RNA–Protein interactions for RNA: ENST00000532409.5

CTSB-225, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-225ENST00000532409 LRP10Q7Z4F1 713 aa20.25■□□□□ 0.83
CTSB-225ENST00000532409 CFAP44Q96MT7 982 aa20.25■□□□□ 0.83
CTSB-225ENST00000532409 ZNF853P0CG23 659 aa20.24■□□□□ 0.83
CTSB-225ENST00000532409 ZNF784Q8NCA9 323 aaPredicted RBP20.24■□□□□ 0.83
CTSB-225ENST00000532409 ZBTB3Q9H5J0 574 aa20.24■□□□□ 0.83
CTSB-225ENST00000532409 PIM2Q9P1W9 311 aa20.24■□□□□ 0.83
CTSB-225ENST00000532409 ZNF652Q9Y2D9 606 aa20.24■□□□□ 0.83
CTSB-225ENST00000532409 FAM177BA6PVY3 158 aa20.23■□□□□ 0.83
CTSB-225ENST00000532409 CLEC4GQ6UXB4 293 aa20.23■□□□□ 0.83
CTSB-225ENST00000532409 C2CD5Q86YS7 1000 aa20.23■□□□□ 0.83
CTSB-225ENST00000532409 CNBD1Q8NA66 436 aa20.23■□□□□ 0.83
CTSB-225ENST00000532409 NIP7Q9Y221 180 aaKnown RBP eCLIP20.23■□□□□ 0.832e-6■■■■□ 20.4
CTSB-225ENST00000532409 ERBB4Q15303 1308 aa20.23■□□□□ 0.83
CTSB-225ENST00000532409 MAP3K15Q6ZN16 1313 aa20.23■□□□□ 0.83
CTSB-225ENST00000532409 COL11A2P13942 1736 aaPredicted RBP20.22■□□□□ 0.83
CTSB-225ENST00000532409 KIF6Q6ZMV9 814 aa20.22■□□□□ 0.83
CTSB-225ENST00000532409 NUP98P52948 1817 aa20.22■□□□□ 0.83
CTSB-225ENST00000532409 DALRD3Q5D0E6 543 aaKnown RBP20.21■□□□□ 0.83
CTSB-225ENST00000532409 NBPF5PQ86XG9 351 aaPredicted RBP20.21■□□□□ 0.83
CTSB-225ENST00000532409 IFT57Q9NWB7 429 aa20.21■□□□□ 0.83
CTSB-225ENST00000532409 DLEC1Q9Y238 1755 aa20.21■□□□□ 0.83
CTSB-225ENST00000532409 ARFGEF1Q9Y6D6 1849 aa20.2■□□□□ 0.82
CTSB-225ENST00000532409 NPHP1O15259 732 aa20.2■□□□□ 0.82
CTSB-225ENST00000532409 GPTP24298 496 aa20.2■□□□□ 0.82
CTSB-225ENST00000532409 DUSP27Q5VZP5 1158 aa20.2■□□□□ 0.82
CTSB-225ENST00000532409 ARHGAP27Q6ZUM4 889 aa20.2■□□□□ 0.82
CTSB-225ENST00000532409 CHPF2Q9P2E5 772 aa20.2■□□□□ 0.82
CTSB-225ENST00000532409 SALL2Q9Y467 1007 aaPredicted RBP20.2■□□□□ 0.82
CTSB-225ENST00000532409 ERVV-1B6SEH8 477 aa20.19■□□□□ 0.82
CTSB-225ENST00000532409 ELL2O00472 640 aaPredicted RBP20.19■□□□□ 0.82
CTSB-225ENST00000532409 HDGFL1Q5TGJ6 251 aa20.19■□□□□ 0.82
CTSB-225ENST00000532409 FAM9BQ8IZU0 186 aa20.19■□□□□ 0.82
CTSB-225ENST00000532409 BRIP1Q9BX63 1249 aa20.19■□□□□ 0.82
CTSB-225ENST00000532409 H0YIN7 160 aa20.18■□□□□ 0.82
CTSB-225ENST00000532409 RGL2O15211 777 aa20.18■□□□□ 0.82
CTSB-225ENST00000532409 GNAI1P63096 354 aa20.18■□□□□ 0.82
CTSB-225ENST00000532409 AIMP1Q12904 312 aaKnown RBP20.18■□□□□ 0.82
CTSB-225ENST00000532409 WWC1Q8IX03 1113 aa20.18■□□□□ 0.82
CTSB-225ENST00000532409 XAGE3Q8WTP9 111 aa20.18■□□□□ 0.82
CTSB-225ENST00000532409 TSR2Q969E8 191 aaKnown RBP20.18■□□□□ 0.82
CTSB-225ENST00000532409 ST5P78524 1137 aa20.17■□□□□ 0.82
CTSB-225ENST00000532409 CALD1Q05682 793 aaKnown RBP20.17■□□□□ 0.82
CTSB-225ENST00000532409 COPS6Q7L5N1 327 aa20.17■□□□□ 0.82
CTSB-225ENST00000532409 C8orf58Q8NAV2 365 aa20.17■□□□□ 0.82
CTSB-225ENST00000532409 UBN2Q6ZU65 1347 aa20.17■□□□□ 0.82
CTSB-225ENST00000532409 ATP10DQ9P241 1426 aa20.17■□□□□ 0.82
CTSB-225ENST00000532409 PDE6BP35913 854 aa20.16■□□□□ 0.82
CTSB-225ENST00000532409 ZNF622Q969S3 477 aaKnown RBP eCLIP20.16■□□□□ 0.82
CTSB-225ENST00000532409 DDX21Q9NR30 783 aaKnown RBP eCLIP20.16■□□□□ 0.82
CTSB-225ENST00000532409 HOXB7P09629 217 aa20.15■□□□□ 0.82
CTSB-225ENST00000532409 CCDC27Q2M243 656 aa20.15■□□□□ 0.82
CTSB-225ENST00000532409 NUTM1Q86Y26 1132 aa20.15■□□□□ 0.82
CTSB-225ENST00000532409 ADCY9O60503 1353 aa20.15■□□□□ 0.82
CTSB-225ENST00000532409 ABCC12Q96J65 1359 aa20.15■□□□□ 0.82
CTSB-225ENST00000532409 TNRC6CQ9HCJ0 1690 aaKnown RBP20.14■□□□□ 0.81
CTSB-225ENST00000532409 SUSD4Q5VX71 490 aa20.14■□□□□ 0.81
CTSB-225ENST00000532409 TPTE2Q6XPS3 522 aa20.14■□□□□ 0.81
CTSB-225ENST00000532409 GIGYF2Q6Y7W6 1299 aaKnown RBP20.14■□□□□ 0.81
CTSB-225ENST00000532409 ZNF34Q8IZ26 560 aa20.14■□□□□ 0.81
CTSB-225ENST00000532409 TSPYL6Q8N831 410 aa20.14■□□□□ 0.81
CTSB-225ENST00000532409 TTLL6Q8N841 843 aa20.14■□□□□ 0.81
CTSB-225ENST00000532409 ZNF428Q96B54 188 aa20.14■□□□□ 0.81
CTSB-225ENST00000532409 ZNF219Q9P2Y4 722 aaPredicted RBP20.13■□□□□ 0.81
CTSB-225ENST00000532409 CACNA1SQ13698 1873 aa20.12■□□□□ 0.81
CTSB-225ENST00000532409 SRGNP10124 158 aa20.12■□□□□ 0.81
CTSB-225ENST00000532409 RASSF7Q02833 373 aa20.12■□□□□ 0.81
CTSB-225ENST00000532409 ERFEQ4G0M1 354 aa20.12■□□□□ 0.81
CTSB-225ENST00000532409 ZNF526Q8TF50 670 aaPredicted RBP20.12■□□□□ 0.81
CTSB-225ENST00000532409 GTF2E1P29083 439 aaPredicted RBP20.11■□□□□ 0.81
CTSB-225ENST00000532409 DBF4Q9UBU7 674 aaPredicted RBP20.11■□□□□ 0.81
CTSB-225ENST00000532409 SLX4Q8IY92 1834 aa20.11■□□□□ 0.81
CTSB-225ENST00000532409 ANKRD36CQ5JPF3 1778 aa20.09■□□□□ 0.81
CTSB-225ENST00000532409 C21orf2O43822 256 aa20.09■□□□□ 0.81
CTSB-225ENST00000532409 NTSR2O95665 410 aa20.09■□□□□ 0.81
CTSB-225ENST00000532409 PRELPP51888 382 aa20.09■□□□□ 0.81
CTSB-225ENST00000532409 C9orf131Q5VYM1 1079 aa20.09■□□□□ 0.81
CTSB-225ENST00000532409 STYK1Q6J9G0 422 aa20.09■□□□□ 0.81
CTSB-225ENST00000532409 PDZRN3Q9UPQ7 1066 aa20.09■□□□□ 0.81
CTSB-225ENST00000532409 KLRG2A4D1S0 409 aaPredicted RBP20.08■□□□□ 0.81
CTSB-225ENST00000532409 TCERG1O14776 1098 aaKnown RBP20.08■□□□□ 0.81
CTSB-225ENST00000532409 PRPF40BQ6NWY9 871 aaKnown RBP20.08■□□□□ 0.81
CTSB-225ENST00000532409 C3orf67Q6ZVT6 689 aa20.08■□□□□ 0.81
CTSB-225ENST00000532409 MASTLQ96GX5 879 aa20.08■□□□□ 0.81
CTSB-225ENST00000532409 NYXQ9GZU5 481 aa20.08■□□□□ 0.81
CTSB-225ENST00000532409 PHAXQ9H814 394 aaKnown RBP20.08■□□□□ 0.81
CTSB-225ENST00000532409 SPINK5Q9NQ38 1064 aaPredicted RBP20.08■□□□□ 0.81
CTSB-225ENST00000532409 SBF1O95248 1867 aa20.07■□□□□ 0.8
CTSB-225ENST00000532409 FANCIQ9NVI1 1328 aa20.07■□□□□ 0.8
CTSB-225ENST00000532409 HYPKQ9NX55 129 aa20.07■□□□□ 0.8
CTSB-225ENST00000532409 IBTKQ9P2D0 1353 aaPredicted RBP20.07■□□□□ 0.8
CTSB-225ENST00000532409 IL16Q14005 1332 aa20.06■□□□□ 0.8
CTSB-225ENST00000532409 NFKBIEO00221 500 aa20.06■□□□□ 0.8
CTSB-225ENST00000532409 NPR1P16066 1061 aa20.06■□□□□ 0.8
CTSB-225ENST00000532409 TCIRG1Q13488 830 aa20.06■□□□□ 0.8
CTSB-225ENST00000532409 NCBP3Q53F19 620 aaKnown RBP20.06■□□□□ 0.8
CTSB-225ENST00000532409 NLRP10Q86W26 655 aa20.06■□□□□ 0.8
CTSB-225ENST00000532409 SYNE4Q8N205 404 aa20.06■□□□□ 0.8
CTSB-225ENST00000532409 PLBD2Q8NHP8 589 aa20.06■□□□□ 0.8
CTSB-225ENST00000532409 CNKSR1Q969H4 720 aa20.06■□□□□ 0.8
CTSB-225ENST00000532409 RNF181Q9P0P0 153 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms