215ENST00000533408 ADCY9O60503 1353 aa26.73■■□□□ 1.87
PTP4A2-215ENST00000533408 TRIM27P14373 513 aa26.73■■□□□ 1.87
PTP4A2-215ENST00000533408 PDE3AQ14432 1141 aa26.73■■□□□ 1.87
PTP4A2-215ENST00000533408 HLFQ16534 295 aa26.73■■□□□ 1.87
PTP4A2-215ENST00000533408 DZIP1LQ8IYY4 767 aaKnown RBP26.73■■□□□ 1.87
PTP4A2-215ENST00000533408 MTFR1LQ9H019 292 aa26.73■■□□□ 1.87
PTP4A2-215ENST00000533408 ALDH1L1O75891 902 aa26.72■■□□□ 1.87
PTP4A2-215ENST00000533408 ZNF34Q8IZ26 560 aa26.72■■□□□ 1.87
PTP4A2-215ENST00000533408 CCDC191Q8NCU4 936 aa26.72■■□□□ 1.87
PTP4A2-215ENST00000533408 MYD88Q99836 296 aa26.72■■□□□ 1.87
PTP4A2-215ENST00000533408 SRCIN1Q9C0H9 1055 aa26.72■■□□□ 1.87
PTP4A2-215ENST00000533408 NIP7Q9Y221 180 aaKnown RBP eCLIP26.72■■□□□ 1.87
PTP4A2-215ENST00000533408 ATP10DQ9P241 1426 aa26.72■■□□□ 1.87
PTP4A2-215ENST00000533408 FKBP8Q14318 412 aa26.71■■□□□ 1.87
PTP4A2-215ENST00000533408 PPP1R42Q7Z4L9 355 aa26.71■■□□□ 1.87
PTP4A2-215ENST00000533408 CHMP4BQ9H444 224 aaKnown RBP26.71■■□□□ 1.87
PTP4A2-215ENST00000533408 BCL2L12Q9HB09 334 aa26.71■■□□□ 1.87
PTP4A2-215ENST00000533408 PSDA5PKW4 1024 aaPredicted RBP26.7■■□□□ 1.86
PTP4A2-215ENST00000533408 F6X3S4 739 aa26.7■■□□□ 1.86
PTP4A2-215ENST00000533408 HSP90B1P14625 803 aaKnown RBP26.7■■□□□ 1.86
PTP4A2-215ENST00000533408 RRP1P56182 461 aaKnown RBP26.7■■□□□ 1.86
PTP4A2-215ENST00000533408 ISCA1Q9BUE6 129 aa26.7■■□□□ 1.86
PTP4A2-215ENST00000533408 NYXQ9GZU5 481 aa26.7■■□□□ 1.86
PTP4A2-215ENST00000533408 HDAC5Q9UQL6 1122 aa26.7■■□□□ 1.86
PTP4A2-215ENST00000533408 PXDNLA1KZ92 1463 aa26.69■■□□□ 1.86
PTP4A2-215ENST00000533408 POLD1P28340 1107 aa26.69■■□□□ 1.86
PTP4A2-215ENST00000533408 CWC25Q9NXE8 425 aaPredicted RBP26.69■■□□□ 1.86
PTP4A2-215ENST00000533408 PARP3Q9Y6F1 533 aa26.69■■□□□ 1.86
PTP4A2-215ENST00000533408 RNF123Q5XPI4 1314 aa26.68■■□□□ 1.86
PTP4A2-215ENST00000533408 TM4SF1P30408 202 aa26.68■■□□□ 1.86
PTP4A2-215ENST00000533408 BEND3Q5T5X7 828 aa26.68■■□□□ 1.86
PTP4A2-215ENST00000533408 TBC1D9BQ66K14 1250 aa26.68■■□□□ 1.86
PTP4A2-215ENST00000533408 INTS3Q68E01 1043 aaKnown RBP26.68■■□□□ 1.86
PTP4A2-215ENST00000533408 TPTE2Q6XPS3 522 aa26.68■■□□□ 1.86
PTP4A2-215ENST00000533408 CARMIL3Q8ND23 1372 aa26.68■■□□□ 1.86
PTP4A2-215ENST00000533408 IBTKQ9P2D0 1353 aaPredicted RBP26.68■■□□□ 1.86
PTP4A2-215ENST00000533408 C4AP0C0L4 1744 aa26.68■■□□□ 1.86
PTP4A2-215ENST00000533408 ABCC4O15439 1325 aa26.67■■□□□ 1.86
PTP4A2-215ENST00000533408 NPHP1O15259 732 aa26.67■■□□□ 1.86
PTP4A2-215ENST00000533408 NFIXQ14938 502 aa26.67■■□□□ 1.86
PTP4A2-215ENST00000533408 BICDL1Q6ZP65 573 aa26.67■■□□□ 1.86
PTP4A2-215ENST00000533408 SUPT16HQ9Y5B9 1047 aaKnown RBP26.67■■□□□ 1.86
PTP4A2-215ENST00000533408 TUBGCP6Q96RT7 1819 aa26.67■■□□□ 1.86
PTP4A2-215ENST00000533408 SCN7AQ01118 1682 aa26.66■■□□□ 1.86
PTP4A2-215ENST00000533408 ATP5J2-PTCD1G3V325 749 aa26.66■■□□□ 1.86
PTP4A2-215ENST00000533408 CLUAP1Q96AJ1 413 aa26.66■■□□□ 1.86
PTP4A2-215ENST00000533408 NEURL1BA8MQ27 555 aa26.65■■□□□ 1.86
PTP4A2-215ENST00000533408 GPTP24298 496 aa26.65■■□□□ 1.86
PTP4A2-215ENST00000533408 GTF2E1P29083 439 aaPredicted RBP26.65■■□□□ 1.86
PTP4A2-215ENST00000533408 NLRP10Q86W26 655 aa26.65■■□□□ 1.86
PTP4A2-215ENST00000533408 NBPF5PQ86XG9 351 aaPredicted RBP26.65■■□□□ 1.86
PTP4A2-215ENST00000533408 UTP14AQ9BVJ6 771 aaKnown RBP26.65■■□□□ 1.86
PTP4A2-215ENST00000533408 BCORQ6W2J9 1755 aa26.65■■□□□ 1.86
PTP4A2-215ENST00000533408 MMP10P09238 476 aa26.64■■□□□ 1.86
PTP4A2-215ENST00000533408 PLIN1O60240 522 aa26.63■■□□□ 1.85
PTP4A2-215ENST00000533408 IGKV5-2P06315 115 aa26.63■■□□□ 1.85
PTP4A2-215ENST00000533408 GCKRQ14397 625 aa26.63■■□□□ 1.85
PTP4A2-215ENST00000533408 SPON1Q9HCB6 807 aa26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms