RNA–Protein interactions for RNA: ENST00000533299.2

LMO7-223, Transcript of LIM domain 7, human

TSL 3

Gene LMO7, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-223	ENST00000533299	RNF114	Q9Y508	228 aa		6.31	□□□□□ -1.4
LMO7-223	ENST00000533299	MEN1	O00255	615 aa		6.3	□□□□□ -1.4
LMO7-223	ENST00000533299	FGFR3	P22607	806 aa		6.3	□□□□□ -1.4
LMO7-223	ENST00000533299	CDCA8	Q53HL2	280 aa		6.3	□□□□□ -1.4
LMO7-223	ENST00000533299	ESCO1	Q5FWF5	840 aa		6.3	□□□□□ -1.4
LMO7-223	ENST00000533299	TAS1R3	Q7RTX0	852 aa		6.3	□□□□□ -1.4
LMO7-223	ENST00000533299	HOMEZ	Q8IX15	550 aa		6.3	□□□□□ -1.4
LMO7-223	ENST00000533299	GNRH1	P01148	92 aa		6.29	□□□□□ -1.4
LMO7-223	ENST00000533299	ELOA	Q14241	798 aa	Known RBP	6.29	□□□□□ -1.4
LMO7-223	ENST00000533299	NEURL1B	A8MQ27	555 aa		6.29	□□□□□ -1.4
LMO7-223	ENST00000533299	USP17L15	C9J2P7	530 aa		6.29	□□□□□ -1.4
LMO7-223	ENST00000533299	USP17L10	C9JJH3	530 aa		6.29	□□□□□ -1.4
LMO7-223	ENST00000533299	USP17L13	C9JLJ4	530 aa		6.29	□□□□□ -1.4
LMO7-223	ENST00000533299	USP17L12	C9JPN9	530 aa		6.29	□□□□□ -1.4
LMO7-223	ENST00000533299	USP17L11	C9JVI0	530 aa		6.29	□□□□□ -1.4
LMO7-223	ENST00000533299	USP17L21	D6R901	530 aa		6.29	□□□□□ -1.4
LMO7-223	ENST00000533299	USP17L18	D6R9N7	530 aa		6.29	□□□□□ -1.4
LMO7-223	ENST00000533299	USP17L22	D6RA61	530 aa		6.29	□□□□□ -1.4
LMO7-223	ENST00000533299	USP17L17	D6RBQ6	530 aa		6.29	□□□□□ -1.4
LMO7-223	ENST00000533299	USP17L19	D6RCP7	530 aa		6.29	□□□□□ -1.4
LMO7-223	ENST00000533299	USP17L20	D6RJB6	530 aa		6.29	□□□□□ -1.4
LMO7-223	ENST00000533299	WASL	O00401	505 aa	Predicted RBP	6.29	□□□□□ -1.4
LMO7-223	ENST00000533299	SCTR	P47872	440 aa		6.29	□□□□□ -1.4
LMO7-223	ENST00000533299	SRPK2	P78362	688 aa	Known RBP	6.29	□□□□□ -1.4
LMO7-223	ENST00000533299	USP17L24	Q0WX57	530 aa		6.29	□□□□□ -1.4
LMO7-223	ENST00000533299	CTBS	Q01459	385 aa		6.28	□□□□□ -1.4
LMO7-223	ENST00000533299	FAM200A	Q8TCP9	573 aa		6.28	□□□□□ -1.4
LMO7-223	ENST00000533299	NLRP3	Q96P20	1036 aa		6.28	□□□□□ -1.4
LMO7-223	ENST00000533299	OSBPL3	Q9H4L5	887 aa		6.28	□□□□□ -1.4
LMO7-223	ENST00000533299	AVEN	Q9NQS1	362 aa	Predicted RBP	6.28	□□□□□ -1.4
LMO7-223	ENST00000533299	NDFIP2	Q9NV92	336 aa		6.28	□□□□□ -1.4
LMO7-223	ENST00000533299	BACH1	O14867	736 aa		6.27	□□□□□ -1.41
LMO7-223	ENST00000533299	JAG1	P78504	1218 aa		6.27	□□□□□ -1.41
LMO7-223	ENST00000533299	PTK7	Q13308	1070 aa		6.27	□□□□□ -1.41
LMO7-223	ENST00000533299	CCDC102B	Q68D86	513 aa		6.27	□□□□□ -1.41
LMO7-223	ENST00000533299	ANKMY2	Q8IV38	441 aa		6.27	□□□□□ -1.41
LMO7-223	ENST00000533299	SIX5	Q8N196	739 aa		6.27	□□□□□ -1.41
LMO7-223	ENST00000533299	ZNF594	Q96JF6	807 aa	Predicted RBP	6.27	□□□□□ -1.41
LMO7-223	ENST00000533299	NOVA2	Q9UNW9	492 aa	Known RBP	6.27	□□□□□ -1.41
LMO7-223	ENST00000533299	PCDHGA11	Q9Y5H2	935 aa		6.27	□□□□□ -1.41
LMO7-223	ENST00000533299		A0A1W2PRU2	124 aa		6.27	□□□□□ -1.41
LMO7-223	ENST00000533299	SEC13	P55735	322 aa		6.27	□□□□□ -1.41
LMO7-223	ENST00000533299	CLDN10	P78369	228 aa		6.27	□□□□□ -1.41
LMO7-223	ENST00000533299	CRTC2	Q53ET0	693 aa	Predicted RBP	6.27	□□□□□ -1.41
LMO7-223	ENST00000533299	TPCN2	Q8NHX9	752 aa		6.27	□□□□□ -1.41
LMO7-223	ENST00000533299	ADH6	P28332	368 aa		6.26	□□□□□ -1.41
LMO7-223	ENST00000533299	UST	Q9Y2C2	406 aa		6.26	□□□□□ -1.41
LMO7-223	ENST00000533299		A0A1B0GTH6	734 aa		6.25	□□□□□ -1.41
LMO7-223	ENST00000533299	ZBTB7B	O15156	539 aa	Predicted RBP	6.25	□□□□□ -1.41
LMO7-223	ENST00000533299	DPYD	Q12882	1025 aa		6.25	□□□□□ -1.41
LMO7-223	ENST00000533299	KRTAP9-8	Q9BYQ0	159 aa		6.25	□□□□□ -1.41
LMO7-223	ENST00000533299		M0R2N6	131 aa		6.25	□□□□□ -1.41
LMO7-223	ENST00000533299	TAL1	P17542	331 aa	Predicted RBP	6.25	□□□□□ -1.41
LMO7-223	ENST00000533299	GTF2E1	P29083	439 aa	Predicted RBP	6.25	□□□□□ -1.41
LMO7-223	ENST00000533299	GDF10	P55107	478 aa		6.25	□□□□□ -1.41
LMO7-223	ENST00000533299	C9orf172	C9J069	976 aa		6.24	□□□□□ -1.41
LMO7-223	ENST00000533299	INHA	P05111	366 aa		6.24	□□□□□ -1.41
LMO7-223	ENST00000533299	EFHC2	Q5JST6	749 aa		6.24	□□□□□ -1.41
LMO7-223	ENST00000533299	PGBD3	Q8N328	593 aa		6.24	□□□□□ -1.41
LMO7-223	ENST00000533299	ABHD17A	Q96GS6	310 aa		6.24	□□□□□ -1.41
LMO7-223	ENST00000533299	ARHGEF10L	Q9HCE6	1279 aa		6.24	□□□□□ -1.41
LMO7-223	ENST00000533299	PDIA4	P13667	645 aa	Known RBP	6.23	□□□□□ -1.41
LMO7-223	ENST00000533299	SWI5	Q1ZZU3	235 aa		6.23	□□□□□ -1.41
LMO7-223	ENST00000533299	ESYT1	Q9BSJ8	1104 aa		6.23	□□□□□ -1.41
LMO7-223	ENST00000533299	BNIP3L	O60238	219 aa		6.22	□□□□□ -1.41
LMO7-223	ENST00000533299	CLN3	Q13286	438 aa		6.22	□□□□□ -1.41
LMO7-223	ENST00000533299	ADGRE1	Q14246	886 aa		6.22	□□□□□ -1.41
LMO7-223	ENST00000533299	B4GALNT3	Q6L9W6	998 aa		6.22	□□□□□ -1.41
LMO7-223	ENST00000533299	RETREG2	Q8NC44	543 aa		6.22	□□□□□ -1.41
LMO7-223	ENST00000533299	CNKSR1	Q969H4	720 aa		6.22	□□□□□ -1.41
LMO7-223	ENST00000533299	HINFP	Q9BQA5	517 aa		6.22	□□□□□ -1.41
LMO7-223	ENST00000533299	GPAM	Q9HCL2	828 aa		6.22	□□□□□ -1.41
LMO7-223	ENST00000533299	PCMTD2	Q9NV79	361 aa		6.22	□□□□□ -1.41
LMO7-223	ENST00000533299	KIAA1024	Q9UPX6	916 aa		6.22	□□□□□ -1.41
LMO7-223	ENST00000533299	TRIM28	Q13263	835 aa	Known RBP	6.22	□□□□□ -1.41
LMO7-223	ENST00000533299	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	6.22	□□□□□ -1.41
LMO7-223	ENST00000533299	XAGE2	Q96GT9	111 aa		6.22	□□□□□ -1.41
LMO7-223	ENST00000533299	ETNK1	Q9HBU6	452 aa		6.22	□□□□□ -1.41
LMO7-223	ENST00000533299	ZNF358	Q9NW07	568 aa		6.22	□□□□□ -1.41
LMO7-223	ENST00000533299	SFI1	A8K8P3	1242 aa		6.21	□□□□□ -1.42
LMO7-223	ENST00000533299	TMEM229A	B2RXF0	380 aa		6.21	□□□□□ -1.42
LMO7-223	ENST00000533299	SCNN1D	P51172	638 aa		6.21	□□□□□ -1.42
LMO7-223	ENST00000533299	FCHSD1	Q86WN1	690 aa		6.21	□□□□□ -1.42
LMO7-223	ENST00000533299	RAB6B	Q9NRW1	208 aa		6.21	□□□□□ -1.42
LMO7-223	ENST00000533299	SERTAD1	Q9UHV2	236 aa		6.21	□□□□□ -1.42
LMO7-223	ENST00000533299	ZMIZ1	Q9ULJ6	1067 aa		6.21	□□□□□ -1.42
LMO7-223	ENST00000533299	CHMP3	Q9Y3E7	222 aa		6.21	□□□□□ -1.42
LMO7-223	ENST00000533299	TLR1	Q15399	786 aa		6.2	□□□□□ -1.42
LMO7-223	ENST00000533299	FAM182B	Q5T319	152 aa		6.2	□□□□□ -1.42
LMO7-223	ENST00000533299	TMEM164	Q5U3C3	297 aa		6.2	□□□□□ -1.42
LMO7-223	ENST00000533299	SLC4A9	Q96Q91	983 aa		6.2	□□□□□ -1.42
LMO7-223	ENST00000533299	SMTN	P53814	917 aa		6.2	□□□□□ -1.42
LMO7-223	ENST00000533299	TXNRD3	Q86VQ6	643 aa		6.2	□□□□□ -1.42
LMO7-223	ENST00000533299	GAS2L2	Q8NHY3	880 aa		6.2	□□□□□ -1.42
LMO7-223	ENST00000533299	STK32A	Q8WU08	396 aa		6.2	□□□□□ -1.42
LMO7-223	ENST00000533299	KLF15	Q9UIH9	416 aa		6.2	□□□□□ -1.42
LMO7-223	ENST00000533299		A6NJY4	79 aa		6.19	□□□□□ -1.42
LMO7-223	ENST00000533299	DKK1	O94907	266 aa		6.19	□□□□□ -1.42
LMO7-223	ENST00000533299	IL2RA	P01589	272 aa		6.19	□□□□□ -1.42
LMO7-223	ENST00000533299	CENPC	Q03188	943 aa		6.19	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms