RNA–Protein interactions for RNA: ENST00000532881.5

SSH3-210, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 1 (best)

Gene SSH3, Length 2,587 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-210ENST00000532881 ANP32BQ92688 251 aaKnown RBP18■□□□□ 0.47
SSH3-210ENST00000532881 FAM227BQ96M60 508 aa18■□□□□ 0.47
SSH3-210ENST00000532881 BICC1Q9H694 974 aaKnown RBP18■□□□□ 0.47
SSH3-210ENST00000532881 CHGBP05060 677 aa18■□□□□ 0.47
SSH3-210ENST00000532881 MCM2P49736 904 aa18■□□□□ 0.47
SSH3-210ENST00000532881 EDC3Q96F86 508 aaKnown RBP18■□□□□ 0.47
SSH3-210ENST00000532881 CACNA1FO60840 1977 aa18■□□□□ 0.47
SSH3-210ENST00000532881 TCHHQ07283 1943 aa17.99■□□□□ 0.47
SSH3-210ENST00000532881 CLASRPQ8N2M8 674 aaKnown RBP17.99■□□□□ 0.47
SSH3-210ENST00000532881 KCNH5Q8NCM2 988 aa17.99■□□□□ 0.47
SSH3-210ENST00000532881 RPAP1Q9BWH6 1393 aaPredicted RBP17.99■□□□□ 0.47
SSH3-210ENST00000532881 SASH1O94885 1247 aa17.99■□□□□ 0.47
SSH3-210ENST00000532881 LRSAM1Q6UWE0 723 aa17.99■□□□□ 0.47
SSH3-210ENST00000532881 KIAA1211Q6ZU35 1233 aa17.99■□□□□ 0.47
SSH3-210ENST00000532881 EAF2Q96CJ1 260 aaPredicted RBP17.99■□□□□ 0.47
SSH3-210ENST00000532881 TTC14Q96N46 770 aa17.99■□□□□ 0.47
SSH3-210ENST00000532881 DIAPH3Q9NSV4 1193 aa17.99■□□□□ 0.47
SSH3-210ENST00000532881 TAF6LQ9Y6J9 622 aa17.99■□□□□ 0.47
SSH3-210ENST00000532881 IFIT2P09913 472 aaKnown RBP17.98■□□□□ 0.47
SSH3-210ENST00000532881 KSR2Q6VAB6 950 aa17.98■□□□□ 0.47
SSH3-210ENST00000532881 CCDC83Q8IWF9 413 aa17.98■□□□□ 0.47
SSH3-210ENST00000532881 AOX1Q06278 1338 aa17.98■□□□□ 0.47
SSH3-210ENST00000532881 NECAB1Q8N987 351 aa17.98■□□□□ 0.47
SSH3-210ENST00000532881 CABLES1Q8TDN4 633 aa17.98■□□□□ 0.47
SSH3-210ENST00000532881 INTS4Q96HW7 963 aaKnown RBP17.98■□□□□ 0.47
SSH3-210ENST00000532881 CCDC9Q9Y3X0 531 aaKnown RBP17.98■□□□□ 0.47
SSH3-210ENST00000532881 JAKMIP1Q96N16 626 aaKnown RBP17.97■□□□□ 0.47
SSH3-210ENST00000532881 BOLA2Q9H3K6 86 aa17.97■□□□□ 0.47
SSH3-210ENST00000532881 EPHA10Q5JZY3 1008 aa17.97■□□□□ 0.47
SSH3-210ENST00000532881 NFATC2IPQ8NCF5 419 aa17.97■□□□□ 0.47
SSH3-210ENST00000532881 IGKV5-2P06315 115 aa17.96■□□□□ 0.47
SSH3-210ENST00000532881 PDIA6Q15084 440 aa17.96■□□□□ 0.47
SSH3-210ENST00000532881 ECHDC1Q9NTX5 307 aa17.96■□□□□ 0.47
SSH3-210ENST00000532881 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.96■□□□□ 0.47
SSH3-210ENST00000532881 MED1Q15648 1581 aaPredicted RBP17.96■□□□□ 0.47
SSH3-210ENST00000532881 GLRX3O76003 335 aaKnown RBP17.96■□□□□ 0.47
SSH3-210ENST00000532881 SYT1P21579 422 aa17.96■□□□□ 0.47
SSH3-210ENST00000532881 KDM3BQ7LBC6 1761 aa17.96■□□□□ 0.47
SSH3-210ENST00000532881 NLRP2Q9NX02 1062 aa17.95■□□□□ 0.46
SSH3-210ENST00000532881 FIBPO43427 364 aa17.95■□□□□ 0.46
SSH3-210ENST00000532881 HOXB7P09629 217 aa17.95■□□□□ 0.46
SSH3-210ENST00000532881 KRT28Q7Z3Y7 464 aa17.95■□□□□ 0.46
SSH3-210ENST00000532881 ZSCAN30Q86W11 494 aa17.95■□□□□ 0.46
SSH3-210ENST00000532881 GRM8O00222 908 aa17.94■□□□□ 0.46
SSH3-210ENST00000532881 AMOTQ4VCS5 1084 aa17.94■□□□□ 0.46
SSH3-210ENST00000532881 RIC3Q7Z5B4 369 aa17.94■□□□□ 0.46
SSH3-210ENST00000532881 ST3GAL1Q11201 340 aa17.94■□□□□ 0.46
SSH3-210ENST00000532881 HYPKQ9NX55 129 aa17.94■□□□□ 0.46
SSH3-210ENST00000532881 CHD2O14647 1828 aaKnown RBP17.94■□□□□ 0.46
SSH3-210ENST00000532881 NMIQ13287 307 aaPredicted RBP17.93■□□□□ 0.46
SSH3-210ENST00000532881 CHRNA2Q15822 529 aa17.93■□□□□ 0.46
SSH3-210ENST00000532881 LIMCH1Q9UPQ0 1083 aa17.93■□□□□ 0.46
SSH3-210ENST00000532881 FAM173BQ6P4H8 233 aa17.93■□□□□ 0.46
SSH3-210ENST00000532881 COPS6Q7L5N1 327 aa17.93■□□□□ 0.46
SSH3-210ENST00000532881 N4BP2Q86UW6 1770 aaPredicted RBP17.93■□□□□ 0.46
SSH3-210ENST00000532881 XAGE3Q8WTP9 111 aa17.93■□□□□ 0.46
SSH3-210ENST00000532881 MYD88Q99836 296 aa17.93■□□□□ 0.46
SSH3-210ENST00000532881 USP16Q9Y5T5 823 aa17.93■□□□□ 0.46
SSH3-210ENST00000532881 WDR33Q9C0J8 1336 aaKnown RBP17.92■□□□□ 0.46
SSH3-210ENST00000532881 A0A0D9SFI3 127 aa17.92■□□□□ 0.46
SSH3-210ENST00000532881 MSNP26038 577 aaKnown RBP17.92■□□□□ 0.46
SSH3-210ENST00000532881 ADGRL3Q9HAR2 1447 aa17.92■□□□□ 0.46
SSH3-210ENST00000532881 STX6O43752 255 aa17.92■□□□□ 0.46
SSH3-210ENST00000532881 GJB2P29033 226 aa17.92■□□□□ 0.46
SSH3-210ENST00000532881 KCNJ4P48050 445 aa17.92■□□□□ 0.46
SSH3-210ENST00000532881 MTX1Q13505 466 aa17.92■□□□□ 0.46
SSH3-210ENST00000532881 HSP90AB4PQ58FF6 505 aa17.92■□□□□ 0.46
SSH3-210ENST00000532881 PDRG1Q9NUG6 133 aa17.92■□□□□ 0.46
SSH3-210ENST00000532881 SMC3Q9UQE7 1217 aa17.92■□□□□ 0.46
SSH3-210ENST00000532881 TTC41PQ6P2S7 1318 aa17.91■□□□□ 0.46
SSH3-210ENST00000532881 ATP5J2-PTCD1G3V325 749 aa17.91■□□□□ 0.46
SSH3-210ENST00000532881 PTCD1O75127 700 aaKnown RBP17.91■□□□□ 0.46
SSH3-210ENST00000532881 ME3Q16798 604 aa17.91■□□□□ 0.46
SSH3-210ENST00000532881 IL17RAQ96F46 866 aa17.91■□□□□ 0.46
SSH3-210ENST00000532881 CHMP3Q9Y3E7 222 aa17.91■□□□□ 0.46
SSH3-210ENST00000532881 RBM8AQ9Y5S9 174 aaKnown RBP17.91■□□□□ 0.46
SSH3-210ENST00000532881 MBD3O95983 291 aa17.91■□□□□ 0.46
SSH3-210ENST00000532881 ZSCAN22P10073 491 aaPredicted RBP17.91■□□□□ 0.46
SSH3-210ENST00000532881 G3BP1Q13283 466 aaKnown RBP eCLIP17.91■□□□□ 0.46
SSH3-210ENST00000532881 ZNF790Q6PG37 636 aa17.91■□□□□ 0.46
SSH3-210ENST00000532881 LINS1Q8NG48 757 aa17.91■□□□□ 0.46
SSH3-210ENST00000532881 ZNF496Q96IT1 587 aaPredicted RBP17.91■□□□□ 0.46
SSH3-210ENST00000532881 PDLIM2Q96JY6 352 aa17.91■□□□□ 0.46
SSH3-210ENST00000532881 DNM1Q05193 864 aaKnown RBP17.9■□□□□ 0.46
SSH3-210ENST00000532881 ZNF589Q86UQ0 364 aaPredicted RBP17.9■□□□□ 0.46
SSH3-210ENST00000532881 FERMT3Q86UX7 667 aa17.9■□□□□ 0.46
SSH3-210ENST00000532881 PROSER2Q86WR7 435 aaPredicted RBP17.9■□□□□ 0.46
SSH3-210ENST00000532881 RGPD5Q99666 1765 aa17.9■□□□□ 0.46
SSH3-210ENST00000532881 VPS37CA5D8V6 355 aaPredicted RBP17.9■□□□□ 0.46
SSH3-210ENST00000532881 ALDH1L1O75891 902 aa17.9■□□□□ 0.46
SSH3-210ENST00000532881 SLFNL1Q499Z3 407 aa17.9■□□□□ 0.46
SSH3-210ENST00000532881 DDX21Q9NR30 783 aaKnown RBP eCLIP17.9■□□□□ 0.46
SSH3-210ENST00000532881 USP54Q70EL1 1684 aa17.9■□□□□ 0.46
SSH3-210ENST00000532881 ZNF830Q96NB3 372 aaPredicted RBP17.89■□□□□ 0.46
SSH3-210ENST00000532881 TSPY26PQ9H489 355 aa17.89■□□□□ 0.46
SSH3-210ENST00000532881 TPCN1Q9ULQ1 816 aa17.89■□□□□ 0.46
SSH3-210ENST00000532881 HEG1Q9ULI3 1381 aa17.89■□□□□ 0.45
SSH3-210ENST00000532881 LMO7Q8WWI1 1683 aa17.89■□□□□ 0.45
SSH3-210ENST00000532881 ERBB3P21860 1342 aa17.89■□□□□ 0.45
SSH3-210ENST00000532881 USP42Q9H9J4 1324 aaKnown RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms