RNA–Protein interactions for RNA: ENST00000532001.6

PTP4A2-213, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5

Gene PTP4A2, Length 911 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-213ENST00000532001 AMOTQ4VCS5 1084 aa11.75□□□□□ -0.53
PTP4A2-213ENST00000532001 PLEKHO1Q53GL0 409 aaPredicted RBP11.75□□□□□ -0.53
PTP4A2-213ENST00000532001 DCAF5Q96JK2 942 aa11.75□□□□□ -0.53
PTP4A2-213ENST00000532001 LSM11P83369 360 aaKnown RBP eCLIP11.74□□□□□ -0.53
PTP4A2-213ENST00000532001 CAMK2BQ13554 666 aa11.74□□□□□ -0.53
PTP4A2-213ENST00000532001 LINC00116Q8NCU8 138 aa11.74□□□□□ -0.53
PTP4A2-213ENST00000532001 NLGN2Q8NFZ4 835 aa11.74□□□□□ -0.53
PTP4A2-213ENST00000532001 ATG3Q9NT62 314 aa11.74□□□□□ -0.53
PTP4A2-213ENST00000532001 ASAP1Q9ULH1 1129 aa11.74□□□□□ -0.53
PTP4A2-213ENST00000532001 CD2APQ9Y5K6 639 aa11.74□□□□□ -0.53
PTP4A2-213ENST00000532001 NPC1L1Q9UHC9 1359 aa11.74□□□□□ -0.53
PTP4A2-213ENST00000532001 ADAMTS7Q9UKP4 1686 aa11.74□□□□□ -0.53
PTP4A2-213ENST00000532001 KIF13BQ9NQT8 1826 aa11.74□□□□□ -0.53
PTP4A2-213ENST00000532001 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.73□□□□□ -0.53
PTP4A2-213ENST00000532001 MRC1P22897 1456 aa11.73□□□□□ -0.53
PTP4A2-213ENST00000532001 IL13P35225 146 aa11.73□□□□□ -0.53
PTP4A2-213ENST00000532001 ITPK1Q13572 414 aa11.73□□□□□ -0.53
PTP4A2-213ENST00000532001 PPP4R3BQ5MIZ7 849 aa11.73□□□□□ -0.53
PTP4A2-213ENST00000532001 ZNF530Q6P9A1 599 aaPredicted RBP11.73□□□□□ -0.53
PTP4A2-213ENST00000532001 AMIGO3Q86WK7 504 aa11.73□□□□□ -0.53
PTP4A2-213ENST00000532001 MYH14Q7Z406 1995 aaKnown RBP11.72□□□□□ -0.53
PTP4A2-213ENST00000532001 C4AP0C0L4 1744 aa11.72□□□□□ -0.53
PTP4A2-213ENST00000532001 TJP1Q07157 1748 aa11.72□□□□□ -0.53
PTP4A2-213ENST00000532001 GPR162Q16538 588 aa11.72□□□□□ -0.53
PTP4A2-213ENST00000532001 MSL1Q68DK7 614 aa11.72□□□□□ -0.53
PTP4A2-213ENST00000532001 AEBP1Q8IUX7 1158 aa11.72□□□□□ -0.53
PTP4A2-213ENST00000532001 ZNF784Q8NCA9 323 aaPredicted RBP11.72□□□□□ -0.53
PTP4A2-213ENST00000532001 CNTNAP4Q9C0A0 1308 aa11.71□□□□□ -0.53
PTP4A2-213ENST00000532001 PER1O15534 1290 aaPredicted RBP11.71□□□□□ -0.53
PTP4A2-213ENST00000532001 EVI5O60447 810 aa11.71□□□□□ -0.53
PTP4A2-213ENST00000532001 ATP6V1AP38606 617 aa11.71□□□□□ -0.53
PTP4A2-213ENST00000532001 COL3A1P02461 1466 aaPredicted RBP11.7□□□□□ -0.54
PTP4A2-213ENST00000532001 KIAA1551Q9HCM1 1747 aa11.7□□□□□ -0.54
PTP4A2-213ENST00000532001 GNPATO15228 680 aa11.7□□□□□ -0.54
PTP4A2-213ENST00000532001 GRIN3BO60391 1043 aa11.7□□□□□ -0.54
PTP4A2-213ENST00000532001 MAP3K9P80192 1104 aa11.7□□□□□ -0.54
PTP4A2-213ENST00000532001 RC3H1Q5TC82 1133 aaKnown RBP11.7□□□□□ -0.54
PTP4A2-213ENST00000532001 SULT6B1Q6IMI4 303 aa11.7□□□□□ -0.54
PTP4A2-213ENST00000532001 SLC4A9Q96Q91 983 aa11.7□□□□□ -0.54
PTP4A2-213ENST00000532001 ARHGAP33O14559 1287 aa11.69□□□□□ -0.54
PTP4A2-213ENST00000532001 PHF14O94880 888 aa11.69□□□□□ -0.54
PTP4A2-213ENST00000532001 C1orf141Q5JVX7 400 aa11.69□□□□□ -0.54
PTP4A2-213ENST00000532001 YBX3P16989 372 aaKnown RBP eCLIP11.68□□□□□ -0.548e-10■□□□□ 9.7
PTP4A2-213ENST00000532001 MTHFSP49914 203 aa11.68□□□□□ -0.54
PTP4A2-213ENST00000532001 CABP4P57796 275 aa11.68□□□□□ -0.54
PTP4A2-213ENST00000532001 ANKRD13DQ6ZTN6 518 aa11.68□□□□□ -0.54
PTP4A2-213ENST00000532001 UBR2Q8IWV8 1755 aa11.67□□□□□ -0.54
PTP4A2-213ENST00000532001 FOSBP53539 338 aa11.67□□□□□ -0.54
PTP4A2-213ENST00000532001 AKAP4Q5JQC9 854 aa11.67□□□□□ -0.54
PTP4A2-213ENST00000532001 RTCBQ9Y3I0 505 aaKnown RBP11.67□□□□□ -0.54
PTP4A2-213ENST00000532001 BRCA1P38398 1863 aaKnown RBP11.67□□□□□ -0.54
PTP4A2-213ENST00000532001 C10orf71Q711Q0 1435 aa11.67□□□□□ -0.54
PTP4A2-213ENST00000532001 ZNF454Q8N9F8 522 aa11.66□□□□□ -0.54
PTP4A2-213ENST00000532001 SIPA1L3O60292 1781 aaPredicted RBP11.66□□□□□ -0.54
PTP4A2-213ENST00000532001 KCPQ6ZWJ8 1503 aa11.65□□□□□ -0.54
PTP4A2-213ENST00000532001 DIAPH1O60610 1272 aaKnown RBP11.65□□□□□ -0.54
PTP4A2-213ENST00000532001 RPS6KA4O75676 772 aa11.65□□□□□ -0.54
PTP4A2-213ENST00000532001 TRAPPC3LQ5T215 181 aa11.65□□□□□ -0.54
PTP4A2-213ENST00000532001 SMIM5Q71RC9 77 aa11.65□□□□□ -0.54
PTP4A2-213ENST00000532001 NLGN1Q8N2Q7 840 aa11.65□□□□□ -0.54
PTP4A2-213ENST00000532001 ADCY9O60503 1353 aa11.65□□□□□ -0.55
PTP4A2-213ENST00000532001 PXDNLA1KZ92 1463 aa11.64□□□□□ -0.55
PTP4A2-213ENST00000532001 MMP10P09238 476 aa11.64□□□□□ -0.55
PTP4A2-213ENST00000532001 NFATC2IPQ8NCF5 419 aa11.64□□□□□ -0.55
PTP4A2-213ENST00000532001 SLC52A2Q9HAB3 445 aa11.64□□□□□ -0.55
PTP4A2-213ENST00000532001 N4BP2Q86UW6 1770 aaPredicted RBP11.64□□□□□ -0.55
PTP4A2-213ENST00000532001 GYS1P13807 737 aa11.63□□□□□ -0.55
PTP4A2-213ENST00000532001 PSEN2P49810 448 aa11.63□□□□□ -0.55
PTP4A2-213ENST00000532001 CC2D1BQ5T0F9 858 aaKnown RBP11.63□□□□□ -0.55
PTP4A2-213ENST00000532001 ARHGEF1Q92888 912 aaKnown RBP11.63□□□□□ -0.55
PTP4A2-213ENST00000532001 ARFGEF1Q9Y6D6 1849 aa11.63□□□□□ -0.55
PTP4A2-213ENST00000532001 DPYSL4O14531 572 aa11.62□□□□□ -0.55
PTP4A2-213ENST00000532001 RNMTO43148 476 aaKnown RBP11.62□□□□□ -0.55
PTP4A2-213ENST00000532001 PTCD1O75127 700 aaKnown RBP11.62□□□□□ -0.55
PTP4A2-213ENST00000532001 CRKLP46109 303 aaKnown RBP11.62□□□□□ -0.55
PTP4A2-213ENST00000532001 BCL2L12Q9HB09 334 aa11.62□□□□□ -0.55
PTP4A2-213ENST00000532001 USP42Q9H9J4 1324 aaKnown RBP11.61□□□□□ -0.55
PTP4A2-213ENST00000532001 ATP10DQ9P241 1426 aa11.61□□□□□ -0.55
PTP4A2-213ENST00000532001 HMOX1P09601 288 aa11.61□□□□□ -0.55
PTP4A2-213ENST00000532001 RFC4P35249 363 aa11.61□□□□□ -0.55
PTP4A2-213ENST00000532001 TGFB2P61812 414 aa11.61□□□□□ -0.55
PTP4A2-213ENST00000532001 MTHFSDQ2M296 383 aaKnown RBP11.61□□□□□ -0.55
PTP4A2-213ENST00000532001 DMRTA1Q5VZB9 504 aa11.61□□□□□ -0.55
PTP4A2-213ENST00000532001 TK2O00142 265 aa11.6□□□□□ -0.55
PTP4A2-213ENST00000532001 C1QTNF8P60827 252 aa11.6□□□□□ -0.55
PTP4A2-213ENST00000532001 ADGRD1Q6QNK2 874 aa11.6□□□□□ -0.55
PTP4A2-213ENST00000532001 VSIG10Q8N0Z9 540 aa11.6□□□□□ -0.55
PTP4A2-213ENST00000532001 RNF166Q96A37 237 aaPredicted RBP11.6□□□□□ -0.55
PTP4A2-213ENST00000532001 KCNK17Q96T54 332 aa11.6□□□□□ -0.55
PTP4A2-213ENST00000532001 LGR6Q9HBX8 967 aa11.6□□□□□ -0.55
PTP4A2-213ENST00000532001 CCDC87Q9NVE4 849 aa11.6□□□□□ -0.55
PTP4A2-213ENST00000532001 NRXN2Q9P2S2 1712 aa11.6□□□□□ -0.55
PTP4A2-213ENST00000532001 SOS1Q07889 1333 aaPredicted RBP11.6□□□□□ -0.55
PTP4A2-213ENST00000532001 AFDNP55196 1824 aaKnown RBP11.59□□□□□ -0.55
PTP4A2-213ENST00000532001 GIGYF1O75420 1035 aaPredicted RBP11.59□□□□□ -0.55
PTP4A2-213ENST00000532001 INTS5Q6P9B9 1019 aaKnown RBP11.59□□□□□ -0.55
PTP4A2-213ENST00000532001 DNAJC10Q8IXB1 793 aa11.59□□□□□ -0.55
PTP4A2-213ENST00000532001 GAS2L2Q8NHY3 880 aa11.59□□□□□ -0.55
PTP4A2-213ENST00000532001 CYP19A1P11511 503 aaPredicted RBP11.58□□□□□ -0.56
PTP4A2-213ENST00000532001 ZDHHC16Q969W1 377 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms