RNA–Protein interactions for RNA: ENST00000533308.1

COMMD9-207, Transcript of COMM domain containing 9, humanhuman

TSL 3

Gene COMMD9, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-207ENST00000533308 ZNF428Q96B54 188 aa10.14□□□□□ -0.79
COMMD9-207ENST00000533308 ARXQ96QS3 562 aa10.14□□□□□ -0.79
COMMD9-207ENST00000533308 TNNQ9UQP3 1299 aa10.14□□□□□ -0.79
COMMD9-207ENST00000533308 GYS1P13807 737 aa10.13□□□□□ -0.79
COMMD9-207ENST00000533308 RFC4P35249 363 aa10.13□□□□□ -0.79
COMMD9-207ENST00000533308 STK31Q9BXU1 1019 aa10.13□□□□□ -0.79
COMMD9-207ENST00000533308 SMC4Q9NTJ3 1288 aa10.13□□□□□ -0.79
COMMD9-207ENST00000533308 NARFQ9UHQ1 456 aa10.13□□□□□ -0.79
COMMD9-207ENST00000533308 NRXN2Q9P2S2 1712 aa10.13□□□□□ -0.79
COMMD9-207ENST00000533308 TNRC6CQ9HCJ0 1690 aaKnown RBP10.12□□□□□ -0.79
COMMD9-207ENST00000533308 MAP3K15Q6ZN16 1313 aa10.12□□□□□ -0.79
COMMD9-207ENST00000533308 FLIIQ13045 1269 aa10.12□□□□□ -0.79
COMMD9-207ENST00000533308 KIF6Q6ZMV9 814 aa10.12□□□□□ -0.79
COMMD9-207ENST00000533308 HYPKQ9NX55 129 aa10.12□□□□□ -0.79
COMMD9-207ENST00000533308 ATF5Q9Y2D1 282 aaPredicted RBP10.12□□□□□ -0.79
COMMD9-207ENST00000533308 UBN2Q6ZU65 1347 aa10.11□□□□□ -0.79
COMMD9-207ENST00000533308 ANKRD31Q8N7Z5 1873 aa10.11□□□□□ -0.79
COMMD9-207ENST00000533308 A0A087WZG4 1122 aa10.11□□□□□ -0.79
COMMD9-207ENST00000533308 F6X3S4 739 aa10.11□□□□□ -0.79
COMMD9-207ENST00000533308 CT47B1P0C2W7 299 aaPredicted RBP10.11□□□□□ -0.79
COMMD9-207ENST00000533308 DDR1Q08345 913 aa10.11□□□□□ -0.79
COMMD9-207ENST00000533308 ALDH1L2Q3SY69 923 aa10.11□□□□□ -0.79
COMMD9-207ENST00000533308 TBC1D9BQ66K14 1250 aa10.11□□□□□ -0.79
COMMD9-207ENST00000533308 BICDL1Q6ZP65 573 aa10.11□□□□□ -0.79
COMMD9-207ENST00000533308 FLAD1Q8NFF5 587 aa10.11□□□□□ -0.79
COMMD9-207ENST00000533308 LRP5O75197 1615 aa10.11□□□□□ -0.79
COMMD9-207ENST00000533308 DDX60Q8IY21 1712 aaKnown RBP10.1□□□□□ -0.79
COMMD9-207ENST00000533308 KIAA1551Q9HCM1 1747 aa10.1□□□□□ -0.79
COMMD9-207ENST00000533308 ATP10DQ9P241 1426 aa10.1□□□□□ -0.79
COMMD9-207ENST00000533308 ZPR1O75312 459 aa10.1□□□□□ -0.79
COMMD9-207ENST00000533308 GPTP24298 496 aa10.1□□□□□ -0.79
COMMD9-207ENST00000533308 FKBP5Q13451 457 aaPredicted RBP10.1□□□□□ -0.79
COMMD9-207ENST00000533308 NFIXQ14938 502 aa10.1□□□□□ -0.79
COMMD9-207ENST00000533308 MAP3K2Q9Y2U5 619 aa10.1□□□□□ -0.79
COMMD9-207ENST00000533308 LAMB2P55268 1798 aa10.1□□□□□ -0.79
COMMD9-207ENST00000533308 CARMIL3Q8ND23 1372 aa10.1□□□□□ -0.79
COMMD9-207ENST00000533308 COL11A2P13942 1736 aaPredicted RBP10.1□□□□□ -0.79
COMMD9-207ENST00000533308 PI4KAP2A4QPH2 592 aa10.09□□□□□ -0.79
COMMD9-207ENST00000533308 ATP5J2-PTCD1G3V325 749 aa10.09□□□□□ -0.79
COMMD9-207ENST00000533308 MMP10P09238 476 aa10.09□□□□□ -0.79
COMMD9-207ENST00000533308 PTGER2P43116 358 aa10.09□□□□□ -0.79
COMMD9-207ENST00000533308 ANKRD13DQ6ZTN6 518 aa10.09□□□□□ -0.79
COMMD9-207ENST00000533308 NPM2Q86SE8 214 aaKnown RBP10.09□□□□□ -0.79
COMMD9-207ENST00000533308 PI4KAP1Q8N8J0 262 aa10.09□□□□□ -0.79
COMMD9-207ENST00000533308 PLBD2Q8NHP8 589 aa10.09□□□□□ -0.79
COMMD9-207ENST00000533308 SGIP1Q9BQI5 828 aa10.09□□□□□ -0.79
COMMD9-207ENST00000533308 MTFR1LQ9H019 292 aa10.09□□□□□ -0.79
COMMD9-207ENST00000533308 RCAN3Q9UKA8 241 aa10.09□□□□□ -0.79
COMMD9-207ENST00000533308 NOB1Q9ULX3 412 aaKnown RBP10.09□□□□□ -0.79
COMMD9-207ENST00000533308 KIF13BQ9NQT8 1826 aa10.08□□□□□ -0.8
COMMD9-207ENST00000533308 FAM177BA6PVY3 158 aa10.08□□□□□ -0.8
COMMD9-207ENST00000533308 HMGB2P26583 209 aaKnown RBP10.08□□□□□ -0.8
COMMD9-207ENST00000533308 GIGYF2Q6Y7W6 1299 aaKnown RBP10.08□□□□□ -0.8
COMMD9-207ENST00000533308 RIC3Q7Z5B4 369 aa10.08□□□□□ -0.8
COMMD9-207ENST00000533308 CCDC24Q8N4L8 307 aa10.08□□□□□ -0.8
COMMD9-207ENST00000533308 FRAT1Q92837 279 aaPredicted RBP10.08□□□□□ -0.8
COMMD9-207ENST00000533308 MYD88Q99836 296 aa10.08□□□□□ -0.8
COMMD9-207ENST00000533308 PXDNLA1KZ92 1463 aa10.08□□□□□ -0.8
COMMD9-207ENST00000533308 KIF16BQ96L93 1317 aa10.07□□□□□ -0.8
COMMD9-207ENST00000533308 CACNA1SQ13698 1873 aa10.07□□□□□ -0.8
COMMD9-207ENST00000533308 ABCC12Q96J65 1359 aa10.07□□□□□ -0.8
COMMD9-207ENST00000533308 ERVV-1B6SEH8 477 aa10.07□□□□□ -0.8
COMMD9-207ENST00000533308 POLRMTO00411 1230 aaKnown RBP10.07□□□□□ -0.8
COMMD9-207ENST00000533308 PLIN1O60240 522 aa10.07□□□□□ -0.8
COMMD9-207ENST00000533308 IGKV5-2P06315 115 aa10.07□□□□□ -0.8
COMMD9-207ENST00000533308 TM4SF1P30408 202 aa10.07□□□□□ -0.8
COMMD9-207ENST00000533308 BRPF1P55201 1214 aaPredicted RBP10.07□□□□□ -0.8
COMMD9-207ENST00000533308 CWF19L2Q2TBE0 894 aaKnown RBP10.07□□□□□ -0.8
COMMD9-207ENST00000533308 KSR2Q6VAB6 950 aa10.07□□□□□ -0.8
COMMD9-207ENST00000533308 SLC16A10Q8TF71 515 aa10.07□□□□□ -0.8
COMMD9-207ENST00000533308 NIP7Q9Y221 180 aaKnown RBP eCLIP10.07□□□□□ -0.8
COMMD9-207ENST00000533308 PTPRCP08575 1304 aa10.07□□□□□ -0.8
COMMD9-207ENST00000533308 COL4A1P02462 1669 aa10.06□□□□□ -0.8
COMMD9-207ENST00000533308 DDX58O95786 925 aaKnown RBP10.06□□□□□ -0.8
COMMD9-207ENST00000533308 TRIM27P14373 513 aa10.06□□□□□ -0.8
COMMD9-207ENST00000533308 TCIRG1Q13488 830 aa10.06□□□□□ -0.8
COMMD9-207ENST00000533308 SUSD4Q5VX71 490 aa10.06□□□□□ -0.8
COMMD9-207ENST00000533308 ZNF34Q8IZ26 560 aa10.06□□□□□ -0.8
COMMD9-207ENST00000533308 SYNE4Q8N205 404 aa10.06□□□□□ -0.8
COMMD9-207ENST00000533308 DNAAF4Q8WXU2 420 aa10.06□□□□□ -0.8
COMMD9-207ENST00000533308 JARID2Q92833 1246 aaPredicted RBP10.06□□□□□ -0.8
COMMD9-207ENST00000533308 CLUAP1Q96AJ1 413 aa10.06□□□□□ -0.8
COMMD9-207ENST00000533308 ISCA1Q9BUE6 129 aa10.06□□□□□ -0.8
COMMD9-207ENST00000533308 METTL22Q9BUU2 404 aaPredicted RBP10.06□□□□□ -0.8
COMMD9-207ENST00000533308 ZNF652Q9Y2D9 606 aa10.06□□□□□ -0.8
COMMD9-207ENST00000533308 C10orf71Q711Q0 1435 aa10.06□□□□□ -0.8
COMMD9-207ENST00000533308 DLEC1Q9Y238 1755 aa10.06□□□□□ -0.8
COMMD9-207ENST00000533308 ABCC4O15439 1325 aa10.06□□□□□ -0.8
COMMD9-207ENST00000533308 NTSR2O95665 410 aa10.05□□□□□ -0.8
COMMD9-207ENST00000533308 SERPINB2P05120 415 aa10.05□□□□□ -0.8
COMMD9-207ENST00000533308 RLBP1P12271 317 aa10.05□□□□□ -0.8
COMMD9-207ENST00000533308 BEND3Q5T5X7 828 aa10.05□□□□□ -0.8
COMMD9-207ENST00000533308 SLC4A10Q6U841 1118 aa10.05□□□□□ -0.8
COMMD9-207ENST00000533308 CLEC4GQ6UXB4 293 aa10.05□□□□□ -0.8
COMMD9-207ENST00000533308 NLRP10Q86W26 655 aa10.05□□□□□ -0.8
COMMD9-207ENST00000533308 NUTM1Q86Y26 1132 aa10.05□□□□□ -0.8
COMMD9-207ENST00000533308 NLGN1Q8N2Q7 840 aa10.05□□□□□ -0.8
COMMD9-207ENST00000533308 CHMP4AQ9BY43 222 aa10.05□□□□□ -0.8
COMMD9-207ENST00000533308 MYH3P11055 1940 aa10.05□□□□□ -0.8
COMMD9-207ENST00000533308 BRCA1P38398 1863 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms