RNA–Protein interactions for RNA: ENST00000532833.1

TRIM29-219, Transcript of tripartite motif containing 29, humanhuman

TSL 4

Gene TRIM29, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-219ENST00000532833 STYK1Q6J9G0 422 aa23.17■■□□□ 1.3
TRIM29-219ENST00000532833 BCORQ6W2J9 1755 aa23.17■■□□□ 1.3
TRIM29-219ENST00000532833 GAS2L2Q8NHY3 880 aa23.16■■□□□ 1.3
TRIM29-219ENST00000532833 FMNL2Q96PY5 1086 aa23.16■■□□□ 1.3
TRIM29-219ENST00000532833 U2SURPO15042 1029 aaKnown RBP23.15■■□□□ 1.3
TRIM29-219ENST00000532833 MASTLQ96GX5 879 aa23.15■■□□□ 1.3
TRIM29-219ENST00000532833 NPHP1O15259 732 aa23.14■■□□□ 1.29
TRIM29-219ENST00000532833 PIP4K2AP48426 406 aaPredicted RBP23.14■■□□□ 1.29
TRIM29-219ENST00000532833 ST5P78524 1137 aa23.14■■□□□ 1.29
TRIM29-219ENST00000532833 DZIP3Q86Y13 1208 aaKnown RBP23.14■■□□□ 1.29
TRIM29-219ENST00000532833 C7orf43Q8WVR3 580 aa23.14■■□□□ 1.29
TRIM29-219ENST00000532833 CEMIPQ8WUJ3 1361 aa23.14■■□□□ 1.29
TRIM29-219ENST00000532833 PASKQ96RG2 1323 aa23.13■■□□□ 1.29
TRIM29-219ENST00000532833 USP16Q9Y5T5 823 aa23.13■■□□□ 1.29
TRIM29-219ENST00000532833 FOXN1O15353 648 aa23.12■■□□□ 1.29
TRIM29-219ENST00000532833 SCN4AP35499 1836 aa23.12■■□□□ 1.29
TRIM29-219ENST00000532833 CNTNAP1P78357 1384 aa23.12■■□□□ 1.29
TRIM29-219ENST00000532833 PRAMEF22A3QJZ6 481 aa23.11■■□□□ 1.29
TRIM29-219ENST00000532833 SOGA3Q5TF21 947 aa23.11■■□□□ 1.29
TRIM29-219ENST00000532833 NPM2Q86SE8 214 aaKnown RBP23.11■■□□□ 1.29
TRIM29-219ENST00000532833 L3MBTL3Q96JM7 780 aaPredicted RBP23.11■■□□□ 1.29
TRIM29-219ENST00000532833 PHACTR3Q96KR7 559 aa23.11■■□□□ 1.29
TRIM29-219ENST00000532833 TAF1DQ9H5J8 278 aaPredicted RBP23.11■■□□□ 1.29
TRIM29-219ENST00000532833 BTBD11A6QL63 1104 aa23.1■■□□□ 1.29
TRIM29-219ENST00000532833 CNGB1Q14028 1251 aaPredicted RBP23.1■■□□□ 1.29
TRIM29-219ENST00000532833 LDHDQ86WU2 507 aa23.1■■□□□ 1.29
TRIM29-219ENST00000532833 IQCA1LA6NCM1 817 aa23.09■■□□□ 1.29
TRIM29-219ENST00000532833 OLFM4Q6UX06 510 aa23.09■■□□□ 1.29
TRIM29-219ENST00000532833 ZNF541Q9H0D2 1346 aa23.08■■□□□ 1.29
TRIM29-219ENST00000532833 ITGBL1O95965 494 aaPredicted RBP23.08■■□□□ 1.29
TRIM29-219ENST00000532833 CCDC93Q567U6 631 aa23.08■■□□□ 1.29
TRIM29-219ENST00000532833 NBPF5PQ86XG9 351 aaPredicted RBP23.08■■□□□ 1.29
TRIM29-219ENST00000532833 CLEC4GQ6UXB4 293 aa23.07■■□□□ 1.28
TRIM29-219ENST00000532833 ZNF277Q9NRM2 450 aaPredicted RBP23.07■■□□□ 1.28
TRIM29-219ENST00000532833 KLRG2A4D1S0 409 aaPredicted RBP23.06■■□□□ 1.28
TRIM29-219ENST00000532833 NPR1P16066 1061 aa23.06■■□□□ 1.28
TRIM29-219ENST00000532833 VEGFBP49765 207 aa23.06■■□□□ 1.28
TRIM29-219ENST00000532833 PRKAR2BP31323 418 aa23.05■■□□□ 1.28
TRIM29-219ENST00000532833 FKBP4Q02790 459 aaKnown RBP eCLIP23.05■■□□□ 1.28
TRIM29-219ENST00000532833 EAPPQ56P03 285 aaPredicted RBP23.05■■□□□ 1.28
TRIM29-219ENST00000532833 ADAMTSL1Q8N6G6 1762 aa23.04■■□□□ 1.28
TRIM29-219ENST00000532833 NPC1L1Q9UHC9 1359 aa23.04■■□□□ 1.28
TRIM29-219ENST00000532833 TMEM88BA6NKF7 163 aa23.04■■□□□ 1.28
TRIM29-219ENST00000532833 RSPH6AQ9H0K4 717 aa23.04■■□□□ 1.28
TRIM29-219ENST00000532833 PRDM10Q9NQV6 1147 aa23.04■■□□□ 1.28
TRIM29-219ENST00000532833 NBPF26B4DH59 902 aa23.03■■□□□ 1.28
TRIM29-219ENST00000532833 NBPF10Q6P3W6 841 aaKnown RBP23.03■■□□□ 1.28
TRIM29-219ENST00000532833 NBPF15Q8N660 670 aa23.03■■□□□ 1.28
TRIM29-219ENST00000532833 HACL1Q9UJ83 578 aa23.03■■□□□ 1.28
TRIM29-219ENST00000532833 SNRPA1P09661 255 aaKnown RBP23.02■■□□□ 1.28
TRIM29-219ENST00000532833 NIP7Q9Y221 180 aaKnown RBP eCLIP23.02■■□□□ 1.28
TRIM29-219ENST00000532833 ZNF652Q9Y2D9 606 aa23.02■■□□□ 1.28
TRIM29-219ENST00000532833 FAM177BA6PVY3 158 aa23.01■■□□□ 1.27
TRIM29-219ENST00000532833 EPHX2P34913 555 aa23.01■■□□□ 1.27
TRIM29-219ENST00000532833 TPTE2Q6XPS3 522 aa23.01■■□□□ 1.27
TRIM29-219ENST00000532833 MCM10Q7L590 875 aa23.01■■□□□ 1.27
TRIM29-219ENST00000532833 CCER1Q8TC90 406 aaPredicted RBP23.01■■□□□ 1.27
TRIM29-219ENST00000532833 CLEC11AQ9Y240 323 aa23.01■■□□□ 1.27
TRIM29-219ENST00000532833 RNF123Q5XPI4 1314 aa23.01■■□□□ 1.27
TRIM29-219ENST00000532833 CTCFP49711 727 aaPredicted RBP23■■□□□ 1.27
TRIM29-219ENST00000532833 HLFQ16534 295 aa23■■□□□ 1.27
TRIM29-219ENST00000532833 WBP1LQ9NX94 342 aa23■■□□□ 1.27
TRIM29-219ENST00000532833 FZD9O00144 591 aa22.99■■□□□ 1.27
TRIM29-219ENST00000532833 MAP1SQ66K74 1059 aaPredicted RBP22.99■■□□□ 1.27
TRIM29-219ENST00000532833 RTKN2Q8IZC4 609 aa22.99■■□□□ 1.27
TRIM29-219ENST00000532833 SYNE4Q8N205 404 aa22.99■■□□□ 1.27
TRIM29-219ENST00000532833 AIDAQ96BJ3 306 aa22.99■■□□□ 1.27
TRIM29-219ENST00000532833 IARSP41252 1262 aaKnown RBP22.98■■□□□ 1.27
TRIM29-219ENST00000532833 LBX1P52954 281 aa22.98■■□□□ 1.27
TRIM29-219ENST00000532833 DCTN1Q14203 1278 aa22.98■■□□□ 1.27
TRIM29-219ENST00000532833 CNTROBQ8N137 903 aa22.98■■□□□ 1.27
TRIM29-219ENST00000532833 SNED1Q8TER0 1413 aa22.98■■□□□ 1.27
TRIM29-219ENST00000532833 RASSF10A6NK89 507 aa22.96■■□□□ 1.27
TRIM29-219ENST00000532833 RGL2O15211 777 aa22.95■■□□□ 1.26
TRIM29-219ENST00000532833 COL4A5P29400 1685 aa22.95■■□□□ 1.26
TRIM29-219ENST00000532833 ALDH1B1P30837 517 aa22.95■■□□□ 1.26
TRIM29-219ENST00000532833 DEFB115Q30KQ5 88 aa22.95■■□□□ 1.26
TRIM29-219ENST00000532833 PNMA8AQ86V59 439 aaPredicted RBP22.95■■□□□ 1.26
TRIM29-219ENST00000532833 RTF1Q92541 710 aaKnown RBP22.95■■□□□ 1.26
TRIM29-219ENST00000532833 GPC2Q8N158 579 aa22.94■■□□□ 1.26
TRIM29-219ENST00000532833 LTBP1Q14766 1721 aa22.94■■□□□ 1.26
TRIM29-219ENST00000532833 ABCC12Q96J65 1359 aa22.93■■□□□ 1.26
TRIM29-219ENST00000532833 WDR33Q9C0J8 1336 aaKnown RBP22.92■■□□□ 1.26
TRIM29-219ENST00000532833 U2AF1L5P0DN76 240 aaPredicted RBP22.92■■□□□ 1.26
TRIM29-219ENST00000532833 HSPA8P11142 646 aaKnown RBP22.92■■□□□ 1.26
TRIM29-219ENST00000532833 GTF2E1P29083 439 aaPredicted RBP22.92■■□□□ 1.26
TRIM29-219ENST00000532833 U2AF1Q01081 240 aaKnown RBP eCLIP22.92■■□□□ 1.26
TRIM29-219ENST00000532833 CRY2Q49AN0 593 aa22.92■■□□□ 1.26
TRIM29-219ENST00000532833 SLC51AQ86UW1 340 aa22.92■■□□□ 1.26
TRIM29-219ENST00000532833 NUTM1Q86Y26 1132 aa22.92■■□□□ 1.26
TRIM29-219ENST00000532833 CFAP53Q96M91 514 aa22.92■■□□□ 1.26
TRIM29-219ENST00000532833 PSMD1Q99460 953 aa22.92■■□□□ 1.26
TRIM29-219ENST00000532833 MIS18AQ9NYP9 233 aa22.92■■□□□ 1.26
TRIM29-219ENST00000532833 FMR1Q06787 632 aaKnown RBP eCLIP22.91■■□□□ 1.26
TRIM29-219ENST00000532833 NUP98P52948 1817 aa22.91■■□□□ 1.26
TRIM29-219ENST00000532833 NGEFQ8N5V2 710 aa22.9■■□□□ 1.26
TRIM29-219ENST00000532833 JDP2Q8WYK2 163 aa22.9■■□□□ 1.26
TRIM29-219ENST00000532833 DDX21Q9NR30 783 aaKnown RBP eCLIP22.9■■□□□ 1.26
TRIM29-219ENST00000532833 NUDCQ9Y266 331 aa22.9■■□□□ 1.26
TRIM29-219ENST00000532833 GJA3Q9Y6H8 435 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms