RNA–Protein interactions for RNA: ENST00000532181.5

SSH3-208, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 3

Gene SSH3, Length 948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-208ENST00000532181 IL16Q14005 1332 aa16.03■□□□□ 0.16
SSH3-208ENST00000532181 MYL6BP14649 208 aa16.03■□□□□ 0.16
SSH3-208ENST00000532181 NFIXQ14938 502 aa16.03■□□□□ 0.16
SSH3-208ENST00000532181 NGEFQ8N5V2 710 aa16.03■□□□□ 0.16
SSH3-208ENST00000532181 FANCIQ9NVI1 1328 aa16.02■□□□□ 0.16
SSH3-208ENST00000532181 KCNA3P22001 575 aa16.02■□□□□ 0.16
SSH3-208ENST00000532181 CHRNA5P30532 468 aa16.02■□□□□ 0.16
SSH3-208ENST00000532181 CALD1Q05682 793 aaKnown RBP16.02■□□□□ 0.16
SSH3-208ENST00000532181 BICDL1Q6ZP65 573 aa16.02■□□□□ 0.16
SSH3-208ENST00000532181 CDCA7LQ96GN5 454 aa16.02■□□□□ 0.16
SSH3-208ENST00000532181 AFDNP55196 1824 aaKnown RBP16.02■□□□□ 0.16
SSH3-208ENST00000532181 ATP10DQ9P241 1426 aa16.02■□□□□ 0.15
SSH3-208ENST00000532181 HLFQ16534 295 aa16.01■□□□□ 0.15
SSH3-208ENST00000532181 TBC1D9BQ66K14 1250 aa16.01■□□□□ 0.15
SSH3-208ENST00000532181 DZIP3Q86Y13 1208 aaKnown RBP16.01■□□□□ 0.15
SSH3-208ENST00000532181 ZNF526Q8TF50 670 aaPredicted RBP16.01■□□□□ 0.15
SSH3-208ENST00000532181 BRCA1P38398 1863 aaKnown RBP16.01■□□□□ 0.15
SSH3-208ENST00000532181 CHPF2Q9P2E5 772 aa16■□□□□ 0.15
SSH3-208ENST00000532181 TCERG1O14776 1098 aaKnown RBP15.99■□□□□ 0.15
SSH3-208ENST00000532181 SERPINB2P05120 415 aa15.99■□□□□ 0.15
SSH3-208ENST00000532181 ARHGAP27Q6ZUM4 889 aa15.99■□□□□ 0.15
SSH3-208ENST00000532181 A0A087WZG4 1122 aa15.98■□□□□ 0.15
SSH3-208ENST00000532181 EXOSC9Q06265 439 aaKnown RBP15.98■□□□□ 0.15
SSH3-208ENST00000532181 HDGFL1Q5TGJ6 251 aa15.98■□□□□ 0.15
SSH3-208ENST00000532181 HOXB7P09629 217 aa15.97■□□□□ 0.15
SSH3-208ENST00000532181 C1QTNF8P60827 252 aa15.97■□□□□ 0.15
SSH3-208ENST00000532181 CCDC24Q8N4L8 307 aa15.97■□□□□ 0.15
SSH3-208ENST00000532181 DDX21Q9NR30 783 aaKnown RBP eCLIP15.97■□□□□ 0.15
SSH3-208ENST00000532181 PIM2Q9P1W9 311 aa15.97■□□□□ 0.15
SSH3-208ENST00000532181 SCN7AQ01118 1682 aa15.97■□□□□ 0.15
SSH3-208ENST00000532181 ADCY9O60503 1353 aa15.97■□□□□ 0.15
SSH3-208ENST00000532181 ERBB4Q15303 1308 aa15.96■□□□□ 0.15
SSH3-208ENST00000532181 VAMP4O75379 141 aa15.96■□□□□ 0.15
SSH3-208ENST00000532181 SLFN5Q08AF3 891 aa15.96■□□□□ 0.15
SSH3-208ENST00000532181 COPS6Q7L5N1 327 aa15.96■□□□□ 0.15
SSH3-208ENST00000532181 XAGE3Q8WTP9 111 aa15.96■□□□□ 0.15
SSH3-208ENST00000532181 ZBTB3Q9H5J0 574 aa15.96■□□□□ 0.15
SSH3-208ENST00000532181 PHAXQ9H814 394 aaKnown RBP15.96■□□□□ 0.15
SSH3-208ENST00000532181 CARMIL3Q8ND23 1372 aa15.96■□□□□ 0.15
SSH3-208ENST00000532181 NRXN2Q9P2S2 1712 aa15.96■□□□□ 0.15
SSH3-208ENST00000532181 BCORQ6W2J9 1755 aa15.95■□□□□ 0.14
SSH3-208ENST00000532181 AIMP1Q12904 312 aaKnown RBP15.95■□□□□ 0.14
SSH3-208ENST00000532181 TWISTNBQ3B726 338 aaPredicted RBP15.95■□□□□ 0.14
SSH3-208ENST00000532181 DALRD3Q5D0E6 543 aaKnown RBP15.95■□□□□ 0.14
SSH3-208ENST00000532181 TRMT2AQ8IZ69 625 aaKnown RBP15.95■□□□□ 0.14
SSH3-208ENST00000532181 MAP3K15Q6ZN16 1313 aa15.94■□□□□ 0.14
SSH3-208ENST00000532181 ARFGEF1Q9Y6D6 1849 aa15.94■□□□□ 0.14
SSH3-208ENST00000532181 G2E3Q7L622 706 aa15.94■□□□□ 0.14
SSH3-208ENST00000532181 GPBP1L1Q9HC44 474 aaPredicted RBP15.94■□□□□ 0.14
SSH3-208ENST00000532181 GOLGA2Q08379 1002 aa15.93■□□□□ 0.14
SSH3-208ENST00000532181 ERVV-1B6SEH8 477 aa15.92■□□□□ 0.14
SSH3-208ENST00000532181 CLEC4GQ6UXB4 293 aa15.92■□□□□ 0.14
SSH3-208ENST00000532181 NPM2Q86SE8 214 aaKnown RBP15.92■□□□□ 0.14
SSH3-208ENST00000532181 C2CD5Q86YS7 1000 aa15.92■□□□□ 0.14
SSH3-208ENST00000532181 ZNF428Q96B54 188 aa15.92■□□□□ 0.14
SSH3-208ENST00000532181 DBF4Q9UBU7 674 aaPredicted RBP15.92■□□□□ 0.14
SSH3-208ENST00000532181 UBN2Q6ZU65 1347 aa15.92■□□□□ 0.14
SSH3-208ENST00000532181 ANKRD31Q8N7Z5 1873 aa15.91■□□□□ 0.14
SSH3-208ENST00000532181 GPTP24298 496 aa15.9■□□□□ 0.14
SSH3-208ENST00000532181 HNRNPUQ00839 825 aaKnown RBP eCLIP15.9■□□□□ 0.14
SSH3-208ENST00000532181 C9orf131Q5VYM1 1079 aa15.9■□□□□ 0.14
SSH3-208ENST00000532181 PRR5LQ6MZQ0 368 aa15.9■□□□□ 0.14
SSH3-208ENST00000532181 GIGYF2Q6Y7W6 1299 aaKnown RBP15.9■□□□□ 0.14
SSH3-208ENST00000532181 ZNF34Q8IZ26 560 aa15.9■□□□□ 0.14
SSH3-208ENST00000532181 MYH16Q9H6N6 1097 aa15.9■□□□□ 0.14
SSH3-208ENST00000532181 FAM177BA6PVY3 158 aa15.89■□□□□ 0.13
SSH3-208ENST00000532181 E9PSI1 815 aa15.89■□□□□ 0.13
SSH3-208ENST00000532181 CCDC30Q5VVM6 783 aa15.89■□□□□ 0.13
SSH3-208ENST00000532181 SUSD4Q5VX71 490 aa15.89■□□□□ 0.13
SSH3-208ENST00000532181 SETDB2Q96T68 719 aa15.89■□□□□ 0.13
SSH3-208ENST00000532181 HYPKQ9NX55 129 aa15.89■□□□□ 0.13
SSH3-208ENST00000532181 ZNF219Q9P2Y4 722 aaPredicted RBP15.89■□□□□ 0.13
SSH3-208ENST00000532181 NIP7Q9Y221 180 aaKnown RBP eCLIP15.89■□□□□ 0.13
SSH3-208ENST00000532181 NUP98P52948 1817 aa15.89■□□□□ 0.13
SSH3-208ENST00000532181 DLEC1Q9Y238 1755 aa15.88■□□□□ 0.13
SSH3-208ENST00000532181 H0YIN7 160 aa15.88■□□□□ 0.13
SSH3-208ENST00000532181 RGL2O15211 777 aa15.88■□□□□ 0.13
SSH3-208ENST00000532181 SLC4A2P04920 1241 aa15.88■□□□□ 0.13
SSH3-208ENST00000532181 RASSF7Q02833 373 aa15.88■□□□□ 0.13
SSH3-208ENST00000532181 KIF6Q6ZMV9 814 aa15.88■□□□□ 0.13
SSH3-208ENST00000532181 SYNE4Q8N205 404 aa15.88■□□□□ 0.13
SSH3-208ENST00000532181 ZNF622Q969S3 477 aaKnown RBP eCLIP15.88■□□□□ 0.13
SSH3-208ENST00000532181 SBF1O95248 1867 aa15.87■□□□□ 0.13
SSH3-208ENST00000532181 NPHP1O15259 732 aa15.87■□□□□ 0.13
SSH3-208ENST00000532181 ANKRD13DQ6ZTN6 518 aa15.87■□□□□ 0.13
SSH3-208ENST00000532181 TTLL6Q8N841 843 aa15.87■□□□□ 0.13
SSH3-208ENST00000532181 PLBD2Q8NHP8 589 aa15.87■□□□□ 0.13
SSH3-208ENST00000532181 RNF181Q9P0P0 153 aa15.87■□□□□ 0.13
SSH3-208ENST00000532181 COL11A2P13942 1736 aaPredicted RBP15.87■□□□□ 0.13
SSH3-208ENST00000532181 KIF3CO14782 793 aa15.86■□□□□ 0.13
SSH3-208ENST00000532181 PRELPP51888 382 aa15.86■□□□□ 0.13
SSH3-208ENST00000532181 TCIRG1Q13488 830 aa15.86■□□□□ 0.13
SSH3-208ENST00000532181 NUTM1Q86Y26 1132 aa15.86■□□□□ 0.13
SSH3-208ENST00000532181 CNBD1Q8NA66 436 aa15.86■□□□□ 0.13
SSH3-208ENST00000532181 BRIP1Q9BX63 1249 aa15.86■□□□□ 0.13
SSH3-208ENST00000532181 ATP5J2-PTCD1G3V325 749 aa15.85■□□□□ 0.13
SSH3-208ENST00000532181 NTSR2O95665 410 aa15.85■□□□□ 0.13
SSH3-208ENST00000532181 ISCA1Q9BUE6 129 aa15.85■□□□□ 0.13
SSH3-208ENST00000532181 NMRK2Q9NPI5 230 aa15.85■□□□□ 0.13
SSH3-208ENST00000532181 ZNF652Q9Y2D9 606 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms