RNA–Protein interactions for RNA: ENST00000532793.1

PPFIA1-223, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-223ENST00000532793 NPC1L1Q9UHC9 1359 aa12.94□□□□□ -0.34
PPFIA1-223ENST00000532793 TEFQ10587 303 aa12.93□□□□□ -0.34
PPFIA1-223ENST00000532793 SLC39A6Q13433 755 aa12.93□□□□□ -0.34
PPFIA1-223ENST00000532793 FKBP8Q14318 412 aa12.93□□□□□ -0.34
PPFIA1-223ENST00000532793 NPM2Q86SE8 214 aaKnown RBP12.93□□□□□ -0.34
PPFIA1-223ENST00000532793 GAS2L2Q8NHY3 880 aa12.93□□□□□ -0.34
PPFIA1-223ENST00000532793 COL15A1P39059 1388 aa12.93□□□□□ -0.34
PPFIA1-223ENST00000532793 AFDNP55196 1824 aaKnown RBP12.92□□□□□ -0.34
PPFIA1-223ENST00000532793 USPL1Q5W0Q7 1092 aa12.92□□□□□ -0.34
PPFIA1-223ENST00000532793 INTS5Q6P9B9 1019 aaKnown RBP12.92□□□□□ -0.34
PPFIA1-223ENST00000532793 VSIG10Q8N0Z9 540 aa12.92□□□□□ -0.34
PPFIA1-223ENST00000532793 KCPQ6ZWJ8 1503 aa12.92□□□□□ -0.34
PPFIA1-223ENST00000532793 SOS1Q07889 1333 aaPredicted RBP12.91□□□□□ -0.34
PPFIA1-223ENST00000532793 GNAT3A8MTJ3 354 aa12.91□□□□□ -0.34
PPFIA1-223ENST00000532793 STARD3NLO95772 234 aa12.91□□□□□ -0.34
PPFIA1-223ENST00000532793 CYP19A1P11511 503 aaPredicted RBP12.91□□□□□ -0.34
PPFIA1-223ENST00000532793 DALRD3Q5D0E6 543 aaKnown RBP12.91□□□□□ -0.34
PPFIA1-223ENST00000532793 NUDCQ9Y266 331 aa12.91□□□□□ -0.34
PPFIA1-223ENST00000532793 SIPA1L3O60292 1781 aaPredicted RBP12.91□□□□□ -0.34
PPFIA1-223ENST00000532793 CANXP27824 592 aaKnown RBP12.9□□□□□ -0.34
PPFIA1-223ENST00000532793 NARFQ9UHQ1 456 aa12.9□□□□□ -0.34
PPFIA1-223ENST00000532793 COL3A1P02461 1466 aaPredicted RBP12.9□□□□□ -0.34
PPFIA1-223ENST00000532793 DLEC1Q9Y238 1755 aa12.89□□□□□ -0.35
PPFIA1-223ENST00000532793 UTRNP46939 3433 aa12.89□□□□□ -0.35
PPFIA1-223ENST00000532793 A0A087WZG4 1122 aa12.89□□□□□ -0.35
PPFIA1-223ENST00000532793 POLRMTO00411 1230 aaKnown RBP12.89□□□□□ -0.35
PPFIA1-223ENST00000532793 DDR1Q08345 913 aa12.89□□□□□ -0.35
PPFIA1-223ENST00000532793 PDCD7Q8N8D1 485 aaKnown RBP12.89□□□□□ -0.35
PPFIA1-223ENST00000532793 TEX13AQ9BXU3 409 aaPredicted RBP12.89□□□□□ -0.35
PPFIA1-223ENST00000532793 ZBTB1Q9Y2K1 713 aa12.89□□□□□ -0.35
PPFIA1-223ENST00000532793 ZNF330Q9Y3S2 320 aaPredicted RBP12.89□□□□□ -0.35
PPFIA1-223ENST00000532793 HSPA6P17066 643 aa12.88□□□□□ -0.35
PPFIA1-223ENST00000532793 C16orf71Q8IYS4 520 aaPredicted RBP12.88□□□□□ -0.35
PPFIA1-223ENST00000532793 NRXN2Q9P2S2 1712 aa12.88□□□□□ -0.35
PPFIA1-223ENST00000532793 SBF1O95248 1867 aa12.87□□□□□ -0.35
PPFIA1-223ENST00000532793 SCN7AQ01118 1682 aa12.87□□□□□ -0.35
PPFIA1-223ENST00000532793 NPHP1O15259 732 aa12.87□□□□□ -0.35
PPFIA1-223ENST00000532793 NEFMP07197 916 aa12.87□□□□□ -0.35
PPFIA1-223ENST00000532793 TM4SF1P30408 202 aa12.87□□□□□ -0.35
PPFIA1-223ENST00000532793 CHRNA5P30532 468 aa12.87□□□□□ -0.35
PPFIA1-223ENST00000532793 FMNL2Q96PY5 1086 aa12.87□□□□□ -0.35
PPFIA1-223ENST00000532793 KDM2BQ8NHM5 1336 aa12.87□□□□□ -0.35
PPFIA1-223ENST00000532793 HEG1Q9ULI3 1381 aa12.86□□□□□ -0.35
PPFIA1-223ENST00000532793 SERPINB2P05120 415 aa12.86□□□□□ -0.35
PPFIA1-223ENST00000532793 PRKAR2BP31323 418 aa12.86□□□□□ -0.35
PPFIA1-223ENST00000532793 NFIXQ14938 502 aa12.86□□□□□ -0.35
PPFIA1-223ENST00000532793 C9orf131Q5VYM1 1079 aa12.86□□□□□ -0.35
PPFIA1-223ENST00000532793 ZNF790Q6PG37 636 aa12.86□□□□□ -0.35
PPFIA1-223ENST00000532793 BICDL1Q6ZP65 573 aa12.86□□□□□ -0.35
PPFIA1-223ENST00000532793 RTF1Q92541 710 aaKnown RBP12.86□□□□□ -0.35
PPFIA1-223ENST00000532793 RNF181Q9P0P0 153 aa12.86□□□□□ -0.35
PPFIA1-223ENST00000532793 CCDC88AQ3V6T2 1871 aa12.86□□□□□ -0.35
PPFIA1-223ENST00000532793 TNRC6CQ9HCJ0 1690 aaKnown RBP12.86□□□□□ -0.35
PPFIA1-223ENST00000532793 BTBD11A6QL63 1104 aa12.85□□□□□ -0.35
PPFIA1-223ENST00000532793 KIF3CO14782 793 aa12.85□□□□□ -0.35
PPFIA1-223ENST00000532793 TOMM70O94826 608 aa12.85□□□□□ -0.35
PPFIA1-223ENST00000532793 U2AF1L5P0DN76 240 aaPredicted RBP12.85□□□□□ -0.35
PPFIA1-223ENST00000532793 KCNA3P22001 575 aa12.85□□□□□ -0.35
PPFIA1-223ENST00000532793 U2AF1Q01081 240 aaKnown RBP eCLIP12.85□□□□□ -0.35
PPFIA1-223ENST00000532793 CACNA1SQ13698 1873 aa12.85□□□□□ -0.35
PPFIA1-223ENST00000532793 IL17REQ8NFR9 667 aa12.84□□□□□ -0.35
PPFIA1-223ENST00000532793 RNF166Q96A37 237 aaPredicted RBP12.84□□□□□ -0.35
PPFIA1-223ENST00000532793 ZNF496Q96IT1 587 aaPredicted RBP12.84□□□□□ -0.35
PPFIA1-223ENST00000532793 H0YIN7 160 aa12.83□□□□□ -0.36
PPFIA1-223ENST00000532793 IL6STP40189 918 aaPredicted RBP12.83□□□□□ -0.36
PPFIA1-223ENST00000532793 EIF5P55010 431 aaKnown RBP12.83□□□□□ -0.36
PPFIA1-223ENST00000532793 C2CD5Q86YS7 1000 aa12.83□□□□□ -0.36
PPFIA1-223ENST00000532793 TTLL6Q8N841 843 aa12.83□□□□□ -0.36
PPFIA1-223ENST00000532793 BCORQ6W2J9 1755 aa12.83□□□□□ -0.36
PPFIA1-223ENST00000532793 TIAM2Q8IVF5 1701 aa12.82□□□□□ -0.36
PPFIA1-223ENST00000532793 APLP1P51693 650 aa12.82□□□□□ -0.36
PPFIA1-223ENST00000532793 RSPH6AQ9H0K4 717 aa12.82□□□□□ -0.36
PPFIA1-223ENST00000532793 NMRK2Q9NPI5 230 aa12.82□□□□□ -0.36
PPFIA1-223ENST00000532793 PDZRN3Q9UPQ7 1066 aa12.82□□□□□ -0.36
PPFIA1-223ENST00000532793 CARMIL3Q8ND23 1372 aa12.81□□□□□ -0.36
PPFIA1-223ENST00000532793 CEMIPQ8WUJ3 1361 aa12.81□□□□□ -0.36
PPFIA1-223ENST00000532793 ANKRD31Q8N7Z5 1873 aa12.81□□□□□ -0.36
PPFIA1-223ENST00000532793 PPP2R1AP30153 589 aa12.81□□□□□ -0.36
PPFIA1-223ENST00000532793 PDE6BP35913 854 aa12.81□□□□□ -0.36
PPFIA1-223ENST00000532793 C3orf67Q6ZVT6 689 aa12.81□□□□□ -0.36
PPFIA1-223ENST00000532793 BCL2L12Q9HB09 334 aa12.81□□□□□ -0.36
PPFIA1-223ENST00000532793 TBC1D2BQ9UPU7 963 aa12.81□□□□□ -0.36
PPFIA1-223ENST00000532793 GOLGB1Q14789 3259 aaKnown RBP12.81□□□□□ -0.36
PPFIA1-223ENST00000532793 DLG5Q8TDM6 1919 aa12.8□□□□□ -0.36
PPFIA1-223ENST00000532793 WDR90Q96KV7 1748 aa12.8□□□□□ -0.36
PPFIA1-223ENST00000532793 ST5P78524 1137 aa12.8□□□□□ -0.36
PPFIA1-223ENST00000532793 TBC1D9BQ66K14 1250 aa12.8□□□□□ -0.36
PPFIA1-223ENST00000532793 ZNF622Q969S3 477 aaKnown RBP eCLIP12.8□□□□□ -0.361e-6■■□□□ 11.7
PPFIA1-223ENST00000532793 PHACTR3Q96KR7 559 aa12.8□□□□□ -0.36
PPFIA1-223ENST00000532793 SETDB2Q96T68 719 aa12.8□□□□□ -0.36
PPFIA1-223ENST00000532793 ZC3H4Q9UPT8 1303 aaKnown RBP12.8□□□□□ -0.36
PPFIA1-223ENST00000532793 LAMB4A4D0S4 1761 aa12.79□□□□□ -0.36
PPFIA1-223ENST00000532793 A1BGP04217 495 aa12.79□□□□□ -0.36
PPFIA1-223ENST00000532793 LMNB1P20700 586 aa12.79□□□□□ -0.36
PPFIA1-223ENST00000532793 DZIP3Q86Y13 1208 aaKnown RBP12.79□□□□□ -0.36
PPFIA1-223ENST00000532793 CNBD1Q8NA66 436 aa12.79□□□□□ -0.36
PPFIA1-223ENST00000532793 RBM46Q8TBY0 533 aaKnown RBP12.79□□□□□ -0.36
PPFIA1-223ENST00000532793 ZNF652Q9Y2D9 606 aa12.79□□□□□ -0.36
PPFIA1-223ENST00000532793 COL11A2P13942 1736 aaPredicted RBP12.79□□□□□ -0.36
PPFIA1-223ENST00000532793 DICER1Q9UPY3 1922 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms