RNA–Protein interactions for RNA: ENST00000533402.5

CSRP1-218, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 8,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-218ENST00000533402 STIM1Q13586 685 aa9.06□□□□□ -0.96
CSRP1-218ENST00000533402 DNAJC21Q5F1R6 531 aaKnown RBP9.06□□□□□ -0.96
CSRP1-218ENST00000533402 TTC12Q9H892 705 aaPredicted RBP9.06□□□□□ -0.96
CSRP1-218ENST00000533402 INPP5BP32019 993 aa9.06□□□□□ -0.96
CSRP1-218ENST00000533402 BAG4O95429 457 aaKnown RBP9.06□□□□□ -0.96
CSRP1-218ENST00000533402 RBM27Q9P2N5 1060 aaKnown RBP9.06□□□□□ -0.96
CSRP1-218ENST00000533402 CYP46A1Q9Y6A2 500 aa9.06□□□□□ -0.96
CSRP1-218ENST00000533402 SSBP05455 408 aaKnown RBP eCLIP9.06□□□□□ -0.96
CSRP1-218ENST00000533402 ANKRD1Q15327 319 aa9.06□□□□□ -0.96
CSRP1-218ENST00000533402 B4GALNT4Q76KP1 1039 aa9.06□□□□□ -0.96
CSRP1-218ENST00000533402 DDX46Q7L014 1031 aaKnown RBP9.06□□□□□ -0.96
CSRP1-218ENST00000533402 GOPCQ9HD26 462 aa9.06□□□□□ -0.96
CSRP1-218ENST00000533402 STAMBPO95630 424 aa9.06□□□□□ -0.96
CSRP1-218ENST00000533402 SYCP1Q15431 976 aa9.06□□□□□ -0.96
CSRP1-218ENST00000533402 BUB1BO60566 1050 aaPredicted RBP9.05□□□□□ -0.96
CSRP1-218ENST00000533402 HLTFQ14527 1009 aaKnown RBP eCLIP9.05□□□□□ -0.96
CSRP1-218ENST00000533402 CCDC12Q8WUD4 166 aaPredicted RBP9.05□□□□□ -0.96
CSRP1-218ENST00000533402 SART3Q15020 963 aaKnown RBP9.05□□□□□ -0.96
CSRP1-218ENST00000533402 LMNTD2Q8IXW0 634 aa9.05□□□□□ -0.96
CSRP1-218ENST00000533402 NOL7Q9UMY1 257 aaKnown RBP9.05□□□□□ -0.96
CSRP1-218ENST00000533402 OPA1O60313 960 aa9.05□□□□□ -0.96
CSRP1-218ENST00000533402 CCDC172P0C7W6 258 aa9.05□□□□□ -0.96
CSRP1-218ENST00000533402 SPA17Q15506 151 aa9.05□□□□□ -0.96
CSRP1-218ENST00000533402 DBN1Q16643 649 aa9.05□□□□□ -0.96
CSRP1-218ENST00000533402 WHAMMP3Q1A5X7 153 aa9.05□□□□□ -0.96
CSRP1-218ENST00000533402 ZNF428Q96B54 188 aa9.05□□□□□ -0.96
CSRP1-218ENST00000533402 NSRP1Q9H0G5 558 aaKnown RBP9.05□□□□□ -0.96
CSRP1-218ENST00000533402 NAA15Q9BXJ9 866 aaKnown RBP9.05□□□□□ -0.96
CSRP1-218ENST00000533402 KDM5DQ9BY66 1539 aa9.05□□□□□ -0.96
CSRP1-218ENST00000533402 PHACTR2O75167 634 aa9.05□□□□□ -0.96
CSRP1-218ENST00000533402 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.05□□□□□ -0.96
CSRP1-218ENST00000533402 CCDC150Q8NCX0 1101 aa9.05□□□□□ -0.96
CSRP1-218ENST00000533402 TRAK1Q9UPV9 953 aa9.05□□□□□ -0.96
CSRP1-218ENST00000533402 TMC6Q7Z403 805 aa9.04□□□□□ -0.96
CSRP1-218ENST00000533402 NLRP2Q9NX02 1062 aa9.04□□□□□ -0.96
CSRP1-218ENST00000533402 LUC7L2Q9Y383 392 aaKnown RBP9.04□□□□□ -0.96
CSRP1-218ENST00000533402 SCAF11Q99590 1463 aaKnown RBP9.04□□□□□ -0.96
CSRP1-218ENST00000533402 CASTP20810 708 aaKnown RBP9.04□□□□□ -0.96
CSRP1-218ENST00000533402 PPP2R5AQ15172 486 aa9.04□□□□□ -0.96
CSRP1-218ENST00000533402 PCK1P35558 622 aa9.04□□□□□ -0.96
CSRP1-218ENST00000533402 TBC1D2BQ9UPU7 963 aa9.04□□□□□ -0.96
CSRP1-218ENST00000533402 SKILP12757 684 aa9.04□□□□□ -0.96
CSRP1-218ENST00000533402 HCLS1P14317 486 aaPredicted RBP9.04□□□□□ -0.96
CSRP1-218ENST00000533402 ATP2B1P20020 1258 aa9.04□□□□□ -0.96
CSRP1-218ENST00000533402 DNAI1Q9UI46 699 aa9.04□□□□□ -0.96
CSRP1-218ENST00000533402 UHRF1BP1Q6BDS2 1440 aa9.04□□□□□ -0.96
CSRP1-218ENST00000533402 PEX19P40855 299 aa9.04□□□□□ -0.96
CSRP1-218ENST00000533402 EIF5P55010 431 aaKnown RBP9.04□□□□□ -0.96
CSRP1-218ENST00000533402 CKAP2LQ8IYA6 745 aa9.04□□□□□ -0.96
CSRP1-218ENST00000533402 ZEB2O60315 1214 aa9.04□□□□□ -0.96
CSRP1-218ENST00000533402 GOLGA1Q92805 767 aa9.04□□□□□ -0.96
CSRP1-218ENST00000533402 MPHOSPH6Q99547 160 aaKnown RBP9.04□□□□□ -0.96
CSRP1-218ENST00000533402 EFCC1Q9HA90 598 aa9.04□□□□□ -0.96
CSRP1-218ENST00000533402 TUBB4AP04350 444 aa9.03□□□□□ -0.96
CSRP1-218ENST00000533402 SH2D4BQ5SQS7 431 aa9.03□□□□□ -0.96
CSRP1-218ENST00000533402 RUNDC1Q96C34 613 aa9.03□□□□□ -0.96
CSRP1-218ENST00000533402 ZSCAN26Q16670 478 aa9.03□□□□□ -0.96
CSRP1-218ENST00000533402 CEP128Q6ZU80 1094 aa9.03□□□□□ -0.96
CSRP1-218ENST00000533402 FAM76AQ8TAV0 307 aa9.03□□□□□ -0.96
CSRP1-218ENST00000533402 FAM114A2Q9NRY5 505 aa9.03□□□□□ -0.96
CSRP1-218ENST00000533402 RALGAPBQ86X10 1494 aa9.03□□□□□ -0.96
CSRP1-218ENST00000533402 RLBP1P12271 317 aa9.03□□□□□ -0.96
CSRP1-218ENST00000533402 SCAND2PQ9GZW5 306 aaPredicted RBP9.03□□□□□ -0.96
CSRP1-218ENST00000533402 CTAGE5O15320 804 aa9.03□□□□□ -0.96
CSRP1-218ENST00000533402 CAVIN2O95810 425 aa9.03□□□□□ -0.96
CSRP1-218ENST00000533402 ZNF853P0CG23 659 aa9.03□□□□□ -0.96
CSRP1-218ENST00000533402 LACTBP83111 547 aaPredicted RBP9.03□□□□□ -0.96
CSRP1-218ENST00000533402 STK3Q13188 491 aa9.03□□□□□ -0.96
CSRP1-218ENST00000533402 HDXQ7Z353 690 aa9.03□□□□□ -0.96
CSRP1-218ENST00000533402 MICAL1Q8TDZ2 1067 aa9.03□□□□□ -0.96
CSRP1-218ENST00000533402 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.03□□□□□ -0.96
CSRP1-218ENST00000533402 MKRN1Q9UHC7 482 aaKnown RBP9.02□□□□□ -0.96
CSRP1-218ENST00000533402 DIAPH1O60610 1272 aaKnown RBP9.02□□□□□ -0.97
CSRP1-218ENST00000533402 ZNF165P49910 485 aa9.02□□□□□ -0.97
CSRP1-218ENST00000533402 G3BP1Q13283 466 aaKnown RBP eCLIP9.02□□□□□ -0.97
CSRP1-218ENST00000533402 RPUSD2Q8IZ73 545 aaKnown RBP9.02□□□□□ -0.97
CSRP1-218ENST00000533402 TANGO6Q9C0B7 1094 aa9.02□□□□□ -0.97
CSRP1-218ENST00000533402 ZCCHC11Q5TAX3 1644 aaKnown RBP9.02□□□□□ -0.97
CSRP1-218ENST00000533402 TUBB4BP68371 445 aa9.02□□□□□ -0.97
CSRP1-218ENST00000533402 CCDC178Q5BJE1 867 aa9.02□□□□□ -0.97
CSRP1-218ENST00000533402 PPP1R12CQ9BZL4 782 aa9.02□□□□□ -0.97
CSRP1-218ENST00000533402 PLXNC1O60486 1568 aa9.02□□□□□ -0.97
CSRP1-218ENST00000533402 CTAGE15A4D2H0 777 aa9.02□□□□□ -0.97
CSRP1-218ENST00000533402 CTAGE8P0CG41 777 aa9.02□□□□□ -0.97
CSRP1-218ENST00000533402 CCDC186Q7Z3E2 898 aa9.02□□□□□ -0.97
CSRP1-218ENST00000533402 CTAGE6Q86UF2 777 aa9.02□□□□□ -0.97
CSRP1-218ENST00000533402 TXNDC2Q86VQ3 553 aa9.02□□□□□ -0.97
CSRP1-218ENST00000533402 CHD1LQ86WJ1 897 aa9.02□□□□□ -0.97
CSRP1-218ENST00000533402 CTAGE4Q8IX94 777 aa9.02□□□□□ -0.97
CSRP1-218ENST00000533402 ATP10AO60312 1499 aa9.02□□□□□ -0.97
CSRP1-218ENST00000533402 ZMAT2Q96NC0 199 aaKnown RBP9.02□□□□□ -0.97
CSRP1-218ENST00000533402 FYB1O15117 783 aa9.01□□□□□ -0.97
CSRP1-218ENST00000533402 ZNF652Q9Y2D9 606 aa9.01□□□□□ -0.97
CSRP1-218ENST00000533402 POLR1AO95602 1720 aaPredicted RBP9.01□□□□□ -0.97
CSRP1-218ENST00000533402 ZSCAN31Q96LW9 406 aaPredicted RBP9.01□□□□□ -0.97
CSRP1-218ENST00000533402 ATP11AP98196 1134 aa9.01□□□□□ -0.97
CSRP1-218ENST00000533402 SERPINA10Q9UK55 444 aa9.01□□□□□ -0.97
CSRP1-218ENST00000533402 GNAI1P63096 354 aa9.01□□□□□ -0.97
CSRP1-218ENST00000533402 PIP4K2BP78356 416 aa9.01□□□□□ -0.97
CSRP1-218ENST00000533402 HECW2Q9P2P5 1572 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms